Hpun004101.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438795.1:27042279-27044645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 3.2e-05 24.9 0.0 3 35 16 48 14 55 0.89 2 2 3 7.5e+02 1.3 0.1 20 29 353 362 352 363 0.89
Sequence Information
- Coding Sequence
- ATGGCATCCTCAGAAAAAAAAGCGGTTCGGCAGCAATGGGACAAAGACTGCATGTCTATGGCTATTCTGGctataagagaaaaaaaaatgggataCTTAAAAGCATCTAAAACGTTTGGTGTTCCTAAAACTACACTTATACGTTTATCACAGCAAAATAAGACGCCACTGGGAGAAGTAACTAACATGAAACTAGGAAGGAAAGCTACACTGCCACCTGAATTAGAGAAAGATTTGGCAGACTATGCCCTTAAAATGGAGGCAGCGGCATTTGGTCTAACTCGAAGTGATCTTAAAACTTTAGCTTATCAATtagcagaaaaaaataagttacatCACAATTTTTCGAAAGATAAGCAGTCCGCTGGTAAAACTTGGTTACGTTTGTTTTTGAGACGCCACCCAGAACTTTCGTTTCGTCGACCTACAGGGACATCTGTTGCAAGACTGAAAGGTTTTAACAAAGAAAACGTTGATGAATTTTTCAAGCTGCTGGGAGAGGCTATGAATAAATACAAGTACACCCCGAACAATATTTACAATGTCGACGAAACCGGTATCACGCTTGTACCTGGGAAAATGCCAGAGGTTTTGGCACGAAAAGGCAAAAGGCAAATAGCAGCTGTAACTTCGGCTGAAAGAGGTTCTACAGTCACTTGCGTAATGTGTATGAATGCTGGTGGAACATTTGTGCCGCCGATGATGATATTTCCCCGTAAACGGGACAGCCAACTTCTGATGAGAGGTGCTCCACCTGGCGCAATCCACGTCTGCCATCCATCAGGCTGGATTCAGACTGATCTCTTCACAAAATGGTTTAAACACTTCCTGAAATTCGTGAAACCTACTGCTGAATCTCCAGTCTTGTTAACCTTAGATGGTCATGCAAGTCATACGCGGAATATAGAACTAATTGATTTAGCTCGAGCGAATCATGTACAACTTTTGTCATTGCCTCCGCATTCAAGTCAGAAAATTCAACCACTCGACCGTACATTCATGGGtccttttaaaaaatattttactgaagcAACCCGCCAATGGGTAAATAACAACGCCAAAGCGGCATCAATATTTGATATTGCTGATTTATTTGGCCATGCTTACGTAAGAGCACAGCGAGCTGATTTGGCCATCAATGGTTTTCGAGTAACTGGGATATGCCCTATGGACAGAAGTGTATTTCAAGACCATGATTTTATTGTTAATGAGCCAGTCGATATAAATCCTAACCAGACAGTTCAATTGGCTACAGAAAACTTAGACTATCTGAGTgacaatgacattgacatgaTTAATCCCCCAACCCAGTCAGCTACTGACTGTGCTGAAGTTCATGATTTAAATCTTAACTCTACAGCTCAATTGGCTACAACAAACTCAGACGACCAGGGCGACATgattaatccaccaacccaatCAGCTTTTAGCGGTGCTGAAGATCATGATTCAGACCGAACTTTTTGTGAAGAATTTGAAGTTAGTGATGGTCAATGTAATGTCACAGAGAACACCAAATTGAGTAATTCTACTGTTGGGGGATCAAACAAAATGTTTCAACTCAATACCACCATCGCAGTTCCAACTTTGGTCAGTTTAGCGCTAGCGGCAGCTTTACAATTACAAACGGCGTCTCAGGAAGAAAAAAGCGATAAAGCAAACAGCCAGGCTGTCGCTGAAGTTAATGCTTGTGAAATAGCTGTAGATGCTCAAAAGGCTAAGCCCTTAGGAGTGAATTCTGAAGCTGTTACTTTAACTGCAAGTTCTTCTAAATATAATGATGGAGTTGAAAAAGTGTTAGCAGGTCCTTCTACATCAGCCGGTTATATTTCTCCAATACAATTGCGTCCCATACCACgcctacaaaaaaaaacgagtAACAAAGGAAGAAAGGCAACCAAGCCAATGATTTTGACTTCATCGCCTTATAAAACTGATTTAGAGACATCAATTAAAAGAAAGGAAGAAATAGAGTCTTTAAACAAAAGAAAGAGTTTTAACAAAGAATTAGACaagcaaaacataaaagaaagaAAGCAGAAACCTGGAAGTAAGAGAAAActgaaaagtaaagaaaaacagaagaaaacagaacgaaagaaaagaaaaacgaCAACTAAAGTACATCGATCAGCTTGCAACTCTGAAGATGAGGACGATGAGTTTTCAGTTAACGATGAAACTGATGAGAGTCCAGATCGTAGCCAAAGTGAAAATgctaaatgtttttattgtgaGGGGTTATTTTCAGAAGACACACGTGGAGAACAATGGATCCAATGCCTTTCTTGCAAGAGATGGGGCCACGAAGAATGTGCTGGGGTTGACGATGTCGCATTTGTCTGTGAATTTTGTCTATCTGATTAA
- Protein Sequence
- MASSEKKAVRQQWDKDCMSMAILAIREKKMGYLKASKTFGVPKTTLIRLSQQNKTPLGEVTNMKLGRKATLPPELEKDLADYALKMEAAAFGLTRSDLKTLAYQLAEKNKLHHNFSKDKQSAGKTWLRLFLRRHPELSFRRPTGTSVARLKGFNKENVDEFFKLLGEAMNKYKYTPNNIYNVDETGITLVPGKMPEVLARKGKRQIAAVTSAERGSTVTCVMCMNAGGTFVPPMMIFPRKRDSQLLMRGAPPGAIHVCHPSGWIQTDLFTKWFKHFLKFVKPTAESPVLLTLDGHASHTRNIELIDLARANHVQLLSLPPHSSQKIQPLDRTFMGPFKKYFTEATRQWVNNNAKAASIFDIADLFGHAYVRAQRADLAINGFRVTGICPMDRSVFQDHDFIVNEPVDINPNQTVQLATENLDYLSDNDIDMINPPTQSATDCAEVHDLNLNSTAQLATTNSDDQGDMINPPTQSAFSGAEDHDSDRTFCEEFEVSDGQCNVTENTKLSNSTVGGSNKMFQLNTTIAVPTLVSLALAAALQLQTASQEEKSDKANSQAVAEVNACEIAVDAQKAKPLGVNSEAVTLTASSSKYNDGVEKVLAGPSTSAGYISPIQLRPIPRLQKKTSNKGRKATKPMILTSSPYKTDLETSIKRKEEIESLNKRKSFNKELDKQNIKERKQKPGSKRKLKSKEKQKKTERKKRKTTTKVHRSACNSEDEDDEFSVNDETDESPDRSQSENAKCFYCEGLFSEDTRGEQWIQCLSCKRWGHEECAGVDDVAFVCEFCLSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -