Hkah002041.1
Basic Information
- Insect
- Hyposmocoma kahamanoa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003589595.1
- Location
- NW:9448411-9735285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-15 6.6e-12 44.5 0.0 1 38 335 373 335 376 0.95 2 2 1e-18 7.5e-16 57.1 0.0 1 43 544 587 544 589 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCTTTCGTCCGGTGCCAACAGGAACGTCGCGCTATACGCAAGGAGCTCCAGCGCTGGACCAAAAACATGGTTTACATACTCGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAAATATACCAGGACGGGTTAATACCAAAACGGAACGACGAGATATCCAGCGACGACGAGTCCATGCCTGCCACCGACCCCCAGCCCGCGCTCAAGATAAAGACTATAGAGGAAATCAATGCGCCCGACGAGGCGGCGAAAGCGCCCGAAGGCAATACGGAGAAAACCGAACGCCGAGAGACGATTCTAGAAAGTTTGATCAAGAGGCCTGCGACGCAGCCGAAGTTGGAGATGGTGGAAGAACCCACGGACTGGAAACCGCCAGACAAATGCTACTTCTGCGTAGACGGGGAACGCGCTGAACCGACGGGGGAAAGGCAGGCGGCCGGCGCGCATAGTCCAGCCTCAGAGTCGGACAGCTCTTCAGTCTCCGGAGCGAAGAGTCCTGCAGCCTCGCAGCCCCTACTCCAACACCTCCAGCTGATGCAGCTGCAGAATCCTCAACTGGCGCAGGTGAGCGCCCCAGAGCAGGACCCGTCAGATCAGGCCTTGCAGCAACAAATTGAGCTATTTCGCCTCATGCAGAACCCACAGGCTTTGGCTCAGTTTCAGCACGTGGTGGCGGCACTGGCGACGTTAGGAGCGGGTCTGGGCGCAGGCTTGATGCAGCCCGCCATGTCGCCGGCTTGGCTCGTCCAGCAGCTGGTACAGGCAAGACAAAATGCCGACAGACTCCCAGAAGTGGGAGAAAAGCCGGCTCCGAGCTCGTCCCCAGCCCTTGCGGAGCAGCCCTTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGTGGGACCCCACCGCCCGATGGCAAGACCTTAGACAATACCAGAGCGAAACGTGGCATGTTGGAGAGCAGCAGCAACAGTGCGGCAAAGCGAGCTTACACGGATGATGAACTACAGTCAGCCTTGAGAGACATCCAGTCAGGACGACTGGGCACACGTCGGGCGGCAGTGATCTACGGCATCCCCCGCTCCACACTCCGCAACAAGGTCAACAAATTCGGTCTTATCTCCGACCACCACGACTCTGAAGCCGACAGCGATCCCGAACGCGCCGATGATACCCCGCCTTCAGTCATCCTCAAAATACCAACCTTCCCACCTCCAGATGAGAAATCGCCTTCTCCTGCGACACCCATAACACCGGTAACACCAATCACCCCTCTTATTCCCCCACAGCCTCCTCTTAATCCTCCTTCACAACTCCTTCTTCCACCATCAGTCTACGCGGACGCACCATCATCGCAACACCTCTTCACCTCACTGAGCGATGTCATCGCCAAAAGTATCAGCCAGAAATTCCAAATAGACCGGCCCATGGATAGACCACAGCCTGATCTCTCTTTCATGAGACCTGATAGACACGTGTCTGTTATCAAAACACCGCCAGATACCAGGAGCTACCACCATCCCGTTCCAAGCAATTCCAAATCGCAGGCGAACAACAATGGTCAACCAGCAGCTGGCGGCAAAGGAACGCGACCCAAAAGAGGGAAGTACAGAAACTACGACAGGGATAGCCTTGTTGAAGCCGTCAAAGCTGTACAGAGGGGTGAGATGTCTGTGCACAGAGCTGGCTCGTATTACGGAGTTCCTCACTCGACTCTGGAATACAAGGTGAAGGAGCGACATCTGATGCGGCCTAGGAAGCGAGAGCCGAAACCTCAACAGGAGGTGAAACCGCAACCACCGAAACCGCAGCCTCCGAAACCGCCTACGAAGCCCTTTACAAACGGCATGAATGGACCTGACACTCCGGGATATCCACCCGGATATCCCTTCTGGCCGGGCGCACAGTTTGCTCCACCGCCCACACCAGAACTCTACGCTTCGCAAATGATGCGTCGATTGCGCGAGGAAGCCCCTCCGCCATCGAATGGTTTCCTCGAGGGTATAATACGGTCGAGCCTCGAAAGGCCGGGAGCGTTGCTGCAGAGATTAACAACGGAGCCTCGACCGCCGATGACAGAATCCTCGAGTTTACTACGGCGATTGACAGGAGAACCAGATGGATCGCCTCCAGCGCGGCGTCCTCGACTCGAAAGTTCAGATCATCAGCTGGCGGCCGACCTTCGCGAGGTGGTGCAAAGAATCCGCGCCGACAAAATGCGGCCGCGGAACGGCACACCAACTCCCCCTGCACCTTCCGGACAGGACGTGCTGTCCCCCCCGCCCGCGCCCACTGCGCCCCCCGATCGCGCCTAG
- Protein Sequence
- MAECSFVRCQQERRAIRKELQRWTKNMVYILGLERVAEELMGRRKWKIYQDGLIPKRNDEISSDDESMPATDPQPALKIKTIEEINAPDEAAKAPEGNTEKTERRETILESLIKRPATQPKLEMVEEPTDWKPPDKCYFCVDGERAEPTGERQAAGAHSPASESDSSSVSGAKSPAASQPLLQHLQLMQLQNPQLAQVSAPEQDPSDQALQQQIELFRLMQNPQALAQFQHVVAALATLGAGLGAGLMQPAMSPAWLVQQLVQARQNADRLPEVGEKPAPSSSPALAEQPLDLSAKSTSSTSGTPPPDGKTLDNTRAKRGMLESSSNSAAKRAYTDDELQSALRDIQSGRLGTRRAAVIYGIPRSTLRNKVNKFGLISDHHDSEADSDPERADDTPPSVILKIPTFPPPDEKSPSPATPITPVTPITPLIPPQPPLNPPSQLLLPPSVYADAPSSQHLFTSLSDVIAKSISQKFQIDRPMDRPQPDLSFMRPDRHVSVIKTPPDTRSYHHPVPSNSKSQANNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPQPPKPPTKPFTNGMNGPDTPGYPPGYPFWPGAQFAPPPTPELYASQMMRRLREEAPPPSNGFLEGIIRSSLERPGALLQRLTTEPRPPMTESSSLLRRLTGEPDGSPPARRPRLESSDHQLAADLREVVQRIRADKMRPRNGTPTPPAPSGQDVLSPPPAPTAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -