Hpun009199.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438798.1:22303002-22306183[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00083 0.21 12.7 0.0 7 40 21 53 20 57 0.87 2 2 1e-05 0.0026 18.8 0.0 15 40 295 319 287 323 0.89
Sequence Information
- Coding Sequence
- atGCCTAGAAAACGCGTGAGGAAGACTCAGAGGGGTCAGAGCGACTTGTCCAGCTATGCAGCTGCCTATGATGATGTTAAACAGGGAACTTCTTTACGTGTAGCTTCAGAAAAGCATGGAGTAAATCGCATGTCTTTATTGCGATACTTACGGAAACGGGATGAAGCCAATGACGATGAAGGTACAAGTTCTACTATTACAATGGGGTACAACGCTCATAACAAAGTGTTTACTAGTGATCAAGAAAATGAACTGTCAAAATATCTGATCCGTTGTGCTGACATTTATTTCGGTCTGGCTCCAAAAGAGGTGCGAAAATTGGCTTTTCAGCTTACCGTCAAGTACAATTTGAAGCGACCGGCTACTTGGCTCGAAAATGAGATGGCTGGCGAAGAGTGGTTTCGCTCTTTTATGAGGAGAAACCCTGAATTATCAGTTCGTGCTGCACAAGCAACAAGCCTTTCCAGAGCaacaagttttaataaaagAAATGTTGAAGCTTTTTATGACAATTTACAAATTGTTTTGGACAGACATAATTACGAACCTCAAAATATATACAATGTTGATGAAACGGGCGTTACGACAGTCCAAAAACCAGATAAAGTTGTAGCGAAACGTGGTACGAGGCAAGTCGGTGCCGTTACTTCAGCCGAACGGGGTACCTTAGTTACTCTGGCTTTCGCAGCAAATGCAATAGGAAATGCTATTCCgcctttatttatatttcctcGGGTTCGTTATTATGACCACTACGTTAGAGACGGGCAGGTGGGATCTATTGGTAGGGTAGACTGGATGCCTAGAAAACGCGTAAGAAAGACTTCAAGAGGAGAAAGCGAGATATTCCGATATAGAGATGCTTACAATGATCTTAAAACTGGAGTTTCTTTGAGACAAGCGGCAGATACTCATGGTATTAACTATGTCTCCCTGCTACGGTACAAACGAAAGAGAGATACAGCGAACGAAAGTAATGTGGAGTTGGAAAATGTAACAATGGGATTTAGAGCGcataacaaaatttttacagaaGACCAAGAACGACAGCTTGCCAAATACCTGACTCGTTCTGCAGATATATACTTCGGACTTTCTACAAAAGAGGTAAGAAAGTTGGCGTATGAACTTGCTATAAAATACAACTTGCAGATTCCTCCTACTTGGGTTGAAAACGAAAGGGCTGGGGAGGAGTGGTTTCGATCCTTCATGAAGAGGAACCCTGAGCTATCTGTGCGCGCAGCTCAAGCTACAAGCTTGTCCAGAGCGACCAGTTTCAACAGGACTAATGTTGATACCTTTTATAATAATCTACAAATTGTTATGGACCGTGATCATTTCGAACCTCAAGACATATATAATGTCGATGAAACCGGCGTGACCACCGTGCAAAAACCCGACAGGGTCGTGGCTAGACGTGGCACAAGGCAAGTAGGAGCCATTACCTCAGCTGAGCGAGGCACATTGGTCACATTGGCTTTTGCGGCAAACGCGTTGGGCAATGCTATTCCCCCCATGTTCGTATTCCCTCGCATACGATATCAAGAACATTTCATCAGGGATGGACCTGTGGGTTCCATTGGAACAGGCAATCCATCGGGCTGGATGCAAGATGACACGTTCTTAATTTtcttaaaacatttcaaaaaacatacaaatgCGTCTCCTTCACACAAAGTTTTGCTAGTTTTGGACAACCACTCATCCCATATACACATAAATTCTCTAGATTTCTGTAAAGAAAATGGAATAGTTCTATTATCGTTTCCACCCCACTGCTCACACAAACTCCAGCCCCTGGATCGATCTGTGTACGGACCTTTGAAAAAAGCCTTCAATACAGCCTGTGACGCCTGGATGCGAAATCATCCAGGAAGAACTATGACCATTTACGACATACCCGGTATTACGACAACCGCAATGCCACTTGCTCTGACCCAATCAAATATTCAGGCTGGTTTTCGAAAGACAGGAATATACCCTTTCAACCGTGACATATTTCAAGATATTGACTTTTCGCCTTCATTTGTGACAGACAGGCCAAACCCAAACAATATAGAAGAAGTGATTATGGATCAGAACATTCCTGTATCGGCTCCTAACGATGAAACACCACCGCTATCACCTTCGTTGTGGAACGAGGCTTCAGCCAGCCTAGTAGCTTCAATACAAAACGCTGAAATTCATATTCCTGAAAACATTGACGGCCTAGCGACTACTACACCACCAAGACAAATACCTGATCAGCAACCATCGCCTAAGCCGTCTACGAGCCATCAAATACCTGATCAGCAACCATCGCCTAAGCCGTCTACGAGCCGTCAAACAATATTTTCACCAGAGGCAATACGGCCCTACCCAAAAGCTGCCCCTAGGAAAACTGCAAATAGGGGtcgaaaaactaaaaaatctgcAATTTATACAGACACCCCTGAAAAGGAAGCTGTTAGAAAGGAGTATGAAGAGCGACAGAAAAGATTGAAAGATAAACAAGTGAAGAAAAAAGTATTAGAATCATCGACTGGTATGAAACACAAAGGTAAAGGAAAGGGAAAAGCAAGAAAGAAAGCTAACACACCACCTGCATCATCAGAAGAAGAAGAGTATTATTGCCTGGTTTGCCTAGAAGCCTTCTCAGATAGTAGATCAGGTGAAAAATGGGTACAATGCCAAGGGACCTGTCGTCTTTGGTCACACATTGATTGTACCGACGGTAATAGATATTACATCTGTCATAATTGCAGTGAATCTGATTAA
- Protein Sequence
- MPRKRVRKTQRGQSDLSSYAAAYDDVKQGTSLRVASEKHGVNRMSLLRYLRKRDEANDDEGTSSTITMGYNAHNKVFTSDQENELSKYLIRCADIYFGLAPKEVRKLAFQLTVKYNLKRPATWLENEMAGEEWFRSFMRRNPELSVRAAQATSLSRATSFNKRNVEAFYDNLQIVLDRHNYEPQNIYNVDETGVTTVQKPDKVVAKRGTRQVGAVTSAERGTLVTLAFAANAIGNAIPPLFIFPRVRYYDHYVRDGQVGSIGRVDWMPRKRVRKTSRGESEIFRYRDAYNDLKTGVSLRQAADTHGINYVSLLRYKRKRDTANESNVELENVTMGFRAHNKIFTEDQERQLAKYLTRSADIYFGLSTKEVRKLAYELAIKYNLQIPPTWVENERAGEEWFRSFMKRNPELSVRAAQATSLSRATSFNRTNVDTFYNNLQIVMDRDHFEPQDIYNVDETGVTTVQKPDRVVARRGTRQVGAITSAERGTLVTLAFAANALGNAIPPMFVFPRIRYQEHFIRDGPVGSIGTGNPSGWMQDDTFLIFLKHFKKHTNASPSHKVLLVLDNHSSHIHINSLDFCKENGIVLLSFPPHCSHKLQPLDRSVYGPLKKAFNTACDAWMRNHPGRTMTIYDIPGITTTAMPLALTQSNIQAGFRKTGIYPFNRDIFQDIDFSPSFVTDRPNPNNIEEVIMDQNIPVSAPNDETPPLSPSLWNEASASLVASIQNAEIHIPENIDGLATTTPPRQIPDQQPSPKPSTSHQIPDQQPSPKPSTSRQTIFSPEAIRPYPKAAPRKTANRGRKTKKSAIYTDTPEKEAVRKEYEERQKRLKDKQVKKKVLESSTGMKHKGKGKGKARKKANTPPASSEEEEYYCLVCLEAFSDSRSGEKWVQCQGTCRLWSHIDCTDGNRYYICHNCSESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -