Basic Information

Insect: Hypomecis punctinalis
Gene Symbol: -
Assembly: GCA_949316475.1
Location: OX438804.1:25246537-25282050[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7.3e-05 0.008 17.9 3.6 1 23 391 414 391 414 0.96

2 7 0.00015 0.016 17.0 3.3 1 23 722 744 722 744 0.98

3 7 0.00027 0.03 16.1 4.2 1 23 749 771 749 771 0.98

4 7 9.4e-06 0.001 20.7 0.7 1 23 777 800 777 800 0.93

5 7 2.3e-07 2.6e-05 25.8 0.9 1 23 806 828 806 828 0.99

6 7 0.0085 0.93 11.4 7.2 1 23 834 856 834 856 0.99

7 7 2.9e-06 0.00032 22.3 1.2 1 23 862 884 862 884 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7.3e-05	0.008	17.9	3.6	1	23	391	414	391	414	0.96
2	7	0.00015	0.016	17.0	3.3	1	23	722	744	722	744	0.98
3	7	0.00027	0.03	16.1	4.2	1	23	749	771	749	771	0.98
4	7	9.4e-06	0.001	20.7	0.7	1	23	777	800	777	800	0.93
5	7	2.3e-07	2.6e-05	25.8	0.9	1	23	806	828	806	828	0.99
6	7	0.0085	0.93	11.4	7.2	1	23	834	856	834	856	0.99
7	7	2.9e-06	0.00032	22.3	1.2	1	23	862	884	862	884	0.97

Sequence Information

Coding Sequence: ATGAGGACTGTTGAAGCGCATTTATTAGAAGATAAAATGGACGAAGCAGTGACGCACTATATAAACACACATCACCCAAGCGAGCCAGTTCATATAGATACTAATGGTATACCAATGACGGTGCAAGACGATGGTGCAGGGCGAGTCACTATAATGCACCAGCAGACTTATACTACTCAAATGTGCAGACAAGTATCAGTGACGGAGCAAGTGGGCGATGGTCCGTGGGGAGAGGAGCTGCTGGAAGGGCCGATAGCGGCCATCGTGGCACACTTGCAGAACTCGCGACACCATCCTCCACCTCATCATAAGGTGGCACAAGTAAGAACTGATGTTGATACGTCAGTAATCCTGGATAGCACTATGCGATTCAATGGGCAGAGTTTGGAACAACAAGGCGAGCCAATAGTGGTGCAGCTGCCTCCGATGCAGACCCTACCTCCTCTACAGGACATGAAGCGCTGTGCAGATTCCGACTGGTTtactgataaaaacaaaaagcaGGATGATCAGTCCATGCTCCAAGACTCGGACAGCCAAGTCCTTGAGATGGCGAACTCATCTCCAGCTCAACATAAGCAGCAGAGCAGGAAGAGTTTACCACACAAAAAGCGGATATCTCGGAAACTGAAGAGGAACAATGGGAACAGTACTCCACAACAGGATCAACTGGTAGTGATAAACTGCAACGAGGCGGTGGCGGGGCCGCAGGAGCAGGAACAAATATTACCAGACAACTACGTGACCGTGGCGCACACGCACCACATGCCGCACGAGGTGCGTCCGGTGCTGATCTGCCAGATCTGCGGCGAGTACTACGGCGAAGAGCAGCTCAAATTCTACCATCATTTACGGCAACACTACGAACCCCACACCATCATCATCGAGAACCCCGTGCCAGACCTGCCGTGTGACAAGatGTCCTCCAACTGCATAGTGGATAATGTGGCGACGCTTCCAGACTCCATCGTAGAGCTATCTCTCGAGAACACGGTTCCAAAAACCTTGTACCAGCCCATAGACAAGCACATACTCTACACGTCGAGCGATAAAACGCTCACCTACAACACTAATAAGATGCAATATTCAATGGCGAGTATGGAGAAAGAACCGCCGCCCGTAGAGGCCGATAAGGCGGACCTCTACGAAACTCTGGATAAGCTTGAGCTGTACAACTGCGGCAAGTGTACGCGCACCTTTAGGAAACAGAAGCATTTCGAGGCGCATATGAGGGACGCGCACCCTCCTACTAAGTGTGAAGACATGGGCGAATTCAGCGAGCCAGAAGACCTAATGGCGGGTATTCAAGTGTGTGTAGGGGGGGAGTACGACGGCGCTCCCCCCTCCGCTCCCCCCGTGCCCCCCGCGCCCCTGCTGCCGCACCTCACCGTCGACAACGGCCACGTGCACCAGGACCACACCTGGTACGGTCGCGCGGGGCAGGGCGGCGGCGGGCCGTGCGGCGGGTACTGCAGCGTGTGCGCGCGCGACCCCGACACGCATTACAAACTGCTCAAAGAGGAGGTCCTACAAAGGATATTCGACAGTGAAGTTTCGGACAATGCCAATTTCGCCGACAACATGATATCCGATCACGATGTCGGTGACCAGGATCCTAATCATGATCATGACAACGATCACGGTCACAATGACCACGGTCACGGTCATAATGATCATGGTCACGGCCACAACGATCATGGTCACGGTCATAACGAACACAGGCACGGTCACGAACAAGAATACAAACACAACGAGCACAGTAACGACCATAATGAACAAATACATAGCCATAATGATCACCAAAATCACCAAATGCACAACGATCATACACAAATGCTCAACGAACATTTACAACACAGTGATCACAGTCAAAATTCCCAAGAACACAATGAGCACCATCACAACGAACAAAGTCATCACGACGACGGTCACGATCATAATGACCATAGCCACGATCATAATGATCATAGCCAAGAACATATTGATCATAGTCAAGAACACGATCCAAACGATGAGGATTACGCGCCCATTAGAGAGCAAAAGCTAAGAAAATCGCATACAATGGGCCAAGAGCAGGTTGATCATGGCCAAGAAAACGTTGAAAGTGAAGAGCATATCACGCTAATTCGACAATCAAGCAAGACAAAAGTGCAGGTGAAACTCTTCAGTTGTTCGAAGTGCGACCGCGTATTTTCCCATAGAAACAGTTTGTTGTACCATCTGCTATCTCACGGGGGCAAGCAACACACGTGTCGCGAGTGCGGGAAGGATTTCTATACGCATAACGCGTTAAAGATCCACCGTCGCGTGCACAACAACATCCGCCCTTACAAGTGTGAAACCTGCGGCCGCGAGTTCCGCCAGTGGAGCGACCTCAAATATCACAATATTTCGCTACATTCCGATAAGAAACACTTCAAATGCGAGTACTGCGGGAAGGAGTTCGCGCGGAAATATTCGTTGAACCTGCACGTGAGGATCCACACCGGGGAGAAGAACTACAAGTGTGACTACTGCAGCAAAACCTTCCGCTGCTCCTCCTACAAACTGACGCACATGCGGACACACACCGGCGATCGTCCCTACAAGTGCGACGAATGCGACAAACGGTTCCGTTCGGCCTTCGACTTGCGTCGCCACTCCCTCATACACGACAAAATACGCAACCGATTCGACGAACACAAACCAAAATCCAAAGAAAACAACAAAAAGTCCAAAATGACTGACATCAAGGAGGAAATAGAGGAAAAAATCGAACTAGAACCGTCGCCTAAGAAAATCAAGCAAATCGCCGTTGCGTCGACCGCGCGGCAAGCCACCATGATGAAAAAATTACAGAAACCTAAAAAAGTACCCAAAAAAGGCGCCCCCAACGTCACGATACAAAATAGAGACGGACAATTCAAAATCAACGACGAATTTACTAACAACGTCGAAGTTTACGACGGACGAGTCGAATACgcgaaactaaaaaatatactatACACTCAAAATGATAGAAACCAAGTCGCGTTTAAAGAGGAGCAAAACCAAAACCAACGGGATCTAGCCATCCTCAGGCCTATAGGTCATCGAAATGAATCGCAGGAAAAACTACCTTACAGGCCTGAGAATACGGACGGGAAAATGCAAGTTTTCACTCATGTTGAAAAGGGGAAGGAATATAACGGTTCTATAGTTTCTAATACGCAGGTATTGGGAGATATGAGACATTTAGAGAGAGAGGTCGCGAGGGAAGTGAGAGGGGAAATACCGGGGGAGGGGATTGAGACTGCTTTTCTGGAGAGGTTGACCGCTATGTATAATATTCCTGCTGTatga
Protein Sequence: MRTVEAHLLEDKMDEAVTHYINTHHPSEPVHIDTNGIPMTVQDDGAGRVTIMHQQTYTTQMCRQVSVTEQVGDGPWGEELLEGPIAAIVAHLQNSRHHPPPHHKVAQVRTDVDTSVILDSTMRFNGQSLEQQGEPIVVQLPPMQTLPPLQDMKRCADSDWFTDKNKKQDDQSMLQDSDSQVLEMANSSPAQHKQQSRKSLPHKKRISRKLKRNNGNSTPQQDQLVVINCNEAVAGPQEQEQILPDNYVTVAHTHHMPHEVRPVLICQICGEYYGEEQLKFYHHLRQHYEPHTIIIENPVPDLPCDKMSSNCIVDNVATLPDSIVELSLENTVPKTLYQPIDKHILYTSSDKTLTYNTNKMQYSMASMEKEPPPVEADKADLYETLDKLELYNCGKCTRTFRKQKHFEAHMRDAHPPTKCEDMGEFSEPEDLMAGIQVCVGGEYDGAPPSAPPVPPAPLLPHLTVDNGHVHQDHTWYGRAGQGGGGPCGGYCSVCARDPDTHYKLLKEEVLQRIFDSEVSDNANFADNMISDHDVGDQDPNHDHDNDHGHNDHGHGHNDHGHGHNDHGHGHNEHRHGHEQEYKHNEHSNDHNEQIHSHNDHQNHQMHNDHTQMLNEHLQHSDHSQNSQEHNEHHHNEQSHHDDGHDHNDHSHDHNDHSQEHIDHSQEHDPNDEDYAPIREQKLRKSHTMGQEQVDHGQENVESEEHITLIRQSSKTKVQVKLFSCSKCDRVFSHRNSLLYHLLSHGGKQHTCRECGKDFYTHNALKIHRRVHNNIRPYKCETCGREFRQWSDLKYHNISLHSDKKHFKCEYCGKEFARKYSLNLHVRIHTGEKNYKCDYCSKTFRCSSYKLTHMRTHTGDRPYKCDECDKRFRSAFDLRRHSLIHDKIRNRFDEHKPKSKENNKKSKMTDIKEEIEEKIELEPSPKKIKQIAVASTARQATMMKKLQKPKKVPKKGAPNVTIQNRDGQFKINDEFTNNVEVYDGRVEYAKLKNILYTQNDRNQVAFKEEQNQNQRDLAILRPIGHRNESQEKLPYRPENTDGKMQVFTHVEKGKEYNGSIVSNTQVLGDMRHLEREVAREVRGEIPGEGIETAFLERLTAMYNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00826149;
90% Identity: iTF_00826149;
80% Identity: -