Basic Information

Insect: Hypomecis atomaria
Gene Symbol: -
Assembly: GCA_964007245.1
Location: OZ023285.1:3014405-3025860[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.9 2.7e+02 3.5 0.4 2 23 6 27 5 27 0.96

2 14 0.24 22 6.9 0.0 1 23 1027 1050 1027 1050 0.90

3 14 0.31 28 6.6 0.1 1 23 1124 1146 1124 1146 0.97

4 14 8.2e-05 0.0074 17.8 5.0 2 23 1149 1170 1148 1170 0.97

5 14 0.017 1.5 10.6 3.0 1 23 1176 1198 1176 1198 0.98

6 14 0.0087 0.79 11.5 3.4 2 23 1205 1226 1204 1227 0.95

7 14 7.5 6.8e+02 2.2 0.7 5 23 1240 1258 1239 1258 0.95

8 14 0.85 77 5.2 2.8 3 23 1265 1286 1264 1286 0.95

9 14 0.017 1.6 10.5 0.1 2 23 1303 1323 1302 1323 0.97

10 14 7.2e-05 0.0066 18.0 1.2 1 20 1329 1348 1329 1351 0.92

11 14 0.0032 0.29 12.8 0.5 1 23 1359 1381 1359 1381 0.98

12 14 0.018 1.7 10.5 7.3 1 23 1387 1409 1387 1409 0.98

13 14 9.3e-06 0.00085 20.8 0.8 1 23 1415 1439 1415 1439 0.97

14 14 0.0014 0.13 14.0 5.1 1 23 1445 1467 1445 1468 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.9	2.7e+02	3.5	0.4	2	23	6	27	5	27	0.96
2	14	0.24	22	6.9	0.0	1	23	1027	1050	1027	1050	0.90
3	14	0.31	28	6.6	0.1	1	23	1124	1146	1124	1146	0.97
4	14	8.2e-05	0.0074	17.8	5.0	2	23	1149	1170	1148	1170	0.97
5	14	0.017	1.5	10.6	3.0	1	23	1176	1198	1176	1198	0.98
6	14	0.0087	0.79	11.5	3.4	2	23	1205	1226	1204	1227	0.95
7	14	7.5	6.8e+02	2.2	0.7	5	23	1240	1258	1239	1258	0.95
8	14	0.85	77	5.2	2.8	3	23	1265	1286	1264	1286	0.95
9	14	0.017	1.6	10.5	0.1	2	23	1303	1323	1302	1323	0.97
10	14	7.2e-05	0.0066	18.0	1.2	1	20	1329	1348	1329	1351	0.92
11	14	0.0032	0.29	12.8	0.5	1	23	1359	1381	1359	1381	0.98
12	14	0.018	1.7	10.5	7.3	1	23	1387	1409	1387	1409	0.98
13	14	9.3e-06	0.00085	20.8	0.8	1	23	1415	1439	1415	1439	0.97
14	14	0.0014	0.13	14.0	5.1	1	23	1445	1467	1445	1468	0.95

Sequence Information

Coding Sequence: ATGGATTCACTGGTGCAGTGCCCCGTGTGCACGCTGTTCCTCCACAATGGCATGACTCTAGAGTCCCATCTGGACACGCATCCCAAAGACCAAGTCATAAAAGCATTATGCAGTATAGCTAACAAAAACAACAGCTGTGCAAGTAGCAGGACGTCTACCCCTGCTAATTCTGAGAGGTCTTATAGAAGCAGGTCACAGACCCCCGCCCCCGATGATAATGGACGCTGGAACGGTGTACACAGGAACCCGGACCATGACCGCTATTGGGCTAGAACACCAAGCGGGGGTTCGAGTAGAGCACCTAGCAGAACACCAAGTAGGACGCCGAGCCGGAATCAGAGCAGGACTCCAAGATCCACTTCTTCAACTAACATTTCCAGAAATTGCACCCCTGATATTAGGATGGTGGATAATTTAACTTATGAAACAACAACAGTCAGTAGTTCATCACAGCACTCCAATCACTCCCATTCAAATCTTATCAACCCCCCTCTGTCTATGAAAGCTGATAAAATGCAGCAAACATACCCACCGCCGATATCTGATTATGAACAAAAATATCTATTCTACCCGGAGCAGCAAGAAGACAGGGAAATCAAATACTCTCGCAGTGCCGAGTACAATGCCATAGATGTCAATAATGTGTTTTCTTACAATGTGCCAACGGGAACCCCCGGGGTCAAGTTACAGCCTAACATGCCTCATGTGATGAGGAAAAGAAGTGAGCCGGTCAAAGTGCAGATCCAGAAACCTGGTAATATATTGAGCTTAGTCAAAAACAACATTGGGGGAATGCAATACTTGGCTCAGGGTGTGAAGCCAATGCATGTGGTGGTAAGTCCTTCGGCTCCTTCATTTGTTCAAAAGAATGTTCAGAACAGTATGATGGTGAGCGGTGCTCTGCCGACCTCTCAAGTCCACCGAGATTCAAAGACCGCACCTCCATTAGTTCAAAATCACTTCAACCAACTAAGCTCTAGTTCATTTACACCCGGGACCACTGTAGTCACTCAGAACTCCCAGTATTTCTACCAAGAAATGGTGCAGAACATTGATCCAAAGAGTTTCATTCCTAGCATGCCTACAGTGTTCACAGGTCAAGAGAATGTTGCAAATGTTGCTCAAGCTAGCTCAATATACCAGAATGTGATGCTCGTGGATCAGTTTGGGAATACTTCATGCATGTATACTACACCACAACAGATGGTTCCTAAACAGTCTGCCTCTCAAATGTTCACTGATGCGAGTGTACTGATACCCAATACCCAAAAACAAGGTCCTCCTGTGACCGATCAGAATAAAACATTGGTTATAGAAGTGAGCCCTATCATTCCCACTACCCGAATTAGTTCCTGTAATAGTACAGCTAGTAAAGTACTGTCACGTCCACCTCGACAGACTTCTGCAATCGTCTCTAATTTCACACTACCGAAAGCTGAGGCGCCAAATGTTACAATTACTGAAAAGATTGACACTCCGAGTGAAGCCCCTGGGACCACTAGGGGTCTTAAAATTCTTAGCAATATTAAGGTGGAAGTTCCGGTGCAACAtaacaaaaatatgattaaCACTGTGATGGATCTAACGGGGCCTAGTGATCGTGAGTACCCCGTCAGGTCTGCATCACCAGAAAAGATCTTGCCAGACATAGACAACCTCGAACAGAAGTCGTCGCAGGCTTACTCCGAGCCCTCGACGAGTCGAGGCGACAGCTCCAGGGATAGTTCACATTCCTTCCCAGAACTAGAAAAGATCACAAGTCCTACCTCAAACAAAGACTCTAGCAAAACTGATAGTgtagataataaaatagatatggAATTCAGCGACAGCTGTCCAGTACCAGACCTCATATGTAACGAGAAGCCTTCCATATCGCCGATCAGCGAGCTGTCGGAGAGCGGCGACAACTCCACCGACCGCTCGGCGATATCTCCCAAACCAGAAACTAGTAAAATTAGTAACGAATTAGATagcaaagaaaagaaaaatcaaTTGCCAATGAAACCATTTAGGAGTACGCCATTAAGACTGAATAATATTTTCGTGAAGAAAAGTAAGAAAATATTGCAGATAAAGAATTTGAAAACGGTGTCTGACGACGGGCCGAGCCGGCAGGAGGACGAGCCGATGCCGTGCTCGTCCAACGCGCCCGTCAGTTTTACCAACCAAGTTCAAAAGACAGAGGGCAAGAAGTCTATCTTGAAAACGATTTCTATAGAAGAAATCAAGGGGAAAGAAGAGGTGGCGGGGTTTGAGGTGGAGCACACGGAGGACGCCGCGCAGTTCCCGACTCCGGTGAAGTCCAACACGGCGGAAGTCATTCACGTGAAGGAAGAGTTCAGTTCGAGCAACGAGGGGACATTCAGTAACCAGGAGCAGCCCGAAATGACGTCTCTAGACCCGTTGCGGCCCTCGATAAACGTCGTCAGCTACGAGAACATGTCTCCGAGAGATTTCGACGAGGAGTCGAGTCATCGGGAGCTGCTGGACTTGGAGGGAGCGAATAAGACCAAGCAGTTCGTTAACATGATGAACGAAAACTATTTCGGGGATAATATTTACGAGCACTATTTCACGCCGGATCGAGTAGAGGCGTTCGACGATAAAGGGCCGACGGCGTTCAAAGATAATGCTAAAGAAGCGTTCTCGTGTAACATTTGGGGGGAGCCGTCTACGAAAGAGAACGAGTTCGTGCTGCCGAATTTTATTCACGAGAGTTATAAGATCGCTGAGAGCGGGATGGATTACGTGGAGGGGGAAAGGGACGAAGCGCCCGGGGATGAGGAGAGGGAGCAGGAGAGCAAGGCGGATTTGCTGAGCGAGAGTCGCAGTGATGGGGAGCCAACGCTTAATATTTGCGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGCCAAGAGAGCAACGGAGACATGGACTCCTCTTGGAACGGGGCGTATTCGGAGGCGACGCCAGCGGAGCCCTACGACCTGATGGCGCGCGAGAGCTGGGTCTCGGATGGCTCGGAACTCGACGTCACAGACAAACGGGACAACCTGGAGGAGATGGCGGTATTCCCCGCGTCGCGACAGTACGCGTGCGTGTCTTGCGGCGGGGCTTTCCCTTCGCTGAAGGAACTGCGAGCCCACGCGGCCTTGGCGCATCCTCCTGCCGCTTCGTACTCGAGGATAACCACCACCATCAAGAAGGAAGAAAAGACTGAAGACAATGGCCTGTCTTGTGCCACGAGCCTCATGGCGCTGGACTCCAAAGAAACCATCACTTCGACCATCCTGCAAGTGTACGACTCGCTGGAGGAGAGCAAGCCGGGCTTGGAGCTACGTGGGCTGCTGAAGCAGGAGACCAAACGCAAGCGGCGGGACTTCGTGTGTCCCACTTGTAAGGTGGACCAGGTGACAGAGGCGGCGTTCAACGCGCACCTGCGCACGCACCCGCTGGAGTGCCTGAAGTGCGGCAAGTGCTTCCACCGGCGCGCCAACCTCAACCTGCACCTCAAGACGCACCTCGGCATCAAGAACTACAAGTGTGAGATCTGCGAGAAGCGGTTCCTGACGCGGCAGAAGCTGTCGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACCCTCTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGAATCGCCACCACTACCAGAAGCGCGCCGCGGTCCGCGACTACGTGTGCCAGTGCGGGCTGGTGCTGCACTCGCGCGCCAAGCTCGCGTGGCACCGCGAGACGCACGAGCCGCGCCCCAAGGCCTGCATGCACTGCCCCGACAAGTTCCTGCACGCGGCCTCGCTCACCCGCCACATACGGCGCAAGCACAACGCGCTCTACATGACCGCGCCCTCGGTCTCGCGCGCCGACAATGTTCCTTGTCCTATTTGTAAACAGATTTACCTCCGGACGAACCTGCGCGCACATCTCCAAACCCACAGCGGCAAGCGTCCGTACTCCTGCGTCGTCTGCAACAAATCCTTCACCACCAAATGGAACCTCAAACTCCACCGCTGGACACACGTGTCCCGCTCCGCCAAACCTTTCAAATGCGCCCTCTGTAAAGGCGCCTTCATCCGACGAACCGAATACATCTCCCACATGAACTCACACAAATCCGTCCGCCCGTACACGTGTAACTACTGCGGCTGTCAGTTCATCCGCAAATACAACTGCCAGCGACACGTGAAAGAACACGAAACGGCGAAGAAGTACGTATGCGAGGTTCCGGAGTGCGGTAAGTCGTTCCATAGGAGTTATTACCTGTCGGAGCATATGAAGGTTCACAGCGGCGCGAGGCCGTTTTCCTGCAACATCTGCGGCAAGACGTCCAGCAATAAGAGTAATCACAATAAACATGTGAAGATACATCACGCGAGGGAGCCCGTCGCTACTGAGGCGTAG
Protein Sequence: MDSLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCSIANKNNSCASSRTSTPANSERSYRSRSQTPAPDDNGRWNGVHRNPDHDRYWARTPSGGSSRAPSRTPSRTPSRNQSRTPRSTSSTNISRNCTPDIRMVDNLTYETTTVSSSSQHSNHSHSNLINPPLSMKADKMQQTYPPPISDYEQKYLFYPEQQEDREIKYSRSAEYNAIDVNNVFSYNVPTGTPGVKLQPNMPHVMRKRSEPVKVQIQKPGNILSLVKNNIGGMQYLAQGVKPMHVVVSPSAPSFVQKNVQNSMMVSGALPTSQVHRDSKTAPPLVQNHFNQLSSSSFTPGTTVVTQNSQYFYQEMVQNIDPKSFIPSMPTVFTGQENVANVAQASSIYQNVMLVDQFGNTSCMYTTPQQMVPKQSASQMFTDASVLIPNTQKQGPPVTDQNKTLVIEVSPIIPTTRISSCNSTASKVLSRPPRQTSAIVSNFTLPKAEAPNVTITEKIDTPSEAPGTTRGLKILSNIKVEVPVQHNKNMINTVMDLTGPSDREYPVRSASPEKILPDIDNLEQKSSQAYSEPSTSRGDSSRDSSHSFPELEKITSPTSNKDSSKTDSVDNKIDMEFSDSCPVPDLICNEKPSISPISELSESGDNSTDRSAISPKPETSKISNELDSKEKKNQLPMKPFRSTPLRLNNIFVKKSKKILQIKNLKTVSDDGPSRQEDEPMPCSSNAPVSFTNQVQKTEGKKSILKTISIEEIKGKEEVAGFEVEHTEDAAQFPTPVKSNTAEVIHVKEEFSSSNEGTFSNQEQPEMTSLDPLRPSINVVSYENMSPRDFDEESSHRELLDLEGANKTKQFVNMMNENYFGDNIYEHYFTPDRVEAFDDKGPTAFKDNAKEAFSCNIWGEPSTKENEFVLPNFIHESYKIAESGMDYVEGERDEAPGDEEREQESKADLLSESRSDGEPTLNICADERMPPRGELSGQESNGDMDSSWNGAYSEATPAEPYDLMARESWVSDGSELDVTDKRDNLEEMAVFPASRQYACVSCGGAFPSLKELRAHAALAHPPAASYSRITTTIKKEEKTEDNGLSCATSLMALDSKETITSTILQVYDSLEESKPGLELRGLLKQETKRKRRDFVCPTCKVDQVTEAAFNAHLRTHPLECLKCGKCFHRRANLNLHLKTHLGIKNYKCEICEKRFLTRQKLSEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRNRHHYQKRAAVRDYVCQCGLVLHSRAKLAWHRETHEPRPKACMHCPDKFLHAASLTRHIRRKHNALYMTAPSVSRADNVPCPICKQIYLRTNLRAHLQTHSGKRPYSCVVCNKSFTTKWNLKLHRWTHVSRSAKPFKCALCKGAFIRRTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVKEHETAKKYVCEVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143318;
90% Identity: iTF_00827355;
80% Identity: -