Hpun034451.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438816.1:3581520-3602617[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0027 0.29 13.0 3.3 1 23 344 367 344 367 0.96 2 30 0.068 7.4 8.6 8.2 2 23 375 396 374 396 0.96 3 30 4.6 5e+02 2.8 0.1 1 12 400 411 400 418 0.88 4 30 0.0002 0.022 16.5 3.1 2 23 428 450 428 450 0.97 5 30 0.0026 0.28 13.1 0.1 1 23 454 477 454 477 0.95 6 30 0.011 1.2 11.1 0.2 4 23 488 508 488 508 0.95 7 30 0.011 1.2 11.1 0.2 4 23 519 539 519 539 0.95 8 30 0.011 1.2 11.1 0.2 4 23 550 570 550 570 0.95 9 30 0.011 1.2 11.1 0.2 4 23 581 601 581 601 0.95 10 30 0.011 1.2 11.1 0.2 4 23 612 632 612 632 0.95 11 30 0.011 1.2 11.1 0.2 4 23 643 663 643 663 0.95 12 30 0.011 1.2 11.1 0.2 4 23 674 694 674 694 0.95 13 30 0.011 1.2 11.1 0.2 4 23 705 725 705 725 0.95 14 30 0.011 1.2 11.1 0.2 4 23 736 756 736 756 0.95 15 30 0.011 1.2 11.1 0.2 4 23 767 787 767 787 0.95 16 30 0.011 1.2 11.1 0.2 4 23 798 818 798 818 0.95 17 30 0.011 1.2 11.1 0.2 4 23 829 849 829 849 0.95 18 30 0.011 1.2 11.1 0.2 4 23 860 880 860 880 0.95 19 30 0.011 1.2 11.1 0.2 4 23 891 911 891 911 0.95 20 30 0.011 1.2 11.1 0.2 4 23 922 942 922 942 0.95 21 30 0.011 1.2 11.1 0.2 4 23 953 973 953 973 0.95 22 30 0.011 1.2 11.1 0.2 4 23 984 1004 984 1004 0.95 23 30 0.011 1.2 11.1 0.2 4 23 1015 1035 1015 1035 0.95 24 30 0.011 1.2 11.1 0.2 4 23 1046 1066 1046 1066 0.95 25 30 0.011 1.2 11.1 0.2 4 23 1077 1097 1077 1097 0.95 26 30 1 1.1e+02 4.9 1.2 2 20 1115 1133 1114 1135 0.91 27 30 0.14 15 7.6 4.8 2 23 1174 1196 1173 1196 0.90 28 30 3.7 4e+02 3.2 0.8 1 21 1208 1231 1208 1233 0.56 29 30 0.093 10 8.2 3.2 1 23 1235 1257 1235 1257 0.97 30 30 2.2e-05 0.0024 19.6 1.7 1 23 1263 1286 1263 1286 0.98
Sequence Information
- Coding Sequence
- aTGTGTGACCTACAAATTTGTCGAATATGTCTCATCACTGCTGTGAGAGGGTACAAATTGGAGCAGTACAGTCTCCTTACTTGCTACGAAGGTGTAATGCGGCGAAAAATACATACCAAAGACTCTCTACCACAGTGGGTGTGCTATGAGTGTGCAATGATGCTGCACAAATTCCATAAATTCAAGGAGAAATGTGTAAAAGGACAACAGTTATTGAAACAAATATCATTTGGAGGAACAgttACATTTGAAGGGATTGCACTAATAAACAGATCCAATAAGAATCTTACTTCTCCTATAAGTATTTCTTTAGCAAGCGAAAGTGATAACGTCAGAACTATAACCGTAAAACACAGATCTAAAACAAAACCCAAGCCTATTCAACTCGAAAAAGTCATTTTAAACTATACCAGTGACGATTCAATGAAACATGAAGATCTCAAACTAAGTGaagttaaaaatgtatttgataACAACATTACCATTATTGATCAGAAAGATGACGAAAAATTACCGCTAGAACAAGTTGAAATCAAAACCGAAACTGAACCAGTAAAAGCAGAAACAACACATGACAATGAAACGGCAATACCAGAGCCTTTCGatattatacaaaatacaaatatcaTACAAGACACAGAAACTGATACCAACAACACGAAAACCAACATCACCAtcacaaataatgaaattgaaaacaaTGCAGATATAAATGATGATATGGGAAATACAGATCACATAGACCAAGCAATGTCAAGCGAAGATGAAAACATTTTCTTAGATATAGTAAAAAAAGCCGTCAAAGGTGAGAGCAAGTTAGTATTCCTAGATAACATAGACGTTCAACCagtgaagaagaagaaaaagtacACTAAGAAGTCGGAAAACAAAGGCAAAGTACGTAAGTTTGAGAAGCCAAAGAGACAGTTATTGACACCTGAGCATTggagaaaattcaaccttacgGAGGAAGAAGCAATGCATGAGTTTAAGCAGAGAGAACATAATGATCAGTATGTGAATGCTAACTATAAGTGTCATAATTGCTTGAAAGGGTTCTCCAAAGTTGAAATGTTGATGCGGCATATCAAGTTTAGGCATGAGGAGtCGTGCGGTCCGATCGAGTGTCGTTTCTGCCACATGCGTTTCAAACAGAAGAACAAGTTGTGTAAACACTTGAAGCAGCACTACGCCGTTTACCAGTGCTTACGGTGCGACATGCGGTTCCGACTCGAGAGTTCTGCAATTTTCCACGAAGACTATCACAATGGCGTGACTAGGAAGTGCAAATATTGCGGCGAAGAATTCAAACACTCGTCGACATACTACACACATGTAAGAATGTCGCATCGTAGCGCCCACGTGTGTGTAGCGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTGTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGTAAGTCACATACTACACACGTGCGGAGTCTCCTTCGTGTCGGCGGCCGGGCTCCAGCAACACCGCCGGATCAAACACTATGATAACTCTGAAGAAGCGGCTCCCAACCAAGACGAAGAGCTAGACACGTACTGCTCGAAATGCGACATCCGCTTCGAGACACACCTCGCGTACAACGAGCATCTCACTCACTCCAACATGCACGGGGACCTCAACACGGACACTGAAATAGCGCGGATCAACTTGAAAGGCAACAAAAAAGTATCTCCAGAAAGTTACAAAGGACTCCGTAAGAAGAAACCTACGACGTGTCAGTATTGTGGGAAGCACTTCGCGACGCAAGGGCTGTGTATGAAGCACCATTTGGCGGAGCACCCGCGTCGGTCGTTCTACCCGCCAGATAAAAGACATATTTGCGAAGTCTGCGGTCAGTCGCTAGCTgcAGTGAGCATCGCGTCCCATATGAACCGGCACACGCGCGAGCACGTGTACCCGTGCGCCACGTGCGGCATGCAGTTCATATCCAAGAGCAGCCACCACCGGCACCAAGTGACGCACACGGGCGAGCGGCCGTACCCGTGTccgctgtgcgagaagagattcACCCAGAAGAATAGTATGCAGCTGCACTACCGGACCTTCCACCTCAAGCAACCCTACCCCAaaagaaaTAGAAGGAAGAAGACCGACGTAGAAATACCTATAATGGAGTGCGCCATGAACAGAGATCGGATGCAGATGATGGAGTGTAGCCGCAGCGACGTCGACAGTAATGACGCGCCGCCCGCGCGCTGGAGACCCACCTTCTGA
- Protein Sequence
- MCDLQICRICLITAVRGYKLEQYSLLTCYEGVMRRKIHTKDSLPQWVCYECAMMLHKFHKFKEKCVKGQQLLKQISFGGTVTFEGIALINRSNKNLTSPISISLASESDNVRTITVKHRSKTKPKPIQLEKVILNYTSDDSMKHEDLKLSEVKNVFDNNITIIDQKDDEKLPLEQVEIKTETEPVKAETTHDNETAIPEPFDIIQNTNIIQDTETDTNNTKTNITITNNEIENNADINDDMGNTDHIDQAMSSEDENIFLDIVKKAVKGESKLVFLDNIDVQPVKKKKKYTKKSENKGKVRKFEKPKRQLLTPEHWRKFNLTEEEAMHEFKQREHNDQYVNANYKCHNCLKGFSKVEMLMRHIKFRHEESCGPIECRFCHMRFKQKNKLCKHLKQHYAVYQCLRCDMRFRLESSAIFHEDYHNGVTRKCKYCGEEFKHSSTYYTHVRMSHRSAHVCVACGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEVSHILHTCGVSFVSAAGLQQHRRIKHYDNSEEAAPNQDEELDTYCSKCDIRFETHLAYNEHLTHSNMHGDLNTDTEIARINLKGNKKVSPESYKGLRKKKPTTCQYCGKHFATQGLCMKHHLAEHPRRSFYPPDKRHICEVCGQSLAAVSIASHMNRHTREHVYPCATCGMQFISKSSHHRHQVTHTGERPYPCPLCEKRFTQKNSMQLHYRTFHLKQPYPKRNRRKKTDVEIPIMECAMNRDRMQMMECSRSDVDSNDAPPARWRPTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -