Hpun032615.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- -
- Assembly
- GCA_949316475.1
- Location
- OX438814.1:18019559-18020371[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-13 1.7e-10 41.8 0.2 1 41 9 49 9 52 0.90
Sequence Information
- Coding Sequence
- ATGCCTCCACGTCGAGCTCCGTGGACTCAAGAAAACTTGCGTTCTGCTATGGCAGCCGTACAACGAGGGCAGTTGACGCAGCGTCGTGCAGCAGAGCGATATAATATACCTAGACGTACGCTAAAGAACCACTTGAAAAGTGGAAATACAATGCGATGTTTAGGACGCCGTTCAATTATGACTGAAGCTCAAGAATGTGATCTTGTCAACAGAATCATAAGATTTGCAAATATAGGGATGCCACTTACTCCAAAGCTTATTTGCAGACAAGCATTCatcttttgtgaaaaatatgagCTAAAATATAACTTCAACGCAGACATTGGCCTTGCTGGCAAAGACTGGCTAAAGATGTTTTTGAAACGGCATCCAGAAATTTCAAAGAGAAAGGCACAGTTCATGAATCCAGCTAGGGCTGAAGAAAATATCGAAGACAGCGATGATTTTGGTTCTGATGACAACGTACCTTTGGCGAACCTCAAAGACAATAAATTTAGGTCTCCTTTTCAAGAACTACTGCCAACGCCAAACTACGCTGTGACAAAGAATAAACCTAGGAGAAAAGCTATCAATTATAAAGGCCAACGAGTCACCAAAGATCTGTTTAAGGAACAAGAAACATTGAAAGAAAATAAGTTGACAAAGAAAAGAAAACCCAATGAATCAGGGAAGAagactaaaaatgaaaaaaagaaacgaTCTAAAGgggataaaagaaaaagaagacagTGTGTTAAATGCAGAATATGGTACCACGAAGAATGCCTAGGGCTAACCAAAAAtgataagatttttttactgTCAAAACTGTGA
- Protein Sequence
- MPPRRAPWTQENLRSAMAAVQRGQLTQRRAAERYNIPRRTLKNHLKSGNTMRCLGRRSIMTEAQECDLVNRIIRFANIGMPLTPKLICRQAFIFCEKYELKYNFNADIGLAGKDWLKMFLKRHPEISKRKAQFMNPARAEENIEDSDDFGSDDNVPLANLKDNKFRSPFQELLPTPNYAVTKNKPRRKAINYKGQRVTKDLFKEQETLKENKLTKKRKPNESGKKTKNEKKKRSKGDKRKRRQCVKCRIWYHEECLGLTKNDKIFLLSKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826782;
- 90% Identity
- iTF_00826791; iTF_00826782; iTF_00826781; iTF_00826777;
- 80% Identity
- -