Hkah003609.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hyposmocoma kahamanoa
Gene Symbol
nfxl1
Assembly
GCA_003589595.1
Location
NW:1134032-1149002[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1 1.3e+04 -8.0 5.6 15 19 134 138 133 138 0.81
2 18 0.037 4.9e+02 0.5 0.4 4 10 169 175 168 175 0.96
3 18 8.1e-08 0.0011 18.5 15.3 3 19 186 202 183 202 0.95
4 18 3.8e-09 5e-05 22.8 13.2 3 19 239 255 237 255 0.92
5 18 0.006 79 3.0 3.1 6 12 280 286 279 286 0.90
6 18 7.2e-10 9.4e-06 25.1 13.5 1 19 290 308 290 308 0.99
7 18 7.4e-07 0.0097 15.5 19.1 3 19 345 361 337 361 0.86
8 18 0.00015 2 8.1 16.6 2 18 396 412 395 413 0.91
9 18 8.3e-09 0.00011 21.7 17.3 1 19 422 440 422 440 0.99
10 18 0.00012 1.5 8.4 6.4 9 19 488 498 486 498 0.89
11 18 0.0097 1.3e+02 2.3 8.4 3 12 509 518 508 518 0.90
12 18 0.21 2.8e+03 -2.0 3.3 14 18 547 551 547 552 0.85
13 18 0.13 1.7e+03 -1.3 0.2 8 12 568 572 567 572 0.79
14 18 3.1e-06 0.041 13.5 4.7 1 11 588 598 588 599 0.98
15 18 6.7e-06 0.088 12.4 16.0 3 18 629 645 628 646 0.84
16 18 1 1.3e+04 -5.3 2.4 9 13 652 656 651 656 0.74
17 18 0.24 3.2e+03 -2.1 0.8 5 10 663 668 663 668 0.93
18 18 6.6e-07 0.0086 15.6 10.5 1 16 687 701 687 707 0.90

Sequence Information

Coding Sequence
ATGGCACGGAGATACCGCGATGCCGCAGCGAAATTGCAGCAAAATGTCCAACGGCATCTGAAGGACATGAAAGACCTTTCATCTTCCGACGATGAAGATCCCTATGAGACCAGCGTCCTCGACGGAGTCTTTCAAAGCTATTGGAGCGGTGGCGGCGACTCTCACCTGCTTAACAGAACCAAGAACCTTCTAGAAGAAGCCATAAGCGGTCGGCCCGTCACCTGCCTGATTTGCATCGGATCTATTAAAAGAGCGGACGCCATCTGGACCTGCGGCCACTGCCACTCTTACTTCCACCTATCCTGCATCCAAAAATGGGCCAACGACTGTGTTAGTTTAAAACCCGAAGAAATCCAAAGTCCAATTACGGTGTTCATCCCTAAAAAAATAGAATGGTGCTGCCCTAAATGTAGACATTCGTATTCTAAAGAACAAATACCTCATAAGTACCGCTGCTTTTGCGGCAAAACCAATGATCCACCTGTCCATCCTTGGTTGATACCTCATTCTTGTGGGGAAGTATGTGAGAAAAGACTGTCTTATTCTGGTAATTGTCAGCATAAGTGTTTGCTGCTCTGTCACCCTGGCCCATGCCCACCGTGCCCTCAGACTATAGATGGAGCATGTTTCTGTGAAAAAGATCGTAGAAGAGTAAGGTGCAGTGCACCGAGGTGGTCTTGTGGCAAACAGTGTAAAAAATTACTCCTTTGTAAGTCCCATAGATGCGAAAATGTTTGTCATGAAGGAGATTGTCCTCCATGCAGCTACACAAGCATACAGTCCTGTCAATGTGGTTTAGAGAAAGCAAAACGTCCCTGCAATGATCCAGTATGGCAATGTCAGAAACCATGTCATAAACCTTTTTCATGTGGTTATCACAAATGTGAGAAAATTTGTCATACAGGGAATTGTGGCACATGTCCCAATTCTGGCATGCGCTCCTGTCCTTGCGGTGCTAATCAACACCTTGTTGAATGTCCAGATACAATTGAAACCTGTCTTGGAACCTGTGGTAAGAAACAGGAAGGTTGTGAACATAATTGTCCAGAAAAGTGCCACAAAGGACCGTGCCCACCTTGCCAGGTTTTAATACAAAAGAAATGTCAATGTTCGGCACATACAAGATCTCTGCCTTGCAGTAAGGATTTTAAATGCGACACAAAATGCAGAGGTATGAGACCTTGTAGAAAGCATCCATGTGCCCGGAAATGCTGTAATGGTAACTGTCCTCCATGTGAAAAGATATGTGACAAACTCCTGCAATGTGGCAGACACAAATGTACCACAGTCTGCCATCACGGTCCATGCTATCCCTGCCCTAGAGAGTCTAAAGTGACTTGTCGATGTAAAGAAACTTATATTACTGTGCCTTGCGGTAGAGAAAAGCAAACAAAACCACCGAAATGCAATCTgccttgtaaaattaaatataaatgtggTCATGTTGAAGAAAACAAACATTCATGTCATTTTGGTGACTGCCCACCGTGCAAAGCTATTTGTGATAAGCAATATCCTAAATGCGAACATAAATGCAAAGCAACATGTCATGAATTTGTGGCTGTAGTGTTCAAACAGATTGAAAAACCAGCTACTCCATGGGAAGTTCAGCCTCCTAAGACGAAAATAATGACTTTGGAATGTCCTCCTTGCGAGACACCTGTCCCTGTTATTTGTTTTGGAGAACATGAGACTGAAAACCAGCCATGTCATTCAGCTAAACGCAGATCATGTGGTCGAGAGTGTGGACGGCCATTATCATGTGGCAATCATACTTGTTCTCTTATCTGTCACATGTATGCTTTGGATCCTAATTATCCAAATGTGCCTTATATTTGTAGGCAATGTAATAAAGATTGTCTTGCTCCCCGTCCAGAGAAATGTACTCACAAGTGTTCGAAACGAGTTTGTCACCCTGGGCCTTGTCCTCCTTGTGAAATATTTGAACGAGTTCCTTGCCATTGTGGAGTGACTGAGCTATATTTGCGATGCAACGAGCTATGTACGGCCTCTGATGAAATGTTGTCATGCAAGCAACAATGTCCTCGAAGCCTGGATTGTGGCCACAGGTGCAAAACCACTTGCCATCCTGGTAATTGCGCTAGTGATCAAGTGTGTATGAAGAAAACTAAAATCCACTGTTCTTGTGGTAATTTAAAGAAAGAAGCACCTTGTAATTTGGTTAGGAAAGGTGAAGCTAAAGTTGCTTGCGATGATTCTTGTGAAGCTAAGAAAATTGTGACAAAGCTAGAGAAAGAAAAGGAACAAGAAAGATTGAAATTGCTTGAAGAAGAGAAAAATAGAAAGGAGTTAGAAGAGTATGAATGGAAACTAAGTGgtaagaagaaaaaatataaagagaaAAGAGTCATCATCAACAAGGATGATCGGAATGTATTGCAAAAATATTGGATTctatttttgtctttttctgTTGTTTGTTGGTTAATTGGTCTACTTGCGCTGACGGGTCTGTTGTGGGGTTGCACCAACCCGTTCATCCGGAAGGGCACACAGGGTCTTTCCAATGTGCACGCCACCACGCGGTTTGGACAATTGCACGCAGAGCTGTCATTCCTGCTTACAAACTGGAAGTATGTGATCCCGTTCATGTTGAACCAGGCGGGATCCGTCACGTACATAGTGGCGATGCAACGCGCTCCCCTGACGCTGGCGGTGCCGGCCGCCAACAGCCTGGCCTTCGCGGCCACCGCGCTTACCGGCGCCGCCATCGGCGATGAGGAACCCCTTGATACAAAGTCTATTATAGGCGTCATAGCGATTGTGGCAGGCACCGCTCTCTGTTGCTGGGATAAGGTGGAATGA
Protein Sequence
MARRYRDAAAKLQQNVQRHLKDMKDLSSSDDEDPYETSVLDGVFQSYWSGGGDSHLLNRTKNLLEEAISGRPVTCLICIGSIKRADAIWTCGHCHSYFHLSCIQKWANDCVSLKPEEIQSPITVFIPKKIEWCCPKCRHSYSKEQIPHKYRCFCGKTNDPPVHPWLIPHSCGEVCEKRLSYSGNCQHKCLLLCHPGPCPPCPQTIDGACFCEKDRRRVRCSAPRWSCGKQCKKLLLCKSHRCENVCHEGDCPPCSYTSIQSCQCGLEKAKRPCNDPVWQCQKPCHKPFSCGYHKCEKICHTGNCGTCPNSGMRSCPCGANQHLVECPDTIETCLGTCGKKQEGCEHNCPEKCHKGPCPPCQVLIQKKCQCSAHTRSLPCSKDFKCDTKCRGMRPCRKHPCARKCCNGNCPPCEKICDKLLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYITVPCGREKQTKPPKCNLPCKIKYKCGHVEENKHSCHFGDCPPCKAICDKQYPKCEHKCKATCHEFVAVVFKQIEKPATPWEVQPPKTKIMTLECPPCETPVPVICFGEHETENQPCHSAKRRSCGRECGRPLSCGNHTCSLICHMYALDPNYPNVPYICRQCNKDCLAPRPEKCTHKCSKRVCHPGPCPPCEIFERVPCHCGVTELYLRCNELCTASDEMLSCKQQCPRSLDCGHRCKTTCHPGNCASDQVCMKKTKIHCSCGNLKKEAPCNLVRKGEAKVACDDSCEAKKIVTKLEKEKEQERLKLLEEEKNRKELEEYEWKLSGKKKKYKEKRVIINKDDRNVLQKYWILFLSFSVVCWLIGLLALTGLLWGCTNPFIRKGTQGLSNVHATTRFGQLHAELSFLLTNWKYVIPFMLNQAGSVTYIVAMQRAPLTLAVPAANSLAFAATALTGAAIGDEEPLDTKSIIGVIAIVAGTALCCWDKVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091368;
90% Identity
-
80% Identity
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