Hdid001282.1
Basic Information
- Insect
- Hyposoter didymator
- Gene Symbol
- retn
- Assembly
- None
- Location
- scaffold198:2359635-2461193[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 1.6e+04 -3.8 0.1 68 82 212 226 204 226 0.67 2 2 4.4e-26 1e-22 80.2 0.0 2 89 233 318 232 318 0.96
Sequence Information
- Coding Sequence
- ATGGAGATAAGCGACGAATATCAGGACATGGGAAATCCCGGTGGTGGAGTTGCAATGGCGAACATACCACTCGGGCATCATCGACAACAATCGCCGGACAGTCCCATGTCTCATCAGGATGAAGATCTTTCCGATCCGGACCTCCAGGACGAGGAAAGCGGCGAAGAATTGCCCCAGCAGCCGCTCCAAGCCAACAATCATTCCTCGGAAAACACCACTTCCGGTCAAGCCACGACACCAACCCCTCTGACGCATCTCAACAGTCTCATGACCGGCCACCATCAACACTTCTTGTCCAAACTCAAAATGGAGAACGACATGGACATTTTGAGTAACAAGAGCGGCCTCGAGGCACTTCAGGCCGCAATGGGTGGCGGAAATTTTAATCTGCCATTCTCGTTTCCAACACCGGCTGCTTTTCTCACGCCACAACACAATTCCCATAACAATCATCAACAAATCGGGGCTGGGGCGGGTGGCGGAGGTGGCGGTGGATCGGGCGGCAATGCCCTTACGTCATCCGCCAGCTCCCACTCGAGCGAATCGTCTCAGGGTAGCGCGCGTAACAGCAGCGACGTTCGCGATCCCGCTGGACACAACTCTCAGAATAATTCATCAAATTCGCATCAACAACAGACCAGTTGGAGCTTCGAGGAGCAGTTCAAACAGCTGTACGAGATCAATGACGACCCCAAACGAAAGGAATTCCTTGATGATCTATTCAGTTTTATGCAGAAACGAGGAACACCGATCAATCGTTTACCAATCATGGCTAAATCGGTCCTCGACCTGTACGAGCTCTTTCAATTGGTCATAGCGCGGGGTGGTCTAGTCGATGTTATAAACAAGAAACTCTGGCAGGAGATCATCAAGGGATTACATCTGCCTTCTAGCATCACATCCGCTGCATTCACCCTTCGAACCCAATATATGAAATATTTGTATCCGTACGAGGGTGAAAAATTGGGACTCTCCACACCGTCAGAACTCCAAGCAGCCATCGATGGCAATCGACGCGAAGGACGACGAAGCAGCTATGGAACTTACGGGGGCGGAGGTGGCGACAGCATGTTGCAAAGGAATCCGCACACTCCTGTCTCGATGGCTATGCATCCACAAATGTCACCCTTGTCCCTAGTCTCCGCGGTGGCTGGCGGTCAACATCACGGTTCCCAGTCACTGGTTAATGGCAGCGCAGCTCACACACCGATGCCACATCATCCTCATCATCCTCAGCATCCTTCAGGCCCGATCGGTCCCATACCAGGCCTAGCACCCGCTGAATTCGAAGCTCGTATGGTCGAATACGTGAAGTTGTTGAACAAAGAGCTCAGAAATGCCGGTGGAGCCACACCACCACCGATTATCCACCGACAGGGCAGCGCATCTCCACCTCCTAGCACACCCCCACGCGACGCATTCAGTGCTCTCGAAATGTCACGATTAACACTCTGGAACATGTACAACAACAATACACTCTATCCTGGGGTCGGACATCAGCCACCCTTATCTCCACAAGCCTCCAACTCACCGCATCGACAAGCCGCCAGTCCTGAGCCCCAGAGAGAAGCCCTGGATCTTGGACTCCGATCATCACCACTTTCCTCCTCACCTACAAGACACAGCCCACCCTCCTCGAGCAGTAGCATTCTCGTCAAGAGGGATCCAGAGTTCGCAGGAACACCTGGTCCACCACCTGCCAAGAGGCTACTTTCGGACGACGATAGCCCCAATGAAAAACACGTTCCAGCTTTGGCAGGCACTCATATCAAAATCTCCAATCGCGGTGACGGACGGAACGGCGATAATTCCTTGGTCGTCAGTATGGAGCTTAATGGAGTAATGTACCAGGGTGTTTTGTTCGCACAGACAGACGGCAGAAGTACGACGACCGCTACTAATAATAACACAAAAGCGGCGAGAAGTATCGTCTCGTGA
- Protein Sequence
- MEISDEYQDMGNPGGGVAMANIPLGHHRQQSPDSPMSHQDEDLSDPDLQDEESGEELPQQPLQANNHSSENTTSGQATTPTPLTHLNSLMTGHHQHFLSKLKMENDMDILSNKSGLEALQAAMGGGNFNLPFSFPTPAAFLTPQHNSHNNHQQIGAGAGGGGGGGSGGNALTSSASSHSSESSQGSARNSSDVRDPAGHNSQNNSSNSHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELFQLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEGEKLGLSTPSELQAAIDGNRREGRRSSYGTYGGGGGDSMLQRNPHTPVSMAMHPQMSPLSLVSAVAGGQHHGSQSLVNGSAAHTPMPHHPHHPQHPSGPIGPIPGLAPAEFEARMVEYVKLLNKELRNAGGATPPPIIHRQGSASPPPSTPPRDAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASNSPHRQAASPEPQREALDLGLRSSPLSSSPTRHSPPSSSSSILVKRDPEFAGTPGPPPAKRLLSDDDSPNEKHVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDGRSTTTATNNNTKAARSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -