Hpun031490.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438813.1:22708537-22709013[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-12 1e-09 39.3 0.1 1 43 9 51 9 52 0.93
Sequence Information
- Coding Sequence
- ATGCCTCCACGTCAAGCTCCGTGGACTCAAGAAAACTTGCGTTCTGCTATGGCAGCCGTACAACGAGGGCAGTTGACGCAGCGTGGTGCAGCAGAGCGATATAATATACCTAGACGTACGCTAAGGAACCACTTGAAAAGTGGAAATACATTGCGATGTTTAGGACGCCGTTCAATTATGACTGAGGCTCAAGAATGTGATCTTGTCAACAGAATCATAAGATTTGCAAATATAGGAATGCCACTTACTCCAAAGCTTATTCATAGACAAGCATTCatcttttgtgaaaaatatgagCTGAAACATAACTTCAACGCAGACATTGGCCTTGCTGGCAAAGACTGGCTAAAGATGTTTTTGAAACGGCATCCAGAAATTTCAAAGAGAAAGGCACAGTTCATGAATCCAGCTAGGGCGCAATCGTTAGCCAACACTTCTCAGAAATCAAAAAAATTTATGACGAGCTTGAAATTATAA
- Protein Sequence
- MPPRQAPWTQENLRSAMAAVQRGQLTQRGAAERYNIPRRTLRNHLKSGNTLRCLGRRSIMTEAQECDLVNRIIRFANIGMPLTPKLIHRQAFIFCEKYELKHNFNADIGLAGKDWLKMFLKRHPEISKRKAQFMNPARAQSLANTSQKSKKFMTSLKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264340;
- 90% Identity
- iTF_00276231; iTF_00276234; iTF_01264340; iTF_00071319; iTF_00071320;
- 80% Identity
- -