Basic Information

Insect: Hypomecis atomaria
Gene Symbol: B0310.2
Assembly: GCA_964007245.1
Location: OZ023307.1:10591917-10623105[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6 1.5e+02 4.3 0.7 1 23 331 353 331 353 0.86

2 11 0.0026 0.24 13.1 1.2 1 23 360 383 360 383 0.93

3 11 0.32 30 6.5 0.2 1 23 387 409 387 409 0.92

4 11 0.0051 0.47 12.2 1.2 1 23 414 437 414 437 0.98

5 11 0.0017 0.16 13.7 0.6 1 23 441 464 441 464 0.97

6 11 9 8.2e+02 2.0 0.3 2 21 477 496 477 497 0.85

7 11 0.21 19 7.1 0.2 2 23 551 573 550 573 0.96

8 11 0.013 1.1 11.0 0.5 2 20 589 607 588 610 0.92

9 11 0.00013 0.012 17.2 2.9 1 23 616 638 616 638 0.97

10 11 0.00088 0.081 14.6 2.9 1 23 645 667 645 667 0.98

11 11 9.8e-05 0.009 17.6 2.1 1 23 673 696 673 696 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6	1.5e+02	4.3	0.7	1	23	331	353	331	353	0.86
2	11	0.0026	0.24	13.1	1.2	1	23	360	383	360	383	0.93
3	11	0.32	30	6.5	0.2	1	23	387	409	387	409	0.92
4	11	0.0051	0.47	12.2	1.2	1	23	414	437	414	437	0.98
5	11	0.0017	0.16	13.7	0.6	1	23	441	464	441	464	0.97
6	11	9	8.2e+02	2.0	0.3	2	21	477	496	477	497	0.85
7	11	0.21	19	7.1	0.2	2	23	551	573	550	573	0.96
8	11	0.013	1.1	11.0	0.5	2	20	589	607	588	610	0.92
9	11	0.00013	0.012	17.2	2.9	1	23	616	638	616	638	0.97
10	11	0.00088	0.081	14.6	2.9	1	23	645	667	645	667	0.98
11	11	9.8e-05	0.009	17.6	2.1	1	23	673	696	673	696	0.93

Sequence Information

Coding Sequence: ATGAGGTGTAGTGTTCAGAACTGTTCCAATGACACCAAGAATACAACAAAGAGCCATGGAATCACTTTTCACCTATTTCCAAAGGAGCCGATTCTTCGCGCAGCCTGGATAGATGCCCTCGCCCTCACTGCCTGGGAGCCCAAAGAACGTAGCACGGTGTGCTCGGAGCACTTCAGAAACGAAGACTTTTATGAGACCAAGTCGGGGCTCAGGAAGATCAGGAAGGAGGCTGTTCCTGTTGCTGTCATGGTATCCGAGGAAGAGCTAGACGCGTCGGCAGCGCTCCTCGCGTGCAGGATATGTCTCGCGACCGACGTCACCATGGTCGACATCAGAGATCGCGAGCTGGACCAGCAGTATGAGCAAATCACGGGCATTTTTtTTGGTATAGAAGACCGGCTGCCTCAGAGGTTGTGTTGGGAGTGCGGCCACCGACTCAGAGCTGCTGCAGCGTTCAGAACCAAGGCAGTCAGGGCTCACGGCGTACTGGCTGATATACTACAATCCACTGCCTATGTAAATAACGGCACGGAATATAACGGTAACGAATATGCAGTTGCAGATAATGGGTATAACGATAATGACGAAGGCAAAGTGTTAGATAACATAATGGAAGTTGAAGTCAAAGATGAGACGGCCAATGAGATATTTTTCGACGAATATCTCGATAATTTTGAATCGgatgatgacaaaaaattgagcgAAATATATCCAAATGTTAtggaaaagaaaaaagttaaagtaaagaaaaagaaaatagtgGAGAAAAAAGTGAGAGTGGTCAAGAAGAAAGAAGATAATTGTGATGTGAAGAAGAATCAAGAAGAAGATGGACTTAGTTTGTTAGACAAATATAAAACCAATGAAATAAAACGGCGTAAAAACGATGGACCGGACGAGAATCTGTTCACGATAACTTCTCTGACGTACGAGGAGCAAATAGCAGAAATAGAGAAGCGACAAGAGAGCACCCTGTACAGGAACGCGGTGTTCAAGTGTACAGTGTGTTACCGAGGGTTTCAGATTAAAGAGAGATACGACGCTCATGTAGTGAGACATAGCGAGCAATGCGGAGCGTACGAGTGCTTCATCTGTAAAACCCGGCTCAAAACCAGTCGAGCTTTAAGAAAACACCTCACCGCTCAACACACGGAGAAATTCACGTGTAAAGGCTGTCCGTTCGTCACTAGGAATAGAGGCGTGGCAAGGGAGCACGAGAAGTGGCACTCAGGGACCAAATACCAATGCCCGCACTGTCCGAGCACTTTTGAaaaaatcaCAACCTACATGGGTCACATACGAATAAAACACGTGTCGGATTTTGTGTGTGAACTGTGTGGCTTCACATTCGTCAGTCAGAAGGGAATCGAGGTTcataagaagaaaaaacacaGACTGCATGACCGGAATGTGGAACTCAGTGGGCCATACTGTGAGCTTTGCAAAGTGAAGTTTGTATCGGAAGAGgcgcattccaggcatctgAAGCTGTCCGCGAGGCACAGCAGTGATAATGACCCGAACAGAATACGAAATGACTCGCAAAGTATGCGTGGCGATCAAAGCGGGAAACTTCGTCAAATGCACGACAGACGGACGAACATACACCCGAGGGGGGGTGATGTCATAACGGGGGGGAGGGGACCCGTCACCTGCGAACAGTGTGGGGTCCAACTTAGAGATTTAAGACTGTACGCGCAACATTTCCGTCGCGCGCATCCCGACAAGAATCGTACGAAATATCCCGCGATGAAGACACCCTGTATGTGCGAGCAGTGCGGACGGATATTCCAGAGCATGGCCCTCCTGAAAGACCACATGTGGGTACACACGGGAGAAAAACGCTTCAAATGCGCGCACTGTCCCAAAAGCTTCACCCAGAAGACCAACCTGGTGTTCCACGAGCGCGTCCACTCGTCTACACGGCCGACGTACGAGTGCGGCCTGTGTGGGAAACACTTCGCGTTTTATAACAACAGGAGGCGGCATATGTTCATCCACACAGGCCTGAAGCCATACAAGTGCGAGACTTGTGGTAAATGCTTCACGACGGCGGGCGAGCAACGCGCGCACGTAGAACACGTACATCTGAAGAAACCCTGGCCACGGCGCGCGAGGAGGCACGGCCAGGGACTCGTGGACAATAGCGAGGACTGA
Protein Sequence: MRCSVQNCSNDTKNTTKSHGITFHLFPKEPILRAAWIDALALTAWEPKERSTVCSEHFRNEDFYETKSGLRKIRKEAVPVAVMVSEEELDASAALLACRICLATDVTMVDIRDRELDQQYEQITGIFFGIEDRLPQRLCWECGHRLRAAAAFRTKAVRAHGVLADILQSTAYVNNGTEYNGNEYAVADNGYNDNDEGKVLDNIMEVEVKDETANEIFFDEYLDNFESDDDKKLSEIYPNVMEKKKVKVKKKKIVEKKVRVVKKKEDNCDVKKNQEEDGLSLLDKYKTNEIKRRKNDGPDENLFTITSLTYEEQIAEIEKRQESTLYRNAVFKCTVCYRGFQIKERYDAHVVRHSEQCGAYECFICKTRLKTSRALRKHLTAQHTEKFTCKGCPFVTRNRGVAREHEKWHSGTKYQCPHCPSTFEKITTYMGHIRIKHVSDFVCELCGFTFVSQKGIEVHKKKKHRLHDRNVELSGPYCELCKVKFVSEEAHSRHLKLSARHSSDNDPNRIRNDSQSMRGDQSGKLRQMHDRRTNIHPRGGDVITGGRGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCAHCPKSFTQKTNLVFHERVHSSTRPTYECGLCGKHFAFYNNRRRHMFIHTGLKPYKCETCGKCFTTAGEQRAHVEHVHLKKPWPRRARRHGQGLVDNSED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143130;
90% Identity: iTF_00825841;
80% Identity: iTF_00825841;