Hpun038647.2
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438819.1:17766713-17769079[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 2.7e-06 28.3 0.0 3 38 23 57 21 63 0.92
Sequence Information
- Coding Sequence
- AtgaaaccaaaaaataaaactaaaaaaaaacctaaagatATTTGCCGCcgtaaattatataataaggAAAATTTAAACAAAGCCTTACAAGCTGTCAAAGATGGCATGAGTAAGAAACTGGCGGCAAAAACCTATAACGTGCCGCGGGCTACATTGCAGTACAGGATAAAGAACCCTGACCACCAATCACGGCCAGGTCCTCCTACCATTCTAACGGAAAAGGAAGAAAAAGATCTCGAAGATTGGATTATACTTAGTTGTAAAAAAGGTTTCCCAAAACGTAAAGATGATTTAATGAGCAGTGTATCCAACTTTCTCAAAAATAGTAACAGAGCCAGTGTTTTTAAGAACGGAGAAAAGtggtataaattatttcttcaACGTCACCCAAATATATCTGTACGAACACCTGAGGCAGTCACAGCAGCCAGTGCTGCTGTGTCACAAAATGATGTGAAAGGCTGGTTCAGTCAAATTGAAGAATATCTTAAAGAAAAcgatttttttgaaatactCGCAGATCCTTCCCGAGTATTTAATGGCGATGAGACCAACTTCCTTCTTTGCCCCAAAACGGGAGTTGTGTTAGCTCCTAAAGGAGAAAGAAATGTTTATGAGGTAGATAATGCGCTCGCCAAAACTTCATTGACTGTAATGTTCACATTTTGTGCTGACGGAGATCTCACTCCTCCAATGGTTATATTTCCAAATAAGCGCCTATCAGCTGACATTACGTCCAAGATTCCGTCAAATTGGGGAATAGGGCTTAGCGACAACGGGTGGATGAAAGCTGAAGTCTTTCACGATTACATCGAGAGTGTATTAAACCCTCACTTGATTAAAAAAGGCACTCAATTCCCCATAATATTGTTTGTCGACGGTCACAAGACCCATTTAACATTTGCTGTTAGTGAGCTATGTAAGAAATTGGAAATTGTCCTGATTGCATTATACCCCAACTGTACCAGATTACTGCAGCCAGCTGATGTGTCAGCATTCAAGCCATTGAAATCTGGTTGGCAGAAAACTGTTTTGGAGTGGAGGCGAAATAATCCATCAGTCGCTCTTACTAAGAACAATTTCGTACCGCTTCTAGACAAAACTATCAAAAACACGATCTCAACATCTACAGTTATTAATGGATTTAGAGCTACAGGTCTTTGCCCATGGAATATGAACGCCGTGGACTATACAAAATGTCTTGGGAAGGCAAATATTCCGCAAGCAGAAACTTTTAATAAAACGGACAATGAAGAACTAAAAGCGATGACCCAAGAAGATTTCAGGAATATTATAGGAGCAAGCAAAATAAGTCAAATTGAACTAGGTGAACTAAAGCCAGAAGaaaactatttgaaaataatttggaactTTTTCAAGGAAgtgcaaaatacaaaaaacaaagaCAATACTTCCAGTCAACAAGATGCGGATATGACATTAGATGCAATGCATATTGAAAATATGCCAGTTATTTTAAGCGAAAACAATACTTCCAGTCAACAAGATGCGGATATGACATTAGATGCAATGCATATTGAAAATATGCCAGTTATTTTAAGCGAAGACTTGAGAGAAGAGCTTTCTGTTTGCATACCTGCACCTGCCTTGGAAGTTATTGTAACAGCAGAAGACTTAAATGATGGCAATGACGATTGTGTATCGGACAATTCACAAGGAGTTTTACATTTATCTCATAAAGCAGAAGTGTATGATGCTAAGACTGAAAATACGAGAATTTCAGTTCTGTCTCAACAAATTAAACACCCCATGAAAACATTCACACAACAACAAAGTTCCGAGTTTGATAAAATAGAAACTTACATTGATCCAGCACCTGTAAAGATGCCTGCCATGTTAAACCTTACTCCTATTAAATTAACCGATGTCCTTGTATTACCAAAATCACCTCAACGAAAAGGCGTTAGAAATATAAAGAGAGCTCCTTTTGTATTGACTTCTGATAAATGGAGATCTATAGAAAGCGAAAAACTCCGCGTAAAGCAGGAAAAAGAAGAAggcataaaaaaaagaaaagaagaaagagaaaaaaagaaattagaAGCAAAAACTAAACAGACAATACGAAAAGTACCGGCAGCAAAGTTGAAAATTAAGAAGGAACACCAAAAAGTAAATGCAGGTGTGAAGAAATTTACGCCATCTAAAAATTTGGATACCGTAGATATCACGCTGATACCACCTGCAAACATAGATTGTACACCAGTTGAAAAACAACAGGATAAGGAAAATTACATTGACTATGATAATTTAATTCCTGAAAATAAGGATAGCAAACAAAAGATATTACACACTGATGCTGACATAGAGAAGTTTTTGACTGAATTTGATACCCCAGACGTTTAA
- Protein Sequence
- MKPKNKTKKKPKDICRRKLYNKENLNKALQAVKDGMSKKLAAKTYNVPRATLQYRIKNPDHQSRPGPPTILTEKEEKDLEDWIILSCKKGFPKRKDDLMSSVSNFLKNSNRASVFKNGEKWYKLFLQRHPNISVRTPEAVTAASAAVSQNDVKGWFSQIEEYLKENDFFEILADPSRVFNGDETNFLLCPKTGVVLAPKGERNVYEVDNALAKTSLTVMFTFCADGDLTPPMVIFPNKRLSADITSKIPSNWGIGLSDNGWMKAEVFHDYIESVLNPHLIKKGTQFPIILFVDGHKTHLTFAVSELCKKLEIVLIALYPNCTRLLQPADVSAFKPLKSGWQKTVLEWRRNNPSVALTKNNFVPLLDKTIKNTISTSTVINGFRATGLCPWNMNAVDYTKCLGKANIPQAETFNKTDNEELKAMTQEDFRNIIGASKISQIELGELKPEENYLKIIWNFFKEVQNTKNKDNTSSQQDADMTLDAMHIENMPVILSENNTSSQQDADMTLDAMHIENMPVILSEDLREELSVCIPAPALEVIVTAEDLNDGNDDCVSDNSQGVLHLSHKAEVYDAKTENTRISVLSQQIKHPMKTFTQQQSSEFDKIETYIDPAPVKMPAMLNLTPIKLTDVLVLPKSPQRKGVRNIKRAPFVLTSDKWRSIESEKLRVKQEKEEGIKKRKEEREKKKLEAKTKQTIRKVPAAKLKIKKEHQKVNAGVKKFTPSKNLDTVDITLIPPANIDCTPVEKQQDKENYIDYDNLIPENKDSKQKILHTDADIEKFLTEFDTPDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826841;
- 90% Identity
- iTF_00826865; iTF_00826841; iTF_00826840;
- 80% Identity
- iTF_00826865;