Hpun029380.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438812.1:6696526-6697134[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-06 0.0011 20.0 0.0 18 38 42 63 28 69 0.82 2 2 0.11 29 5.8 0.0 25 40 184 199 181 200 0.91
Sequence Information
- Coding Sequence
- ATGCCACGAAATCGTATAAGAACCTATAGAAGTAACAGAAACGGCAAATCATTCAAACCGTACACCCATTACTCCGAAAAAAAACTGCAAACAGCAATTCAAACATTTAAAGATAACATTTTTAGTATTGGAGATGCAGCTACAACCTATGATGTTCCAAAAACTACACTATGGAGGAagttaaagaaaataaactGCACACAAGAAAAGGCTGGACGTCCAACTTTGTTTTCAACAACGGAAAAACGGTGTTTTATTGAACATATAAAGACTTTATCTGAATGGGGATTCCCATTTGACATGGCAGATCTACGCATCCTCGCCCAAAAATATTTGGAGAAAATTGGCAAAGTAGTGTATGGTCTTAAAGACAATACGCCAGAGACTGATTGGGCCCGAAATTTTCTTAACAGATATAAAGGTGAACTCTCAAATAGATTGGCCACAAATATATGCACATTTAACGAGACTGATGGCAAAGGAATTGACAGATCAGAAGAGAGGACCGAACTTGAAAAAACATCTGCTATAAATAATTACGCTGAGGAAAATTATGACATTAACCAGGATGTGTTGGTTAGATATTACCGAAGGAAAAAGTGGACTTAG
- Protein Sequence
- MPRNRIRTYRSNRNGKSFKPYTHYSEKKLQTAIQTFKDNIFSIGDAATTYDVPKTTLWRKLKKINCTQEKAGRPTLFSTTEKRCFIEHIKTLSEWGFPFDMADLRILAQKYLEKIGKVVYGLKDNTPETDWARNFLNRYKGELSNRLATNICTFNETDGKGIDRSEERTELEKTSAINNYAEENYDINQDVLVRYYRRKKWT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -