Hpun023710.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438808.1:11396048-11399645[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-05 0.015 16.4 0.2 17 40 31 54 20 58 0.80 2 2 0.1 26 6.0 0.0 2 22 129 149 128 149 0.92
Sequence Information
- Coding Sequence
- ATGCCTACTGATTACATTAGAAAGACTGATAGAGGTTTGGCAAGTCTTGAAATATACAAGCTCGCCGCAGAAGAAGTTACATTGCGTCAGAAAAGTCTCCGTGATGCTGCTTCGAGTTACAACCTCAGCCATACTTCTCTCTACAggtatattaaaaagaaaaaagcttATGATGCCAATGAAACGCCAACTCCTCCATCGGTCATAAAGGGCATCTTCAGTTCCCTGTTGAGGCATGAAGCCGTACTGTATCTGACTGATGGTTGGGAGGAGATGCCATTGGAATCGGGCCACCAAAAGCTTTTCGACGATTTTACCGGCGACAGGCAAGAGACCTATAGGACGgTGATCAATATGGCAAAGAAAATTTATAACTCTTGGAAGCAAGATGATATGGATGAGGCTCTGCAGCAACATTGTGATGGTAAATTGGGATTCAATGAAGCATGA
- Protein Sequence
- MPTDYIRKTDRGLASLEIYKLAAEEVTLRQKSLRDAASSYNLSHTSLYRYIKKKKAYDANETPTPPSVIKGIFSSLLRHEAVLYLTDGWEEMPLESGHQKLFDDFTGDRQETYRTVINMAKKIYNSWKQDDMDEALQQHCDGKLGFNEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -