Basic Information

Insect: Hypomecis atomaria
Gene Symbol: -
Assembly: GCA_964007245.1
Location: OZ023282.1:20701028-20714226[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.019 1.7 10.4 1.4 2 23 207 229 206 229 0.93

2 29 0.0016 0.15 13.8 1.0 2 21 264 283 263 284 0.93

3 29 0.00014 0.013 17.1 0.4 2 23 321 343 321 343 0.97

4 29 0.00074 0.068 14.8 0.6 1 23 407 430 407 430 0.96

5 29 3.4 3.1e+02 3.3 0.2 1 23 446 468 446 468 0.93

6 29 0.0021 0.19 13.4 1.7 2 23 510 531 509 531 0.95

7 29 0.0077 0.71 11.6 3.1 2 23 572 594 571 594 0.96

8 29 8.3e-06 0.00076 21.0 1.3 1 23 644 667 644 667 0.97

9 29 0.0018 0.17 13.6 0.2 1 23 724 746 724 746 0.97

10 29 0.018 1.7 10.5 6.5 2 23 758 779 757 779 0.96

11 29 0.058 5.2 8.9 1.0 2 23 791 812 790 812 0.95

12 29 0.0081 0.74 11.6 1.1 1 23 822 844 822 844 0.98

13 29 0.37 34 6.3 4.6 2 23 873 894 872 894 0.95

14 29 0.00028 0.026 16.2 3.2 1 23 905 927 905 927 0.97

15 29 6.9e-06 0.00062 21.2 0.7 1 23 935 957 935 957 0.99

16 29 0.0011 0.1 14.2 0.7 2 23 977 999 976 999 0.97

17 29 0.094 8.6 8.2 0.4 1 23 1017 1039 1017 1039 0.97

18 29 0.95 87 5.0 2.9 1 23 1046 1068 1046 1068 0.94

19 29 0.23 21 7.0 0.9 2 23 1079 1101 1078 1101 0.90

20 29 0.028 2.5 9.9 0.2 1 23 1123 1145 1123 1145 0.97

21 29 4.2 3.8e+02 3.0 2.6 2 23 1188 1210 1187 1210 0.94

22 29 1.1 1e+02 4.8 0.1 2 23 1226 1247 1225 1247 0.92

23 29 0.24 21 7.0 2.4 3 23 1255 1275 1253 1275 0.95

24 29 0.058 5.3 8.9 1.1 2 23 1286 1308 1285 1308 0.94

25 29 0.26 24 6.8 0.4 2 21 1325 1341 1325 1343 0.73

26 29 6.1 5.6e+02 2.5 2.2 2 20 1347 1365 1346 1367 0.92

27 29 0.62 57 5.6 1.9 2 23 1415 1436 1414 1436 0.93

28 29 0.036 3.3 9.5 0.4 2 23 1447 1469 1446 1469 0.95

29 29 2.6 2.3e+02 3.7 1.1 2 20 1507 1525 1507 1527 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.019	1.7	10.4	1.4	2	23	207	229	206	229	0.93
2	29	0.0016	0.15	13.8	1.0	2	21	264	283	263	284	0.93
3	29	0.00014	0.013	17.1	0.4	2	23	321	343	321	343	0.97
4	29	0.00074	0.068	14.8	0.6	1	23	407	430	407	430	0.96
5	29	3.4	3.1e+02	3.3	0.2	1	23	446	468	446	468	0.93
6	29	0.0021	0.19	13.4	1.7	2	23	510	531	509	531	0.95
7	29	0.0077	0.71	11.6	3.1	2	23	572	594	571	594	0.96
8	29	8.3e-06	0.00076	21.0	1.3	1	23	644	667	644	667	0.97
9	29	0.0018	0.17	13.6	0.2	1	23	724	746	724	746	0.97
10	29	0.018	1.7	10.5	6.5	2	23	758	779	757	779	0.96
11	29	0.058	5.2	8.9	1.0	2	23	791	812	790	812	0.95
12	29	0.0081	0.74	11.6	1.1	1	23	822	844	822	844	0.98
13	29	0.37	34	6.3	4.6	2	23	873	894	872	894	0.95
14	29	0.00028	0.026	16.2	3.2	1	23	905	927	905	927	0.97
15	29	6.9e-06	0.00062	21.2	0.7	1	23	935	957	935	957	0.99
16	29	0.0011	0.1	14.2	0.7	2	23	977	999	976	999	0.97
17	29	0.094	8.6	8.2	0.4	1	23	1017	1039	1017	1039	0.97
18	29	0.95	87	5.0	2.9	1	23	1046	1068	1046	1068	0.94
19	29	0.23	21	7.0	0.9	2	23	1079	1101	1078	1101	0.90
20	29	0.028	2.5	9.9	0.2	1	23	1123	1145	1123	1145	0.97
21	29	4.2	3.8e+02	3.0	2.6	2	23	1188	1210	1187	1210	0.94
22	29	1.1	1e+02	4.8	0.1	2	23	1226	1247	1225	1247	0.92
23	29	0.24	21	7.0	2.4	3	23	1255	1275	1253	1275	0.95
24	29	0.058	5.3	8.9	1.1	2	23	1286	1308	1285	1308	0.94
25	29	0.26	24	6.8	0.4	2	21	1325	1341	1325	1343	0.73
26	29	6.1	5.6e+02	2.5	2.2	2	20	1347	1365	1346	1367	0.92
27	29	0.62	57	5.6	1.9	2	23	1415	1436	1414	1436	0.93
28	29	0.036	3.3	9.5	0.4	2	23	1447	1469	1446	1469	0.95
29	29	2.6	2.3e+02	3.7	1.1	2	20	1507	1525	1507	1527	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTCGGAAAATGCAGATTGTGTCTCAAGCTTGGGGATTTCTACTCCATATTTACGGTCGACAATGCCGTACAACTCGCGGAGATGGTTATGGATTGTGCGaggataaaaGTATATGAAGGAGATGGTTTACCAGATAAAGTGTGTGCCGAGTGCATACAAAAGCTCAGCAGTGCGTACATCTTCAAACAACAGTGCGAGAGAGCCGACCAGGAGCTACGAAGGAACTATGTCCCACCACCAGGCTTCAGTATCAGTCCACCACCTCCAAACAGGCAGAGTAGCGACTCGGCGTTCTCAACACACACGGACAGCTCTAACTTAAAGTCTTCCTTCATTGAAAGCAAAGTATCTCCAGTCAAAAGAAATAGAAAGAGGAGCATCGAAAGCGACAATGCATCCGAAGCGAGCCGGTCGCAGGACTACGGCCGGCCCAGCAGCTCCAAACGCGTGGAACAACTCCGGCGAACGCAGAAGAGACCACGAATCTCCGCCAACGACTCTAACAACTCCCAGTGCGATTCCGATTATGAAGACAATGGAGGATCCAGCTACGTCCCCGAGACGGACAACGATTCCGACGAACCGCTCATCAAACCTAACGAAATAAAATGCGAAGTGTGCAGCAAGACGTTCAAGTGGAAAAAGAGTTTAAAGTACCACTTGACAAATGTCCACGGGAAGAAAGATAGCTTTGATGCGATCGTCGCCAACTCCGCCCCTGCGGTGAGCACTCCCAAACAAACCGCCGACTCCTCGTTCGAAGATGACGAAAAACAAACTTGCACCCGATGCGACAAAACCTTCAAACTGAAAATCATGTTAAAGAGGCATCTGGAAACGTGCACGGGAAAGACACCCGCGAAGAATCCCATAATATCGCCGCAAAAAGAGCTGTTCATATCTTTGGAACCGATCGACGCCATACACAAGATCACGGTCAAGAAACCTACCTGCGAGTACTGCACGGCTAAATTCAAAACTGTCGAAAATCTAGAGAAACATCTCAGAATTGTGCATGCGGCTGTCTTGAAGAAAGAGATCGACGCGAAAGAGAAGGCGAAAGTCAGTCCGAAGCAGAGTCTAAAATTCAAGGAAGGCTCGAACGTGTTCACCATTCCTTGCATCTACTGTCAGAAGCCATTCGATGACTACTATGTCCACCAGTCTCACTTCTCTACATGCCCAAAGAAGGATTCGCGCTATGTTTTCGAATGCCCGATCTGTAAAAAGGTATCGAGCCGTAAAAATGGCTACTTTATCCATCTGAAGAATATACATTTTGAGCCCCGAGCGACCAAGTCCGAGGACCCTTCGGAAACTTCTTTTGATTGTCGCATCTGTAGCAAGAAACTGCTCTCTCAGGAGATGCTCGTGACGCACCTGGCAGCTCACGCATCGAATATAGAAGATGATAACGATGACACCACTCATGACGATGGCGACTCgagACCCAGCATGTTTGAAGACTCCGCGTCCATGCACTCCGCTCCTGGCTCTACGCCAGGAGGGATACTAAAATGTCGCACTTGCGATAAAGAATTCAAGTACCGCAAATCGCTTATCTCGCACGAAGCAAAACATACTGAAGACGAGATGAGAGTGAAAAATGAACCACCAGACAAATCATCGATGAGCTTACTAAGCGAGGCCCCACGCGACTCGGATTTTGAATCTAGTCAAGACGATGAAGACACGGACCTTACTTGTGATATATGCGAGAAAATGTTCTCCTACAAGCGGATACTCGAGCACCACAAAAGAACAAAGCATAACATGTCTTCGGGCACTAAACGGGCGAAAATAAACCTTAAAGACTGTACTGTAAGGTGTTTGCTTTGCGATTTGGAGATGAAAGTGAGCGCTATCAATGAGCACAATCAGAAGCATATTTCAGTAAACATCAAGCCGAGGAATATCTACACTTGTGCCGAGTGCGGGCAGAAGTTCAAGAGTTGCAGTAATTTGGCGAATCATATTAAGCTAGTACACAGGTTGAAACAGACACAAGAGCAAGTGCCGCGGCAGTTCATCGGCGCGGATCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACCAAATCCAGAGTCACAACGGCTTTGGCGAGGTTCCGTCTCAGGCGGCTATGACAGTGGACCTCAGCGGGTTCACGTGTCCCACCTGCGGCAAGAAGATGCCCACTCTCATCTCTCTGAAGCGTCACGTCAACTGGCACTCCTACGTCGGCGCCAACCTGGAGAAGAAACTCGAGTGCTTCGTTTGTAAAGAGACATTCAAGTTCCAATGTCACTTCAAGCTCCACATGCGCGAGCACTACCACGACACCAACATCGACCCCGCGCACCTCACCTGCTCCATCTGCGGCAAGAAGAGCAAGCACCTCCGCGCCGCGCAGATGCACCTCAACTGGCACAAGCAGACCCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCAAACGCGTCTTCCAATTCCGGAAGGTCTACCTCACGCACATGGCCGTGCACTACAAGAAAGGAGAGAGCGCCATGAACACCGTCATCGGAGATATCCACTGGGGAGAGGGAAAAGGACCCCTCGACGCCACGTCTACCTGCCATCTCTGCGGGAAAGTCTGCCTCTCTGAAACTTCTCTGAAGCACCACCTCATCTGGCATAAATCGAAGACCTTACTCTACGGATCGAGGCACGAGTGTCAAATTTGCCAGCTCCAGTTCACCAACAAGCGGCATTTAGAACTGCACATCCGAGCGCACTACGAAGACGAGAACGGACCATACAAGTGCAACATATGCGGGAAGGGATACACGGACGAGGATTACATGCGGCGGCACGTTAAGAGTCACAACTTCGATCACTCCTCCCACAAGAAGCGGATCGAGAGGCTGAGGAAAGATAAGGTGAAGTGCCCGATTTGTTCGCGGTACTACCCCGACTTGCTGCATCTGATTCGGCATTTGCGGCGCACGCATCCCGAGTCCAAAATGATAAAAGATGATCCCGACGCGCCGCCGCCTTCCTACTTCTCCTGCAAGCTCTGCGCTAAAGTATTCCTGACTGCGGCGCGCCTCAAGAAGCACGAAGAGATGCATTTGCGGAAGCCGAATTTCTTCCGGTGCAAGTTCTGCGGAAAGAAGACGATCTCGCTAAAGATGCACAATATACACATCAAGGGGCATCTGACGAGGAAGCACGTGGAAAATCCGCTGAAATGTCCGCAGTGCGACGAGAAGTTCGTATGGGGATACGCGTTGCACCATCACTTGCGAGACGTACACGGGGTTAACGAGACGTGGATCGCGGAGCGCGCCGATGTCCCGCTCGAAGGACCATTGAAAGAGTTCCAGTGCGCCGTTTGTATGAAAGTCCTCGCGAGTAAAGGGAACTTCGAACGGCACCTCGACTACCACAACTCCCTGCGCTGCAACTACTGCTTTGATTATTTCGGTGGGCTGCGCTTTTTGGAGGGACATCTGGCGTTCAGCTGCGACAAGAAAAAGTTGGTCGGCGATACGGAGGTGCATCAACGGCGGATCAAGTGCGAAGTCTGCTATAAAGCGTTCCATCTGCAGGTGAAGCTGGACTGCCACCTGCGCACGGCGCACGGCGTGGTGGTGGAGCGGCGCGCGGCCGCGGCCTCCGCCGAGACCGTGTGCGACTTCTGCTTCCGCGCCTTCGAGAACGAGTTCGCGCTCGCCGGACACAAGGCCTACCACCGCTCCGTCGGCTACTTCGGGTGCCGCTACTGCGCGCGCAAGTTCAACACGCGCCAGGCCTACAACCGACACAAGACCCAGCACCTCTACACGCTGAACACCGACGACCCCACCAAGTGCGACCACTGCGACCAGCGCTTCGTCGCCTTCCGAGACATGATCGAACACATGAAGGACGACCACGGCGACGACGCCGAGTGGATCATCGAACCCAAAGAATCCATCGAAGAAAAGTGCCCGATATGCGACAAAATATTCTACAACCTCCCGCGCCACCTCCAATACCACGAAGAAAACAAGTGCAAAAAGTGCAGCGAATACTTCTACTCGCGACTCGATTTCGATAACCACCTGTGCGCCATCGAGAGCGACGCCGAGGAGGCGGCCGGCGGAGACGCGCCCGCGCGCGCCTACGAGGAGTGCACCTTCTGCTTCAAGCCCATCACGAAGAAAGATTCCAAGAAAAAACACGACATCCTGCACCGAACCTCGGGGGCCATCTCGTGTCGCTTCTGCCACCTCAAGTTCAAGACGATCGACGCGTTCAACATTCACGCGTTCTCTCACCGCAGCCGCAAGTACGTGCAGCGGCCGATCAAGTGCCGCGTCTGCAAGGAGCGCTTCATCAAATACGGACCCTTCATGAAACACATGAAGGCGGCGCACAAGTCGGCGAAGAAGTTGCACTACCGGGCCACGGTGAAGGCGGAGCGCTGCGTCGTTTGCGGGGAATGCTTGCCCAACTTGCACAACCACTACCGCGCGCACCTCGTCAACCGCTGCCTGCAGTGCGCGAAGTACTTCGCGTCGTCGCGGCTGTTCGCTCGACACGAGTGCGACAAAGAAGACGCAGATCCGAGCAAAGTTTTCACGTCGGACGCGGACCTGCCCGCGCTCATAGCCTCCTACGTTCCTAAAGACGAGAAGGACGACGAGAAGTTCTACGGGTACACGGATGACGAGGAAGACCCGGAGCCGGCACCGGCGGAATTCCCGACGCAATCGAAGCCGAAAGTCGTCAAGACTTATTCTAAGGCGAAGGCGGCGAAGCGGCCTCAGATAAACGAACTGCCGCGGCCTCAGCCGGTACCGAGCCAACCGATAGACACGCAGCTGGCGGAAGACGAGCGCAACCTGCACATGATGGTTGTATCTCCGATCATCTCTGACGTGCTCTCGCTCTATGAGAAGAAGGAGATCGACGGGGACTCGAAGAGCCAGTCGAGTCAGTTCGACGACGTCGTCCAACTCAGCGACGACTCGATGGACGCGACCGACGTGCGCGCGCCCGTTATCGTCATTGACGACGATTCTAGTTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARIKVYEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNLKSSFIESKVSPVKRNRKRSIESDNASEASRSQDYGRPSSSKRVEQLRRTQKRPRISANDSNNSQCDSDYEDNGGSSYVPETDNDSDEPLIKPNEIKCEVCSKTFKWKKSLKYHLTNVHGKKDSFDAIVANSAPAVSTPKQTADSSFEDDEKQTCTRCDKTFKLKIMLKRHLETCTGKTPAKNPIISPQKELFISLEPIDAIHKITVKKPTCEYCTAKFKTVENLEKHLRIVHAAVLKKEIDAKEKAKVSPKQSLKFKEGSNVFTIPCIYCQKPFDDYYVHQSHFSTCPKKDSRYVFECPICKKVSSRKNGYFIHLKNIHFEPRATKSEDPSETSFDCRICSKKLLSQEMLVTHLAAHASNIEDDNDDTTHDDGDSRPSMFEDSASMHSAPGSTPGGILKCRTCDKEFKYRKSLISHEAKHTEDEMRVKNEPPDKSSMSLLSEAPRDSDFESSQDDEDTDLTCDICEKMFSYKRILEHHKRTKHNMSSGTKRAKINLKDCTVRCLLCDLEMKVSAINEHNQKHISVNIKPRNIYTCAECGQKFKSCSNLANHIKLVHRLKQTQEQVPRQFIGADLADFCEVVVTKAEPLDQIQSHNGFGEVPSQAAMTVDLSGFTCPTCGKKMPTLISLKRHVNWHSYVGANLEKKLECFVCKETFKFQCHFKLHMREHYHDTNIDPAHLTCSICGKKSKHLRAAQMHLNWHKQTRFQNKDYQCSICKRVFQFRKVYLTHMAVHYKKGESAMNTVIGDIHWGEGKGPLDATSTCHLCGKVCLSETSLKHHLIWHKSKTLLYGSRHECQICQLQFTNKRHLELHIRAHYEDENGPYKCNICGKGYTDEDYMRRHVKSHNFDHSSHKKRIERLRKDKVKCPICSRYYPDLLHLIRHLRRTHPESKMIKDDPDAPPPSYFSCKLCAKVFLTAARLKKHEEMHLRKPNFFRCKFCGKKTISLKMHNIHIKGHLTRKHVENPLKCPQCDEKFVWGYALHHHLRDVHGVNETWIAERADVPLEGPLKEFQCAVCMKVLASKGNFERHLDYHNSLRCNYCFDYFGGLRFLEGHLAFSCDKKKLVGDTEVHQRRIKCEVCYKAFHLQVKLDCHLRTAHGVVVERRAAAASAETVCDFCFRAFENEFALAGHKAYHRSVGYFGCRYCARKFNTRQAYNRHKTQHLYTLNTDDPTKCDHCDQRFVAFRDMIEHMKDDHGDDAEWIIEPKESIEEKCPICDKIFYNLPRHLQYHEENKCKKCSEYFYSRLDFDNHLCAIESDAEEAAGGDAPARAYEECTFCFKPITKKDSKKKHDILHRTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVQRPIKCRVCKERFIKYGPFMKHMKAAHKSAKKLHYRATVKAERCVVCGECLPNLHNHYRAHLVNRCLQCAKYFASSRLFARHECDKEDADPSKVFTSDADLPALIASYVPKDEKDDEKFYGYTDDEEDPEPAPAEFPTQSKPKVVKTYSKAKAAKRPQINELPRPQPVPSQPIDTQLAEDERNLHMMVVSPIISDVLSLYEKKEIDGDSKSQSSQFDDVVQLSDDSMDATDVRAPVIVIDDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634735;
90% Identity: iTF_00827261;
80% Identity: -