Hpun035262.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438816.1:14820371-14822477[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 5.6e-05 24.1 0.0 3 35 20 53 18 60 0.84 2 2 7.1 1.8e+03 0.1 0.2 7 24 104 125 103 126 0.72
Sequence Information
- Coding Sequence
- ATGCCGCGAGATTACAAAAGGCAAACTGGAAGCAGAgcttacaaaaattataaagatgAAACTCTACAAAGTGTTTTAGAAGAGATTAAATCGGGGCGTATGTCAGTTCGTGGTGCAGCCGAAAAGTATGGTATCCACCGAAATACGTTGTCTTCTAAATCCCTTTATAAGGCAGAGAAAACTAGAGGAATAACTCCCATTACTACTGTTGATCATAAATTCATGCTTGGATGCGAGATACGCGAGCTGGCGTGGACGCGCATTATGCGGCGCGCGCAGCGGGTGGAATCCGGTGACAGCAGAAAGACGCGAGCGCTGGAGTGGTGCGCAGCAGGTAGCGGGACGCGCGCTATGGCGCTACGGCGCGCGCAGCGGGTGGAATCCGGTGACGGCAGAAAGACGCGCGCGCTGGAGTGA
- Protein Sequence
- MPRDYKRQTGSRAYKNYKDETLQSVLEEIKSGRMSVRGAAEKYGIHRNTLSSKSLYKAEKTRGITPITTVDHKFMLGCEIRELAWTRIMRRAQRVESGDSRKTRALEWCAAGSGTRAMALRRAQRVESGDGRKTRALE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -