Hpun025586.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438809.1:15493822-15494205[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-12 1.8e-09 38.5 0.0 2 37 12 46 11 52 0.92
Sequence Information
- Coding Sequence
- ATGTCTCTTTCGAGGCCCATATTACAATACCTTGAAGACAAACTAACCCAAGCTTTAGACGCTATCAGAAATGGCATGCCAATTAGAGAAGCTAGTAGAAACTATGGGGTTCCTCGAGGCACAATTCAAGATAGACTTCATATTCGAGTTCCTGAAGGTCCTAAAAAAATTGGGCCCGACTCTGTCCTCAACAAACTAGAAGAAGCGGAAATTGCAACGTGGCTGAAAGACATTGCAACTTGTGGTTTCGGAAAGAAGCCTGatgatttatttaatactgtCCAGGACATAATGATTGAAGACGGCAGGCCCAATCCGTTTGTAAATGGAAGACCAGGCAAGAAGTGGATGAAGTCTTTTTTCAAATGTAACAATATGTTTTAA
- Protein Sequence
- MSLSRPILQYLEDKLTQALDAIRNGMPIREASRNYGVPRGTIQDRLHIRVPEGPKKIGPDSVLNKLEEAEIATWLKDIATCGFGKKPDDLFNTVQDIMIEDGRPNPFVNGRPGKKWMKSFFKCNNMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826789; iTF_00261772; iTF_00826867; iTF_01280126; iTF_00826758; iTF_00826756; iTF_00826763; iTF_00826779; iTF_00406639; iTF_00842584; iTF_00826784; iTF_00826785;
- 90% Identity
- iTF_01280126;
- 80% Identity
- -