Hpun010414.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438799.1:16034689-16036968[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 3.2e-06 28.1 0.0 3 40 15 53 13 57 0.86
Sequence Information
- Coding Sequence
- ATGAgttctaaagaaaaaaaaaagcgtAAGCAATGGGACACTGACCAAATGGTGTGTGCTTATAACgctgtaaaaaataaagaaatgggTTACCTCAAAGCATCCCAAGTTTTTAATGTACCAAAATCAACATTGGAGCGTTATTGCAAAAGTGAAACGCATACAGTAGCAGAGCTAAATTCTATGAAGTTGGGCCGAAAACCTACTTTTTCACCTGAAATGGAACAAGAACTTGTAGAATATTGTTTAACAATGGTGTCAAGATTTTATGGATTGCGAGCCTCTGACATTCGTGCTTTGGCGTTCCAATTGGCTATAAAGAATGGGCTGCCTCATCAGTTCAATACGGAGAGGAATATTGCAGGCCGAAAGTGGATGAGGAAATTTCTAAAAAGAAATCCTCAGTTGTGTTTTAGAACACCTCAAGCTACATCTGCTAATAGAGCGACAGGATTTTCAAAAGAGAAAGTGGACCAGtttaatgatattttagaaGCAGAATtgccaaaaattaattttgacccaACTAAAATCTACAACGTTGACGAGACGGGTGTGACTGTTGTACAACATAAAATGGAGAAAGTTTTATCTCTTAAAGGACAGAAGCAAGTGGGTGGAATTTCATCGGCGGAGCGGGGTGCCTTGATCACTCTAGTCACGTGTATGAGTGCAtccggtttttttgttccacCCCTGTTCATTTTCCCCAGGGTGAACATGAAAGAAGAACTTAAAAATGGCGCTCCACCTGGATCTCAATTTGCATGTCACAAATCGGGCTGGATACAAACCCACATCTTTACGCAATGGATTGTTCATTTCATTAACACAGTTCATTCATCTAAAGAGAATCCAGTCATATTGATCTTAGATGGTCATTTCACCCACACGAGAAATATTGACGTTATCGACAAATGTCGGGATAATGGTGTAATCCTGATATGCCTACCACCACATTCATCTCACCGAATGCAGCCTTTGGATGTATCGTTCATGAGTCCATTCAAAACATACTATGCCAAAGAAATTGATTCATGGCTGAAAAATCATCCAGGTCGCGTGGTGACAGCATTTCAAGTAGCAGAATTAGTGGGGAAGGCGTACATGAGGGCTGCTACATTAGAGGTCGCCGTTAATGGATTCCGCAAAAGCGGAATATTCCCATTCGATCGCAATCATTTCAGAGATCACGACTTTGCCGTGCAAAACGAGGACGATATTGAGAAAAATAAGTATAGTACTGAACTATATCTTCCATTACCAGCTGCTTCCGATGCACAGAACGAAGAAGATGATGACCTGCGTGTGGACAAGGATTCATCTCGAGCTCCAGTGAAATCTCCGATCATTTCAGCTACTGAATCAGCTATGTTCCTGGCGACTAAAAGTGTCGAACCAGTGCACTTCCCATTACCACCTGATGTTACTGGTACACAAACCATAGCACTGTCAAATGCTAGCGCTGAAATACCTCTGTCGCTAGCCCCACCAACAAATTCGACGCCATTGAGCCTAGTATCACTTGCACTGACTGCATTACAATTTATACGCTCACGGGATTCAGATGTTGAACCAACTCTACTTCCAGTCATACACCATACTGAAGGCATGCATCCGACGACAtcaaatgataaatcaagtCACCATTCAGTGTCATTGACGAGGACACAAGTCACAAAATTGTCGAATTCAAAATTTTGCGTCAAACCTGCTGAAATCAGTCCATTACCTAAAATTCAAtcaagaggaaagaaacctgatCAAATAACACAGCTCCGAGGTGGCAAACCTTTATTGGTGACCAGTTCACCATACAAAAATGAATTACAAGAACAGCTGACTAAAAAAGCAATGCCAGGGACTAGTACGAAAAAAACAATGTCTGATAAAAAGAAGAACGCTAAAAAGactacacaaaaaacaaaaatcattaagAAAAAGAAGACACCTgtcaaaaaaaacgaaaaaaagaaaacacatagtagttcGTCAAGTGAAGGTGACGAAGAACAGCCGCCATTGATGAGCTCTGACGAAAGCGACACAGCTGAAGATGAAGACTGCATTTATTGTCTTAATAAATATTCGAATGACATTGCTGGAGAAAAATGGATCCAGTGCACTAATTGTTTTCGGTGGTGTCATGAGTTGTGTGCTGGTGTAGAACCGCATACCAAAAAGTTCTTCTGTGATTTTTGCAAAGATTAG
- Protein Sequence
- MSSKEKKKRKQWDTDQMVCAYNAVKNKEMGYLKASQVFNVPKSTLERYCKSETHTVAELNSMKLGRKPTFSPEMEQELVEYCLTMVSRFYGLRASDIRALAFQLAIKNGLPHQFNTERNIAGRKWMRKFLKRNPQLCFRTPQATSANRATGFSKEKVDQFNDILEAELPKINFDPTKIYNVDETGVTVVQHKMEKVLSLKGQKQVGGISSAERGALITLVTCMSASGFFVPPLFIFPRVNMKEELKNGAPPGSQFACHKSGWIQTHIFTQWIVHFINTVHSSKENPVILILDGHFTHTRNIDVIDKCRDNGVILICLPPHSSHRMQPLDVSFMSPFKTYYAKEIDSWLKNHPGRVVTAFQVAELVGKAYMRAATLEVAVNGFRKSGIFPFDRNHFRDHDFAVQNEDDIEKNKYSTELYLPLPAASDAQNEEDDDLRVDKDSSRAPVKSPIISATESAMFLATKSVEPVHFPLPPDVTGTQTIALSNASAEIPLSLAPPTNSTPLSLVSLALTALQFIRSRDSDVEPTLLPVIHHTEGMHPTTSNDKSSHHSVSLTRTQVTKLSNSKFCVKPAEISPLPKIQSRGKKPDQITQLRGGKPLLVTSSPYKNELQEQLTKKAMPGTSTKKTMSDKKKNAKKTTQKTKIIKKKKTPVKKNEKKKTHSSSSSEGDEEQPPLMSSDESDTAEDEDCIYCLNKYSNDIAGEKWIQCTNCFRWCHELCAGVEPHTKKFFCDFCKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825661; iTF_00825591; iTF_00825593;
- 90% Identity
- iTF_00825661; iTF_00825591; iTF_00825593;
- 80% Identity
- -