Hato033394.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- -
- Assembly
- GCA_964007245.1
- Location
- OZ023305.1:12661826-12687249[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.023 2.1 10.1 1.1 1 23 230 252 230 252 0.99 2 29 0.078 7.1 8.5 3.0 1 23 259 281 259 281 0.98 3 29 0.0013 0.12 14.0 1.3 1 23 285 308 285 308 0.97 4 29 0.021 1.9 10.3 0.2 1 13 315 327 315 331 0.87 5 29 0.00022 0.02 16.5 1.5 1 23 716 739 716 739 0.97 6 29 0.0014 0.13 14.0 0.7 2 23 746 768 745 768 0.96 7 29 0.00042 0.038 15.6 0.7 1 23 779 801 779 801 0.97 8 29 0.0022 0.2 13.3 0.2 1 22 807 828 807 832 0.94 9 29 0.021 1.9 10.2 2.5 3 21 842 860 840 863 0.95 10 29 5.2e-05 0.0047 18.5 0.5 1 23 869 892 869 892 0.98 11 29 3.3 3e+02 3.4 1.1 1 10 901 910 901 913 0.89 12 29 3.3 3e+02 3.4 1.1 1 10 924 933 924 936 0.89 13 29 3.3 3e+02 3.4 1.1 1 10 947 956 947 959 0.89 14 29 3.3 3e+02 3.4 1.1 1 10 970 979 970 982 0.89 15 29 3.3 3e+02 3.4 1.1 1 10 993 1002 993 1005 0.89 16 29 2.1 1.9e+02 4.0 0.7 1 11 1016 1026 1016 1028 0.89 17 29 3.3 3e+02 3.4 1.1 1 10 1039 1048 1039 1051 0.89 18 29 3.3 3e+02 3.4 1.1 1 10 1062 1071 1062 1074 0.89 19 29 3.3 3e+02 3.4 1.1 1 10 1085 1094 1085 1097 0.89 20 29 3.3 3e+02 3.4 1.1 1 10 1108 1117 1108 1120 0.89 21 29 3.3 3e+02 3.4 1.1 1 10 1131 1140 1131 1143 0.89 22 29 3.3 3e+02 3.4 1.1 1 10 1154 1163 1154 1166 0.89 23 29 3.3 3e+02 3.4 1.1 1 10 1177 1186 1177 1189 0.89 24 29 3.3 3e+02 3.4 1.1 1 10 1200 1209 1200 1212 0.89 25 29 3.3 3e+02 3.4 1.1 1 10 1223 1232 1223 1235 0.89 26 29 3.3 3e+02 3.4 1.1 1 10 1269 1278 1269 1281 0.89 27 29 2.1 1.9e+02 4.0 0.7 1 11 1292 1302 1292 1304 0.89 28 29 0.00032 0.029 16.0 3.1 1 23 1315 1337 1315 1337 0.98 29 29 0.00035 0.032 15.9 0.3 1 23 1343 1366 1343 1366 0.96
Sequence Information
- Coding Sequence
- ATGGCGCAAAATGCTGAACTGTTCATACAAAATGTGCAAAGGAATCAGGTTTTGCTCCAAAACTGCATTGGGgATTTAGTGACCACAATAAAAGAAGCTCGCTCACAGTTCAATCCATTAATAACCCTCTCCCAATCGCCAGTAGAGTCTATATATCTcaatgaaaaaaacaaaatagaccTTATAACTTTAGACAATGAGTTCAAAATACACGAACACAGTACCTGCAATAAGTTCCAAAATAGCACATACGAAGTGATGATTACAAGTGAAATCAAAAATGATGAAGAAAATGTTGAAATGGAGAAGAGGAATATAAAAGTAGAATTGAAAGTTGAAGAGGATGCAAATTTGGATTTGGAGGATAGAGgattagatgatgatgatgAATCTCCAGACCAACAAGACCCATCCATAAAGGAAGAAGAGGTAGATGACGATTTTCCTCTTAATTATCTGAAAAATGAAGTAAAAACGGAAGCCATTCAGAAGACTGTAACACCGCCCGAAAAACAATATGTTATTGAAATAGATGGGAATAACGTAAATGACACGATTTTAGATAGAAAAACTCAGATAACGAAACTTAATGAGTCATTAGGAATAAAGAAGATATTAATAACCAAAGAAGAATTAATGGAAGAGAGAAAGCAACAAGCATTGGATAAATCATATTTGGATTGCGCCTACAGGTGTGAAGATTGTATCAAAGGGTTCAACTTTAAAGTTGGCTATGACAATCATATGAAGAAACACAGTGAAGAATCGGGTAGATACAAATGTGACATCTGCAAACTCAGAGTGAATACATACGACAAGTTTTCGAGCCATAAACGATATCACACTGTCCGTTTCCAATGCACCGAGTGCGGCATAGTGCGCACGAGTCGCTCGACACTGGTGGAACATCACAATATGAAACATAAAGAGGGCGATGATCATTTCGCCTGCCCTTACTGCCCTAAGACTTTTAGAACGGCACCGACGTGGAGATTCCCGGAAGATGTTCTAAGTTTTGACGACGGTCTCAAACGGATTTTGGAAGGGATACTTAACGTCCATCTGACTGAGTCCCAGTGGTGTCAAGCCAGCCTTCCCATTCGATTTGGTGGCTTGGGTGTACGTCGGCTTCGGGAAACTGGACCTGTCGCGTTTCTGGCTTCTTCGTGTGGAGTCATGGATCTTGTTACTCGCATTTTACCTACTAATGGTAGCGAGATCCGTATTCCATACGCCGATGACGCCTACAGCGAGTGGTCGGTCTTGGCTTCGGCTGCAAACCCGCCGGAAAGCCCGAAGGGGCAGAGGAGTTGGGACGACGTGCTATCGAAGAGCCACCTTTCGGCATTGTTGAGCGAGAGTTCGGGGGCTGATTTGGCTCGATTGAAAGCCGCCGCAAAACCCGAGTCCGGGGCGTGGCTGAATGCTGTACCCAGTCCACACATGGGCACGCTGCTCGACGATGACTCCTTGCGAGTAGCTGCAGCCCTTCGTCTGGGCAGCAAGATTTGCGAGCCCCACGTCTGCATTTGTGGTGTGGCTGTCGACTCAGATGGCCATCACGGATTGGGATGCGTACGATGTGCCGGGCGAAGACCTCGACATCATGCGCTCAACGATATTTTGAGGCGTGCTTTGGTGTCCGCTGGCATACCTTGTGTCTTGGAGCCCCCCGGATTGTACCGTTCTGATGGCAAACGCCCGGATGGTCTAACTTTGATTCCATGGCAGAAAGGACGCTGCCTCGTGTGGGACGCGACTTGTGTAAGCACATTTGCTTCGTGTCACATCTCAGCTACCCAGTTGTCGGCCGGTGCGGGTGCAGAGGCAGCGGCCCGAGGAAAATGCCTCAAATATTCCTGCATGGAATCGACGTACGACTTTGTCCCGTTTGCCGTTGAGACGGCGGGTTCGTGGTGCTCCGAGGCCAAGGAGTTCGTGCGCTTTCTTGGACGGCGTCTCAGAGAGAGGGGACAGGATCCGCGGTCGGGGGCGTACTTAGCACAGCACATCTCCCTTGCCATTCAGAGGGGCAACGCCGCGAGCATAATGGGCACATTTGGGCGGAATGCACTTTGCGGAGACGTTTCCAATGCTACGACGTTGTTAGACCACGACGCTGTACACAAGCAAGGGAAGATTCAGTTCGTCTGCCCCTACTGTCCCAAGACTTTAAAACGCCAAACGTCCCAAAGGAAGCACGTGAGAAACTCGCACCAGAAGATAGAGCGCGTCACCTGCGAGTTCTGTAACAAGATCTATGCTAGTAAAGAAGCTCTCAAGTCGCATAAGAtgagACAACATCCAAAAGAAGTGGCAGCGAGAGAGAAAAAGTACCCCTGCGAGGAATGTGGCAAACTGTTCCGCTCAACCACATTGCTCAAAGTCCACAAATACAGCCACACCGCCACCCGGGACTACTACTGTGTGGAGTGTGATAAGGCGTTCAAAACGGAAGCCATTTTGAAACAACATCTAAGGAAGGCACAACCCCATGTTACTTACTCGGACCTGCCGTTCGGTTGTAAGAAATGCGACAAAAGATTTGCACTACGACAAGATATGGAGCGGCACATGAACTGCATCCATCTCGAGTCTAAAGATTTCAAATGCGATAAATGCGATAAGGCGTACGGAAGCAAATGGTCCCTGAAAGTCCACGAACGGAGCGTGCACGAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAATACCGCTGCAGTTCCCTTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGCCGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAATACCGCTGCAGTTCCCTTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAAGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCTTGCCACTTCTGTAACAATATATTTGACGTAAGTATAGTTCAGGGATATAAAAGACCGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACGTAAGTATAGTTCAGGAATATAAAAGACCGCTGCAGTTCCCTTGCCACTTCTGTAACAAGATATTCGCCGTAAGTATAGTTCAGGGATATAAAAGACAGCTGCAGTTCCCCTGCCACTTCTGTAACAAGATATTCGACCGCAAGACAATCCTCAATAACCACATACGCACGCACACAGGTGAGCGTCCCTTCCAATGCGACAAGTGTCCCGCCAATTTCAGCCAATCAGGATCCTTGGCCACGCACAAGAAACTCGTGCACCAACGACTTACGAGAGATGGGAAACCCAAGCGAAATGCCGGACTCAAAcatatttag
- Protein Sequence
- MAQNAELFIQNVQRNQVLLQNCIGDLVTTIKEARSQFNPLITLSQSPVESIYLNEKNKIDLITLDNEFKIHEHSTCNKFQNSTYEVMITSEIKNDEENVEMEKRNIKVELKVEEDANLDLEDRGLDDDDESPDQQDPSIKEEEVDDDFPLNYLKNEVKTEAIQKTVTPPEKQYVIEIDGNNVNDTILDRKTQITKLNESLGIKKILITKEELMEERKQQALDKSYLDCAYRCEDCIKGFNFKVGYDNHMKKHSEESGRYKCDICKLRVNTYDKFSSHKRYHTVRFQCTECGIVRTSRSTLVEHHNMKHKEGDDHFACPYCPKTFRTAPTWRFPEDVLSFDDGLKRILEGILNVHLTESQWCQASLPIRFGGLGVRRLRETGPVAFLASSCGVMDLVTRILPTNGSEIRIPYADDAYSEWSVLASAANPPESPKGQRSWDDVLSKSHLSALLSESSGADLARLKAAAKPESGAWLNAVPSPHMGTLLDDDSLRVAAALRLGSKICEPHVCICGVAVDSDGHHGLGCVRCAGRRPRHHALNDILRRALVSAGIPCVLEPPGLYRSDGKRPDGLTLIPWQKGRCLVWDATCVSTFASCHISATQLSAGAGAEAAARGKCLKYSCMESTYDFVPFAVETAGSWCSEAKEFVRFLGRRLRERGQDPRSGAYLAQHISLAIQRGNAASIMGTFGRNALCGDVSNATTLLDHDAVHKQGKIQFVCPYCPKTLKRQTSQRKHVRNSHQKIERVTCEFCNKIYASKEALKSHKMRQHPKEVAAREKKYPCEECGKLFRSTTLLKVHKYSHTATRDYYCVECDKAFKTEAILKQHLRKAQPHVTYSDLPFGCKKCDKRFALRQDMERHMNCIHLESKDFKCDKCDKAYGSKWSLKVHERSVHEGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKIPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFAVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKIPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQGYKRPLQFPCHFCNNIFDVSIVQGYKRPLQFPCHFCNKIFDVSIVQEYKRPLQFPCHFCNKIFAVSIVQGYKRQLQFPCHFCNKIFDRKTILNNHIRTHTGERPFQCDKCPANFSQSGSLATHKKLVHQRLTRDGKPKRNAGLKHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -