Hpun007003.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438797.1:13871478-13875203[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-12 1.9e-09 38.5 0.0 4 36 45 77 42 86 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAGTCGAGAGGAATACTTCAACGGTCTCGATCTCGATTCTTGATGTTCGAATTAAAggACATAATGATGTCAAATGATGAAGGTGAAAATAAAACGAAGAAAAAGAAGGGCACCTGGGATCCATATAAAATGCATACAGCCATAGAAAGAGTTTTGAGCAAGGAAATGAGTGCGCGCCAGGCAGCCGATAGATACGAGGTTCCAAGAACTACATTAAATGATAGAATAAGTGCTATTAAAAACGAGAAAGAGGTATCAATAAAGCCTGTTATGGGTCGTTTCTACAAAACATTCTCACCTGAACACGAACAAGTGTTGTCAGAACATGTTAAGAACTTGGCAAATAGGCTGATGCCCTTTAAATAA
- Protein Sequence
- MSESRGILQRSRSRFLMFELKDIMMSNDEGENKTKKKKGTWDPYKMHTAIERVLSKEMSARQAADRYEVPRTTLNDRISAIKNEKEVSIKPVMGRFYKTFSPEHEQVLSEHVKNLANRLMPFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826766; iTF_00826767; iTF_00826775;
- 90% Identity
- iTF_00826766;
- 80% Identity
- -