Basic Information

Insect: Hypomecis punctinalis
Gene Symbol: -
Assembly: GCA_949316475.1
Location: OX438799.1:3666075-3689806[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0027 0.29 13.0 0.3 3 23 118 139 116 139 0.93

2 10 0.0039 0.43 12.5 0.0 1 23 145 167 145 167 0.96

3 10 0.017 1.8 10.5 0.2 1 23 175 198 175 198 0.90

4 10 7.1e-07 7.8e-05 24.3 3.6 1 23 203 225 203 225 0.98

5 10 0.0001 0.011 17.5 3.7 1 23 231 253 231 253 0.97

6 10 0.00064 0.07 15.0 2.4 3 23 261 281 259 281 0.97

7 10 4e-07 4.3e-05 25.1 0.1 1 23 287 309 287 309 0.98

8 10 0.022 2.4 10.2 7.4 1 23 315 337 315 337 0.99

9 10 0.00014 0.016 17.0 0.3 1 23 1123 1145 1123 1145 0.99

10 10 4.3e-05 0.0047 18.7 5.8 1 23 1151 1174 1151 1174 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0027	0.29	13.0	0.3	3	23	118	139	116	139	0.93
2	10	0.0039	0.43	12.5	0.0	1	23	145	167	145	167	0.96
3	10	0.017	1.8	10.5	0.2	1	23	175	198	175	198	0.90
4	10	7.1e-07	7.8e-05	24.3	3.6	1	23	203	225	203	225	0.98
5	10	0.0001	0.011	17.5	3.7	1	23	231	253	231	253	0.97
6	10	0.00064	0.07	15.0	2.4	3	23	261	281	259	281	0.97
7	10	4e-07	4.3e-05	25.1	0.1	1	23	287	309	287	309	0.98
8	10	0.022	2.4	10.2	7.4	1	23	315	337	315	337	0.99
9	10	0.00014	0.016	17.0	0.3	1	23	1123	1145	1123	1145	0.99
10	10	4.3e-05	0.0047	18.7	5.8	1	23	1151	1174	1151	1174	0.96

Sequence Information

Coding Sequence: ATGTTCCAGCCTTCGATACCCAGCTGGAATTCACCAGGCTCCAGGAGGAACTTCGCTGATAAAATGGCAGATATTTTGTCCGCTGAAAAAGATCCACTAAACGGAATCACCACCCCCGCTATCGACGCGCCAGCGGCCGCGACCCCGGCCGGGTGCTTACCGGACTTGGGCGAGACTCCCAGCGACACCCCGGACGGGAACGTGGTCTACGTGACTGTGGATACCACTCAAACTGCTCCCGGGACTGGAGAGCCGGCTGAAGCTAATGAAGCAAACCAAACcgCTCCTCCAGAAAAGTCGGCGGAAGCGGAGGAAGAACTGCTCCTCAATGGCGGGCGGACCAAGCTCGCGTGTCCACAGTGCGACAAGATGTTCAGCTCTAAGCAGAGTCGCTCCATGCATGTCAGGGCAGTGCACAGAGGCGAGCGTCCGTACGCGTGTAAAGTATGCGGCGCGGTGTTTGCGTATCCGCGCGCGTTGGCGCTACACTCGCTCAAGCATCGCACGCGCGCCTCGAAGGGATACGCCTGTGACTTGTGCGGAAAGGTGCTGAACCACCCGTCATCAGTGACGTACCACAAGGAAGCCGAGCACTCGAAGCAGAAGTTTGTATGCAACAAGTGCGGCAAGAGCTTCAAACACAAGCAGTTGCTGCAGCGGCACCAACTCGTCCACACGCAGCATCGACCCTATCACTGCAAGCAATGCAACGCGTCGTTCAAAACCAAAGCCAACCTGTTCAACCACCAGCTGCTCCACTCGGGCATCAAGAAGTTCGGCTGCGACCTCTGCAAGCAACGGTTCGCGCACAAAACTAGCCTCACTCTGCACATGCGGTGGCACAAcgGTCAAAAACCATACGTTTGCAAGGTGTGCGGTAAGGCGTTCAGTCAGAAGGGCAATCTCTCCGAACACGCTCGCATCCACACGGGAGAAAAGCCGTTCCAATGTGCGCACTGCTCGCGGCGGTTCACCACGTCGTCGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCGGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCATACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTTTACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGACCGTCAGTATACTATACATAACATCAACACCAACCGTTTCTATACTTATACATAACATCATCATCAGTTATCACCACGTCGTGGCAACACCGGCTGCATCTCCGCAGGCACACCGCCGAGGAGCGGCCGATTGTCACAGCAACCCTACTGTACATGATTCCAGACGTATAAGCGCCCCAGTGACCCGCAACCGCCCCCCGCCGCCCGCACCAACGGGTCCGCCTCCCGAGCCCCCCACCCCGCACACGTTGGCGGCCGGGGTATATAAATGCGGGTGGTGCGGCCGAGCCTGCGCCACTCGCTGGGCGCTCGTCAAGCACGCGCGCCGGCACACTGGGGAGCGCCCGTTCAAGTGTCCACATTGTCCACGAGCATTTGCTGATTGCTCAAACCTTAACAAACATAAAAAGCACGTGCACAAACAAATCAGCCTGCTAGCCAACCAGCTCCACCGCCCACACGTCCCCACAGTCTCggtcgcgccgccgcccgcgcgctCGCCCGAAACTGAACGTACTGAACTACTCGTTGAAACTTCTGCCAATGGCGTCGAAGAACGCGTCATATACGTCACCTATGACGTCGACGATCCTCATTCACCGGACTATCAGCTAGTCGACGCGGAACAGACCTTGGCCAATGGCGTCGAGGAGAGCGTCATATGCGTAAATTATGACGTTGAAGATCCTCATTCACCGGACTATCTGCTTGTCGACGCAGAGCAGGTAAGACACTGTAAACAGATGATCAACAAGTGCACCGCCCTAAAGTCTCGGTTGCGCCGCCGCTCGTACGCTCGCCCTACACTGAGCGCACCGAACTACCATCCATCGTCAACTAGTGCACCGCCCCAACGTCCCTGCAGTCTCGatcgcgccgccgcgccgcccgaaAATGAACGTACTGAACTATTCGTTGAAATCGAAACCTCTGCCAACGGCGTCGAGAAGCGCGTCAGGTACGTCACCTACGACGTCAACGATCCTCATTCACCGGACTATCAACTCGTAGACGCAGAGCAGGCGGCTGAAATCCTTGAGCGATCAGACGTAACGACAACTGAACTGTACGCGGAGTCGCTACTGCGGGACAAAATCAACGAACCCAACTTACAAGAACACATGTCGGTGACGGACGAGCAAGGCAACCCGCTGCACTTCACCATGCAAGACGGCACGCAGCTCGCGATCACCTCGCTCGACGGACAGTCCTTACAGGTTATTACTGAAGACGGTCAGACTATTCCAGTTGAAATCAACGGGTTTTCACCAGAAATTCAGCTGGCGTCCCCTCCGGCCGCGTCCACTCACCACCTCACCATCGAGAAATCCGACGACGAGCCGAGCTCCCCCATCACGCACTACTATACCATCGTGTAA
Protein Sequence: MFQPSIPSWNSPGSRRNFADKMADILSAEKDPLNGITTPAIDAPAAATPAGCLPDLGETPSDTPDGNVVYVTVDTTQTAPGTGEPAEANEANQTAPPEKSAEAEEELLLNGGRTKLACPQCDKMFSSKQSRSMHVRAVHRGERPYACKVCGAVFAYPRALALHSLKHRTRASKGYACDLCGKVLNHPSSVTYHKEAEHSKQKFVCNKCGKSFKHKQLLQRHQLVHTQHRPYHCKQCNASFKTKANLFNHQLLHSGIKKFGCDLCKQRFAHKTSLTLHMRWHNGQKPYVCKVCGKAFSQKGNLSEHARIHTGEKPFQCAHCSRRFTTSSQHRLHLRRHTAEERPYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASRQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAYRRGATVSILYITSTPTVSILLHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGATVSILYITSTPTVSILIHNIIISYHHVVATPAASPQAHRRGAADCHSNPTVHDSRRISAPVTRNRPPPPAPTGPPPEPPTPHTLAAGVYKCGWCGRACATRWALVKHARRHTGERPFKCPHCPRAFADCSNLNKHKKHVHKQISLLANQLHRPHVPTVSVAPPPARSPETERTELLVETSANGVEERVIYVTYDVDDPHSPDYQLVDAEQTLANGVEESVICVNYDVEDPHSPDYLLVDAEQVRHCKQMINKCTALKSRLRRRSYARPTLSAPNYHPSSTSAPPQRPCSLDRAAAPPENERTELFVEIETSANGVEKRVRYVTYDVNDPHSPDYQLVDAEQAAEILERSDVTTTELYAESLLRDKINEPNLQEHMSVTDEQGNPLHFTMQDGTQLAITSLDGQSLQVITEDGQTIPVEINGFSPEIQLASPPAASTHHLTIEKSDDEPSSPITHYYTIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -