Basic Information

Gene Symbol
kn
Assembly
None
Location
scaffold149:1141567-1166648[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-50 1.3e-46 159.0 0.0 39 135 217 313 209 328 0.95

Sequence Information

Coding Sequence
ATGAGCGACCTTGAAGGCAAAGGCAACGTGTCACGTCCGCCAGGTGTCGGCAGCCACGAAATCATTGGTAGCCGTGAAATAATAGTGGGAGACTACTCGCGGGATTCTGTTAGCTGGTGGCAGCAGCTGCAAGAAGGACGAAGCCTGTTGCCTCAGGAGGGTTCTTACGGCCTCACCACGCGTTCCGACGAGTGGAGCGGTCTCCTGCCCAGCTCCACTATCGTGGGTGCTGGGGGGTCACCATGGTTGGGTTTGGGTGCCGGCGGTGGAACCGGTGCAACCGGAGGTGGTGGCAGTCCCGTAGAGCTCGAAGGACACTGGGGCCGAAAGTTGTATGGTGCGAGCGTTGCACCACCTCCGCCCCCGCCTCATCACCATCCACGAGCGCCACTTGTTTTTGCGCCCCAGGACATGCGGCAGATCCTCAAGGAGGAACCGGTGCCGCGTGCCTGGCCACAGCCGACACTTGCTGACAATGCATCTTTTCATAAANGACACTGGGGCCGAAAGTTGTATGGTGCGAGCGTTGCACCACCTCCGCCCCCGCCTCATCACCATCCACGAGCGCCACTTGTTTTTGCGCCCCAGGACATGCGGCAGATCCTCAAGGAGGAACCGGTGCCGCGTGCCTGGCCACAGCCGACACTTGCTGACAATGCATCAGTCGGAATCGGCAAAGCACACTTTGAGAAGCAGCCACCGAGCAATCTGCGGAAGAGCAATTTCTTTCACTTCGTGATTGCCCTTTACGACAGGGTCGGTCAACCGATCGAGATCGAGAGAACAGCCTTCATTGGTTTCGTGGAGAAGGATCAAGAATCCGAGGGTCAAAAAACCAACAACGGCATCCAATACAGGCTCCAGTTGCTCTACGCCAATGGCCTCAGGCAGGAACAAGACATTTTCGTGAGGCTCATCGACTCCTCAACGAAGCAGGACGCTCGGCGGCATCGTCGCGGCGACGACGGCGACGACGACGAAAACGCTATAACCTGTGCTTCTCGGGGACCCTTGACGCCGACCCTCGGAGTCCTTGGCATCTCCTCCGAGACCGACAACGACATAACCACCCCGCGATATCCATCGGTGGCTGTGTGTATTATGTACGAGAGAAAGAAAAGGAAAGAAAACACTCAAGCGACTGTGCTCATTCGGTGTAACACCATCAAATATTTCAGAGTACCGTTCACTGTTGCCAAGTCTTGGAAACATCCGGAGGATCTCTTCTGGGATTTCGGCTCGCGATAG
Protein Sequence
MSDLEGKGNVSRPPGVGSHEIIGSREIIVGDYSRDSVSWWQQLQEGRSLLPQEGSYGLTTRSDEWSGLLPSSTIVGAGGSPWLGLGAGGGTGATGGGGSPVELEGHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPTLADNASFHKXHWGRKLYGASVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPTLADNASVGIGKAHFEKQPPSNLRKSNFFHFVIALYDRVGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYANGLRQEQDIFVRLIDSSTKQDARRHRRGDDGDDDENAITCASRGPLTPTLGVLGISSETDNDITTPRYPSVAVCIMYERKKRKENTQATVLIRCNTIKYFRVPFTVAKSWKHPEDLFWDFGSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-