Hpun019546.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- clz9
- Assembly
- GCA_949316475.1
- Location
- OX438805.1:14261538-14264443[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-11 2.5e-08 34.9 0.0 3 39 16 52 14 57 0.91
Sequence Information
- Coding Sequence
- aTGGTGCGAAAATATAtacgaaaaaaagaaaaacaatactCACTAGACGATCTTCATAAGGCAGTTGAAGATGTTCGCAGTAAGAAAATGAATTCTTATCAAGCTGCAGATGTATATGGCATACCAAGATCCACAATAGTATCAAGACTATCTGAGACACATGCTATGAATGATAGACCAGGTAGACCGACAGTGTTTTCTTTCGATTTTGAAAGTAATATAGCAAAGTGTTTGCATATCATGGAAAAAAATGGGTTCCCTTTGACCAGAAAAGAAACCAAAATATTGATATCGGAATATGTCCGTCGTAATGGCATAGTAACTCCGTTCAAAGACGATATACCTGGGAAAGATTGGTTTCATGGATTTCAAAAAAGGCACAATCTCAGCATCAAAAAGCCCCAGTCAGTTGAGATGGCCAGACGTAAGGCCTGCGATCCATTTATAGTGTACGGATATTTTGATATGCTAGAAAAGGTGGTTGAAGAATTGGGATTATCAGACAAACCGAAGCAAATATATAACTTGGACGAAACTTGTTTATGTAGCGACCCAGTAAAAGGAAAAGTGCTCGGGAAAAAAGGATACCAATCCACAAGAACAACAAGTGGCCCTGGACGCAACAACACCACTGTTCTCCTAGCGATTAATGCAAATGGTGACAAAGTTCCGGCACTGATTATTTTCCAAGGAAAACATTTGTGGTCGGAATGGgtgtataaaaacaaaaacgtaAAAACAGCTTATTCTGTCAGCGAAAAAGGATGGATGGAAACATCAATATTTGAAAAGTATTTGAGAGAAACATTTGTGCCTGCGATTGGCAAAGAGCGACCTGTGCTGCTTATATTTGATGGGCACGCTACTCATGTTGATTTAAGCGTCATAAAATATGCAGCATCCGAAGGTATTACAATCCTGAAATTACCACCACACTCATCTCATATACTCCAACCATTGGATTGTAGTACAATGAAACCGCTGAAAGATAGATGGGAAGAAAAAATAATCCAATGGCAGAGGCTGCATATTGGTGTCAACCTACCAAAAGGCGAATTCGCTAGGCTCCTGACTGAAGTTTGGGATGAAATAAACCCTGTTATTCTCCAGAATGGCTTTAAAAGAACCGGGATATATCCGATAAATCGATCCGCCATTCCGAAAGAGTTATTTGATGTTTTGACATTGCagaaatgggaaaatgctcaaGCACGGCTTGTTGAAAAAGACAAACCCCAACCAGAAGACGTTATGGATCCCGATGTAATGAACTATGTTGAAAATACAAATGAGAGCAACACAGTTGTTGTTCCAAGCTTGTTAACAATGACTGAAGATCATGAAAAAAAAGAGAAGATAAGACTggataaactaaaaaaaagggatgctaaactacaaaataaagaaaaaaagataCAAAAAACACAAGAAAAACGAAACaagaaacaacaacaaaagaaaTCAGGTAATAATCTGAAGAAAAAAACACAGCAGAAGAAGAAATATAAAGAAAAGATCACAGAAACTGATGATAGCGATAGCAGTGGTTCATACGAATCAAAAAATGACTCCGAAGACGAAGATATGGAAAGCTATTTCAAAAGTATTTTGCTTGCACAGCAACTTGAAGACGACGAAATGCTATCCGAAAAAGATTTTGTTGCTGACGCTAACAAAATAACGGAACAACCAAACAAACCTTTTTCTCGTGATAGTGTAGATCTGTCAGCCACTTCCTCGAATACACAAGATCCAGCTTATAGTTTTTTCAAGACGCAAGATCCAGAGAAAGACAAATTCGTTCTGGCTAAATTCAGTTCAAGTAAAGGGAAGAAGACTTATAAATATGTGTGCCTGATAGAAGACCTGATCGACGAAAAACTAGTTGTGCAGGGTTtcaaTAAGAGAAGGAAAGTTAACAATAAAGATGCTTGA
- Protein Sequence
- MVRKYIRKKEKQYSLDDLHKAVEDVRSKKMNSYQAADVYGIPRSTIVSRLSETHAMNDRPGRPTVFSFDFESNIAKCLHIMEKNGFPLTRKETKILISEYVRRNGIVTPFKDDIPGKDWFHGFQKRHNLSIKKPQSVEMARRKACDPFIVYGYFDMLEKVVEELGLSDKPKQIYNLDETCLCSDPVKGKVLGKKGYQSTRTTSGPGRNNTTVLLAINANGDKVPALIIFQGKHLWSEWVYKNKNVKTAYSVSEKGWMETSIFEKYLRETFVPAIGKERPVLLIFDGHATHVDLSVIKYAASEGITILKLPPHSSHILQPLDCSTMKPLKDRWEEKIIQWQRLHIGVNLPKGEFARLLTEVWDEINPVILQNGFKRTGIYPINRSAIPKELFDVLTLQKWENAQARLVEKDKPQPEDVMDPDVMNYVENTNESNTVVVPSLLTMTEDHEKKEKIRLDKLKKRDAKLQNKEKKIQKTQEKRNKKQQQKKSGNNLKKKTQQKKKYKEKITETDDSDSSGSYESKNDSEDEDMESYFKSILLAQQLEDDEMLSEKDFVADANKITEQPNKPFSRDSVDLSATSSNTQDPAYSFFKTQDPEKDKFVLAKFSSSKGKKTYKYVCLIEDLIDEKLVVQGFNKRRKVNNKDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825556; iTF_01161272; iTF_01161287;
- 90% Identity
- iTF_00825556;
- 80% Identity
- -