Hdid000202.1
Basic Information
- Insect
- Hyposoter didymator
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold128243:3875880-3879331[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-13 4.8e-10 38.9 0.0 2 45 376 419 375 419 0.94
Sequence Information
- Coding Sequence
- ATGGCTTTCCAGGGAGAACAGCTGTTCTGCTTGCGATGGAACAATTATCAAGAGAACATTGTCGAAGTTTTCGACAAGTTGCTGATGGAGGAGACGTTCGCCGATGTTACATTGGCGCTTGATTATGGGGTCAACGTCAGATGTCACAAAATGGTATTGGCCGCTTGCTCGACGTATTTCGAAGGACTTTTCGAAGAATTACCCTGCCCGCATCCGATCGTCGTTCTCAAGGATATTTCGTATTCGGAGCTCAAAGAAGTCCTGGAATTCATGTACACCGGCGAAGTCCAAATCGCCGAGGACCATTTGCCCCAGTTCGTGAGAGTTGCCAACGTTCTCCAGGTCAAGGGTCTCATGGCAAAGAACGCCTCGTTGACCATCTCCAAAGTAAAGCCCGACAACAAGCAGGAAGCTGCTGCCGCTAGCCCCAGCCCCAGCACCAGCGACAGCCCAAGCACCAGCACCAACACCACGAGCCCGGACCCCGAACCCGTCCCCGAAACCGACGATGCCGTTCCCGGACCATCCTCAGCCCCACCTTCGACCAACTTACCCTCCACTCACGGACCCAAAAAACTCCCCAAAAAACGACATCAACGACCTCCTCCGATGTGGCCCATGACACCCGCTGATAGACACCGATATACACCCCCCGACATGGCCGCCTTACAAGCAGCCCTCACACACAAACACGCGCTCTACTCTTCTCACTACGACAACAGCTTCGAAACCGGACCCTCCACCAGCTCAAGGAAACGCAAAACTTCGGACAACAACAGAGCGAACAGAAATCACGACACTCCGATTCTCCGCACGGTTCTCGGTCAAGGCCACGTCGACAACTCAATCGCACAATCTCATTCAGACTCTCACGAATACCCAAGCCACAGCAACGATTCCACCAATTATTACGAAAACTATGACGCCAGACGCTCCAGCATGGACACCCCAGCAACCTTCAATGACCAACCTTCTTGTAGCTCGTACCACTACGATCCACCCATGATGGAAGAAGCTGACAGACGACCTTCGCCACCCTCTTGTTCCAACAAAAACCCACCAGCAACGATAACAAATCATGTACAAGCTCAAAGACCAGGATGGAAACGCTACAAACAATACACGCCAGGCGACGTATCAAACGCAATCGAGTCTGTAAGACGAGGGATGAGCGCACTCCAGGCTGCCCGGAAGTTCAGCGTTCCCTCGAGAACCCTTTACGACAAAGTTAAGAAACTTGGTATAACAACGTCAAGACCCTTCAGACGCAGTTCCACTTGCACCAGCGCTTCGTTCCCGAATGGAATCGGCTGCAACGTCAATGGAAGTATCTACGCAAATGTTTCAATGGTCGACAACAACAACAGCACCGTACTAATTGATAATCCCACTGCATTACTCGAGACGACTTACGGCGAATCGCGCGACGAATCACGCGACAGAGAATCATTTATCGAAGCCACGCGAGCCAGCCGAAGTCCTTATCAACCGATACCACTTTACGCGCACAGCCAAACATCGATCGAACGAATTCCTCGCCAAGAAACACCCGACATGACAGACCAAGTTCAGGATCTTTCGATAAATCGAAGACCGACCGAGGAAACTGACGCATTCTCCCCGAACGTCAAAATTAAAGAGGAAAAATGA
- Protein Sequence
- MAFQGEQLFCLRWNNYQENIVEVFDKLLMEETFADVTLALDYGVNVRCHKMVLAACSTYFEGLFEELPCPHPIVVLKDISYSELKEVLEFMYTGEVQIAEDHLPQFVRVANVLQVKGLMAKNASLTISKVKPDNKQEAAAASPSPSTSDSPSTSTNTTSPDPEPVPETDDAVPGPSSAPPSTNLPSTHGPKKLPKKRHQRPPPMWPMTPADRHRYTPPDMAALQAALTHKHALYSSHYDNSFETGPSTSSRKRKTSDNNRANRNHDTPILRTVLGQGHVDNSIAQSHSDSHEYPSHSNDSTNYYENYDARRSSMDTPATFNDQPSCSSYHYDPPMMEEADRRPSPPSCSNKNPPATITNHVQAQRPGWKRYKQYTPGDVSNAIESVRRGMSALQAARKFSVPSRTLYDKVKKLGITTSRPFRRSSTCTSASFPNGIGCNVNGSIYANVSMVDNNNSTVLIDNPTALLETTYGESRDESRDRESFIEATRASRSPYQPIPLYAHSQTSIERIPRQETPDMTDQVQDLSINRRPTEETDAFSPNVKIKEEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00829409;
- 90% Identity
- iTF_00829409;
- 80% Identity
- iTF_00828900;