Hpun042042.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438822.1:10507769-10520038[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.0018 0.19 13.6 0.7 1 23 152 174 152 174 0.96 2 33 0.054 5.9 8.9 2.6 1 23 178 200 178 200 0.98 3 33 0.0031 0.33 12.8 3.0 1 23 208 231 208 231 0.96 4 33 0.017 1.9 10.5 1.8 1 23 236 259 236 259 0.93 5 33 0.011 1.1 11.1 0.7 1 23 265 288 265 288 0.97 6 33 0.00046 0.05 15.4 0.4 1 23 294 316 294 316 0.98 7 33 1.1e-06 0.00012 23.7 0.9 1 23 322 344 322 344 0.99 8 33 6.3e-05 0.0069 18.1 5.1 1 23 350 372 350 373 0.95 9 33 3.4 3.7e+02 3.3 0.2 1 23 435 457 435 457 0.94 10 33 3.7 4.1e+02 3.1 0.3 2 23 481 503 480 503 0.89 11 33 0.00017 0.019 16.8 1.0 1 23 524 546 524 546 0.96 12 33 0.0038 0.42 12.5 2.6 1 23 550 572 550 572 0.97 13 33 0.02 2.2 10.3 2.7 1 23 579 602 579 602 0.96 14 33 0.67 73 5.5 0.3 1 20 607 626 607 630 0.77 15 33 0.085 9.2 8.3 2.1 1 23 636 659 636 659 0.96 16 33 0.00019 0.021 16.6 0.7 1 23 665 687 665 687 0.97 17 33 2.8e-06 0.0003 22.4 0.9 1 23 693 715 693 715 0.99 18 33 4.5e-05 0.0049 18.6 5.8 1 23 721 743 721 744 0.96 19 33 6.2 6.7e+02 2.4 0.1 2 23 847 869 846 869 0.87 20 33 2.2e-06 0.00024 22.7 1.2 1 23 907 929 907 929 0.99 21 33 2.1e-05 0.0023 19.6 3.5 1 23 935 957 935 958 0.96 22 33 3.6 3.9e+02 3.2 0.0 2 23 1060 1082 1059 1082 0.90 23 33 4.8e-06 0.00053 21.7 0.5 1 23 1103 1125 1103 1125 0.99 24 33 7.4 8.1e+02 2.2 0.1 1 9 1129 1137 1129 1141 0.83 25 33 0.27 30 6.7 0.1 2 23 1223 1245 1222 1245 0.93 26 33 0.0023 0.25 13.2 1.9 1 23 1266 1288 1266 1288 0.99 27 33 0.0085 0.93 11.4 0.2 1 23 1292 1315 1292 1315 0.94 28 33 0.0023 0.25 13.2 0.6 1 23 1322 1345 1322 1345 0.95 29 33 0.11 12 8.0 2.4 2 23 1351 1373 1351 1373 0.96 30 33 0.0004 0.043 15.6 2.8 1 21 1379 1399 1379 1402 0.95 31 33 3.4e-05 0.0037 19.0 0.1 2 23 1409 1430 1408 1430 0.97 32 33 1e-06 0.00011 23.8 1.5 1 23 1436 1458 1436 1458 0.99 33 33 3e-05 0.0033 19.1 3.7 1 23 1464 1486 1464 1487 0.96
Sequence Information
- Coding Sequence
- ATGCTTGAAATCGATACTTCGTCGTCGTCGGTTGAAAACTTGAAACACAAGGTCGTCTTGTCAGGAGCCAACATCCTACAATCTACTGAAATGAGGTCCCGCAATGCCTTTGGAGATGCGCGGGACAATGCCGTCATAATGTTGGAATCTTCTAACATGTGCCCGTTCGAATTTTCTAATGACCTTTTCTCGTGTGTGTACTGCCCTTACATTTCGCCGGATTTTGGCCCCATTCGAAGCCATACCTTAAAACATAAACGCAATGATATGGCTCTACGAAACATGGATCCATCCTCAGTTTGCAAAGCAGATGTGACCGATCTAAAATGTGATATCTGCCAGGATTACATGATAGACATATCGATGCTGTTTCAACATCTTATTGATGTTCACAAAATACCTCTTGACAGAGAGGTCCAAAACATCATTATACCTTACTTGCTGAATGACAGATTTGCGTGTGCGAACTGCGATTCAGCTTTTGATCGTTTCCACAATTTAAACATCCACATGAATGAACACGACCCATACTACATATGTTTCCAATGCGACTTATGCTTCGACTCTGTAGAGCGTTTCCAAAAACATGCCCAAACGCATAACGATAAAACGCCCAAACAACACAAGTGCTCGAAATGTGATAAATCGTTTCCCAAGATTTATCAAAAGAATAGCCACATGATATCCGAGCATAAAATATATCCCCACAAATGTCCTCACTGCACTGAGACTTTTGCAAGATACGACCTAAGAGTCTTACACCTGAACGAGGTTCATAATAAAAAGATTGAATATCGTTGCACAATGTGCCCCAAAATCTGGAAAAGTTCTTCGGCAAGGGCGAAACATATGCGATATAGTCacgttaaaaataaaagattccctTGCTCTGTCTGTGATGACATGTTTATCACTGCACACGATTTGAACACCCATATGATAAAACATAGCGGAGAGAAGAAGTATCAGTGTGAAGTATGTAAAAAATCGTATGCGAGGAGAAATTCTCTAACAGAACACATGAGGATTCACAACAATGATAGGAGGTTCGCGTGTAAGCGTTGTGATAAGACGTTTGTGCAGAGATGCAATCTGGTGGTGCACATGAAATCGCATCATCCTGACGATGTCAGTTTTAAAGGCAAAGCTTCAAGTGAGATTGCCGAAAGTAGGTCGGAAGGAACCATCACAATAAGGTGGACAGCAAAGAACGCTCACGTTAGCTTTGGAGACGCGCGGGACAATGCAGCTATGATTTTAGAATTGTCTAACGCGTGTCCattcaaatatatcaaaaattcATTCACTTGTGCATACTGTCCTTTCACATCGCCAGACTTCGGCCCCATCAGAAACCATACAAAAGAACATGAAATAAGAGCCACTGCACTGCAGAACATGAGCCGGTCTTCAGTGTGTAAAGCAGACGTAACAGATCTTCGATGTGAAATTTGTCATGAGAGCATGAAAAGCGTATTGACTCTATTTGAACACCTTATTGAAGTCCACAATAAACCTCTTAGTAGAAATTTCAAACCTGGTATAGTGCCTTACCTGCTGAACGACAGGTTCGCGTGTGCTGACTGCGATCAGACATTCAATCGATTCCACAATTTAAACATCCATGTAAACGAACATTATCCCAATTTTATTTGTTCTCATTGCGGCCACGGATTCGCATTCGCAAAACGACTGCGAACCCATCTTATGATACATACTAAAACGTCCGAAAAACACAAATGTTCGAAATGCGATGAAAGGTTTCCCACTATATATAAGAAACGTAGCCATATGATATCCGAACATAACATTTTACCTCATAGATGTCCTTATTGTGCTGAAACTTTTGCTAGATATGACATTAGATTGGCGCATTTGAAAGACATTCACGATAAAACGATTGAGTATCACTGTTCTATGTGTCCAAAAATCTCTACAAGTATATCGTCAAGGGCTAAACATATGCAATATCGACACGGTAAAGAAAAAGAATTCGCTTGCTCGGTTTGTGGTAACTTATTTGTGACTGCTCATGATTTGAAcaagcacatgctgaaacataGTGGTGAGAAAAAGTATCAGTGTCAAGTGTGTAAAAAGGCATATGCGAGAAAGAATACCTTGACCGAGCACATGCGGATTCATAATAATGATAGGAGATTTGTGTGTGTGCATTGTGGTAAGGCATTTGTGCAGAAATGCAGTTTGAAGGGCCATATGAAAACGCATCATCCTGAAGATGCCGAGTTTAACGATAAGGCCGATGCCAAATTGGTATTAAAAGAAATCTATAACGGAACCATCAGCAACAACATGAGTTCGACTGCAAAGAGAACTCACATTGGCTATGGAGACGCGCGGGACAACGCTGTCATTATTCTAGAATGTTCTAACGTGTGCCCGTTCAAATATTCTGATAATAATACCTTCGGTTATTTCGACCCCATCAGGATTCATAATAAAGAGCATAAATACAGATCTCTCGCTCTTCGCAATATGAGATCTGCCACAGAGTGTAAGGTAGATGTGACTGAGCTGAAATGTGAGATCTGCCAAGAAGCTATGGCAAATATTAAGACGCTATTTGATCACTTAGTCCAGGCTCACAACAAGCCATTAAACAGGAAGTTCGAGTCTGGCGTCCTTCCTTACCTTCTCAATGATGGTTTCATGTGTGCCGATTGTGGTCTCAGTGTAAAACACGGCGGGGAAAAGAAGTATCAGTGTCAAGTGTGCAAAAAAGCATatgcgaggaagaaaaccttgACGGAACACATGCGTATACACAACGACGACAGGAGATTTGTTTGTGCACAATGTGGCAAGGCGTTTGTGCAGAAATGTAGTCTAAAGGGACATATGAAGACGCACCATCCTGAAGCTTTGCTCGCTGACCAGGCAGCTGCCGACGCCGCAAgAACCCCCACCGTAAAACGGACCACACGAAATTTGAACAAAGACTTTGAGGACGCGCGGCACAACGCAGCCATTATTTTGGAGTTTTCTAACATGTGTCCATTTAGGCatcaaaacgtatttttttgttgCGCGTACTGTTCGTTCACGTCGCCAGATTTCGGCCCTATCAAGAGCCATACTaaagaacataaaaataaagcttTGGCCGTGTGCAACGTGGACGGCTCATCGGTCTGTAAGGTTGATATAACAGATCTGAGGTGCGAAGTCTGTCAGGAAAGCATTAAAGATATATCGACGATATTTGACCACCTTATCGAAGCCCACAACAAACCTTTGAATAGAGGTTTAAGATCTGGAGTGGTGCCATACTTGTTGAGCGACGGGTTCAAGTGCGCCGATTGTGGTGTAACGTTTGATTCGTTCCGCAACTTGAATATCCACATGAACACGCACTACCCTCATTTTATCTGCCCAGATTGTGGCCAAGGGACGCCCACCGTAAAACGGACCATCCAAAATTTGCACAAAGACTTTCGGGACGCGCGGCACAACGCAGCTATTATTTTGGAGTTTTCTAACGTCTGTCCATTTAGACATCAAAACGTATTTTGTTGCGCATACTGCTCTTACACGTCGCCAGATTTCGGCCCTATTAAGTGCCACACTAAAGAACACAAGGTCAGAAGTTTGGCCGTGTGCAACGTGGATTCCTCATCGGCCTGTAAAGTTGACGTAACAGACCTGAAGTGTGAAGTCTGTCGAGAAAACATAACAGATTTATCGACGCTATTTGACCATCTTATAGAAGCCCACAACAAACCTTTAAATAGGAATTTGAAATCTGGAGTTGTGCCTTACTTGTTAAAGGACGGGTTTAAGTGCGCGGACTGCGGAATTACATTTGATGTGTTCCGAAATTTGAACTGTCACATGAACACGCACTACCCACATTTCATCTGCTCCGATTGCGGTCAAGGTTTCATGAATGAGTCGCGAATGAAGGCCCACGTAAAATTTGTGCATAATAAACCACTACAGTCGTTTAAATGTCCAAAATGCAATGAAACTTTTCCTACTGATCAAAGCAAACGCAATCACATGGTTTCAGCCCATAATATATTTAACCGTAAATGTCCTTATTGCTCCGAATCATTCAAAGCGCATCGTGATAGAATCACGCATTTAAATAAGTAtcacaataaaaatatcacttttCCTTGTTCCATATGTTCTAAGGTTTTTAAATCATCTTCAAACCGATCCAAGCATATACGGTGTGTCCATATTAAGGACAAACAAATTGTATGCCCAGTTTGTGGTGATATGTTCACTACCAGTAGCGATTTGAAATATCATATGATAAAGCATAGCGGGGAGAAGGATTATCAATGTGAAGTGTGCAAAAAAACTTATGCCAGAAAGAAGACCCTGACGGAACACATGCGTATACACAATGATGATAAGAGATTTGTTTGTGTAAACTGTGGGAAAGCGTTTGTACAGAAATGTAGTTTAAAAGGACATATGAAAACGCATCATCCAGATTCGGAGTTAAGTGAACTTATGCCTAGAGGTTTTGTCAGTTTGGAAACTAATAATACTAGAAAGAAATCATAA
- Protein Sequence
- MLEIDTSSSSVENLKHKVVLSGANILQSTEMRSRNAFGDARDNAVIMLESSNMCPFEFSNDLFSCVYCPYISPDFGPIRSHTLKHKRNDMALRNMDPSSVCKADVTDLKCDICQDYMIDISMLFQHLIDVHKIPLDREVQNIIIPYLLNDRFACANCDSAFDRFHNLNIHMNEHDPYYICFQCDLCFDSVERFQKHAQTHNDKTPKQHKCSKCDKSFPKIYQKNSHMISEHKIYPHKCPHCTETFARYDLRVLHLNEVHNKKIEYRCTMCPKIWKSSSARAKHMRYSHVKNKRFPCSVCDDMFITAHDLNTHMIKHSGEKKYQCEVCKKSYARRNSLTEHMRIHNNDRRFACKRCDKTFVQRCNLVVHMKSHHPDDVSFKGKASSEIAESRSEGTITIRWTAKNAHVSFGDARDNAAMILELSNACPFKYIKNSFTCAYCPFTSPDFGPIRNHTKEHEIRATALQNMSRSSVCKADVTDLRCEICHESMKSVLTLFEHLIEVHNKPLSRNFKPGIVPYLLNDRFACADCDQTFNRFHNLNIHVNEHYPNFICSHCGHGFAFAKRLRTHLMIHTKTSEKHKCSKCDERFPTIYKKRSHMISEHNILPHRCPYCAETFARYDIRLAHLKDIHDKTIEYHCSMCPKISTSISSRAKHMQYRHGKEKEFACSVCGNLFVTAHDLNKHMLKHSGEKKYQCQVCKKAYARKNTLTEHMRIHNNDRRFVCVHCGKAFVQKCSLKGHMKTHHPEDAEFNDKADAKLVLKEIYNGTISNNMSSTAKRTHIGYGDARDNAVIILECSNVCPFKYSDNNTFGYFDPIRIHNKEHKYRSLALRNMRSATECKVDVTELKCEICQEAMANIKTLFDHLVQAHNKPLNRKFESGVLPYLLNDGFMCADCGLSVKHGGEKKYQCQVCKKAYARKKTLTEHMRIHNDDRRFVCAQCGKAFVQKCSLKGHMKTHHPEALLADQAAADAARTPTVKRTTRNLNKDFEDARHNAAIILEFSNMCPFRHQNVFFCCAYCSFTSPDFGPIKSHTKEHKNKALAVCNVDGSSVCKVDITDLRCEVCQESIKDISTIFDHLIEAHNKPLNRGLRSGVVPYLLSDGFKCADCGVTFDSFRNLNIHMNTHYPHFICPDCGQGTPTVKRTIQNLHKDFRDARHNAAIILEFSNVCPFRHQNVFCCAYCSYTSPDFGPIKCHTKEHKVRSLAVCNVDSSSACKVDVTDLKCEVCRENITDLSTLFDHLIEAHNKPLNRNLKSGVVPYLLKDGFKCADCGITFDVFRNLNCHMNTHYPHFICSDCGQGFMNESRMKAHVKFVHNKPLQSFKCPKCNETFPTDQSKRNHMVSAHNIFNRKCPYCSESFKAHRDRITHLNKYHNKNITFPCSICSKVFKSSSNRSKHIRCVHIKDKQIVCPVCGDMFTTSSDLKYHMIKHSGEKDYQCEVCKKTYARKKTLTEHMRIHNDDKRFVCVNCGKAFVQKCSLKGHMKTHHPDSELSELMPRGFVSLETNNTRKKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -