Hato037830.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- ZNF296
- Assembly
- GCA_964007245.1
- Location
- OZ023310.1:10560348-10598513[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.13 12 7.8 0.1 3 23 122 142 120 142 0.97 2 14 0.00011 0.01 17.4 1.5 1 23 417 439 417 439 0.99 3 14 9.6e-05 0.0088 17.6 1.7 1 23 445 468 445 468 0.98 4 14 0.0084 0.77 11.5 4.0 1 23 473 496 473 496 0.93 5 14 2.9e-06 0.00026 22.4 0.7 2 23 687 708 686 708 0.97 6 14 0.0072 0.66 11.7 0.2 1 23 714 736 714 736 0.93 7 14 0.0002 0.018 16.7 2.5 2 23 809 830 808 830 0.97 8 14 0.00068 0.062 15.0 1.9 1 23 836 858 836 858 0.98 9 14 5.1 4.6e+02 2.8 0.6 1 13 982 994 982 1003 0.71 10 14 0.044 4 9.3 5.1 1 23 1012 1034 1012 1034 0.99 11 14 0.0005 0.046 15.4 1.0 3 23 1095 1115 1094 1115 0.98 12 14 0.0045 0.41 12.4 3.8 1 23 1132 1154 1132 1154 0.96 13 14 3.6e-06 0.00032 22.1 0.8 1 23 1160 1182 1160 1182 0.98 14 14 1e-06 9.1e-05 23.9 3.1 1 23 1188 1211 1188 1211 0.98
Sequence Information
- Coding Sequence
- ATGAATAACGGAATGATGATGGATGTGGACCCCCTGAGTCCGTACGAAGCCCAGTACGAGTATCCTCACACAAATGCCAGCTACTTCCACCACCCCCCACTCCCCGCCCCGTACACTCAGCCTCATGACTATCCTCAAAACCCATACCAACTACCCCCACTAGATCAGGAAAATTACGAACCAAACGTCGAAAACACGACAATCGAAGAACCaaatcccacttctgaagtCGTCGAAGAAGAGGACATAAAACCTGACATCGTACAGCTGGAGACAGGGACGAAAccaaaaaagaaaactaaaggAAAGACAAGTAACTACTGGAATAAAAAGATTGTTGATAAAGATTTTGCTTTCTACGGTTGTTCGGTTTGCAATATAGCTTATACGGACTTACAAAAGTTAGATCAACATGTTTTAGTCCACTCTGACCGTTTAACAAGCTACGATCTAAGATTGATTAACTTACGTAAGCGCAAACTTCTTAAGAAAGCAAAGAAAAAGCTAAAAAAGCAAGCAAAAATCAAGCAGGAGTTTGAAATTGAGATCAAGCCCGAAGACGGGTACATTGGTACGGAAACGGCTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGTTTAATGAAACCGTCAAAAGTGATGACATTGGTACGAAAAAGACTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGTTTAATGAAACCGTCAAAAGTGATGACATTGGTACGAAAAAGACTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGTTTAATGAAACCGTCAAAAGTGATGACATTGGTACGAAAAAGACTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGACTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGCTTAATGAAACCGTGAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGTTTAATGAAACCGTCAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGCTTAATGAAACCGTGAAAAGTGATTACATTGGTACGGAAAAGGCTTTGGAGTTTAATGAAACCGTCAAGAGTGATATAAAGCCTGTGAAAAATAATGAGAATAATCCGCTGAATAAGAATGAAAGTAAGCAAAATCATGTGAACGTGTATAAATGTTTTGGTTGTAACAAGCAGTTTGCTTTGAGCTACTATTTGAGAATACATGTGAGGTCGCACACTGATGAAAAGCCCTACACTTGTGCTCAATGTGGTCAATGCTTCATAACCGCTAGCAAGCTGGGTCGACACACCAAACGAGTACACCTCGCGGTTAGACACCAATGCAGGATATGCTATAAGACATTTAGCAGATTCGAATTGCTTGTGAAACACTTTGACAGTAAACATCCTGATGACAAACTGGAAGGGGAACCTTATGACTACAACGCCATCTTGCCATACTTAAAAGAGCTAGAAGAGCAGCTAAAACAGGAAACCGAAAAGAAACCAAAGACAGAAGACCCGTGGGGTCTACCACCGGTCACGGGCGCTGCGGGTCTAACTATGGAAGTCGATGCCTTACTCACTGATGACCAAAAAACGGCCGACATGAGAGAAGAGATCTTTCTCACTAAACAGGAGGataaagtcGACCTACCCTCAAATTATGAATTTTACGACGAAAATAGAGAAATATCTGTAAATTATGAAATGAAAGAAGTCAAAGTCGATTTCGACATCAAAGCTGTTAAACAAGAAATAGATGATCAGGGTGATGATCATCATATCGATAATGATCACGATGATGATCACATTTTCAGTGATCATAATTTAGATGATCACGATCCTGGATTCCAGGCTAGTGGAGATGCTGTTAAAAATGaaaacgtAGGTACAGACGATGAGTACGTGCCATCCAGAACGTGGGTCCGCCCCCACTCTCCCCTGATAAAGAAACGGAAACGCAACGGGCCCACCACTTGTCCCATCTGCAACAAGGAAATCAGCAAGAAGAGCAATCTGCAAGTGCATATGAGAAGTCATACTGGTGAAAAGCCGTTTCCCTGTACGGTTTGCAAGCGCGGCTACAGTTCTGCTTTGGCTCTGAAACGGCATTCAGTTGTGCACGACAAACTTAAAGAAGaaaaagATGTAAAACCTAAAAAGGAACCCAAAACTGAAACTGATGAAACTACCACAGAGAAGCTGGAAGTTTCGTCGGATAATGAAAATGCCAAAGATGACCCAGGATCGGACGAAGAGTATTTCCCGTCAAAAACGTGGGCGCGCTCCCCCTCACCCCTCCCGGAACCTTCGGACACGCCGGCCCGCCGAAGCAAGACCACGTGCGAGATATGCAACAAGCAACTGTGCTCCAAGACATATCTCGCTGTGCATATGAGGACGCATACCGgagaGAAGCCGTTTTCGTGCTACATTTGCAATCGAGGATTTATAACGGCGAGCAAGATGCACCGACACGTGCTTACACACGACGAGTCTTGGGAAGGTAAAGATGGCATCAAACCGGAGGACGACGCCAAAGTTAAAGTGGAATCGGAGACGGAAGGAAAAGAAGATGGCGAAGAAAAACCTAATGAgGAATCAATGGAAAAAGCCAAGACTAGGCTGCTTTTGAAGAAATCCAAGAAAACTTTCTTCGAGAAAAAAGGGAAGGAATCCAAGAAATGGACGCATGTTTGCGAATTTTGTAATCAGAAATTCTTACACCTAGAAACTCTACAAGTACACAGAAAATGCCACAACGAGAGTGAAAACATGAAGTGTTACTACTGCTTAGAGGCCCACACCGAGCAGGAGGCCTTGAAGGCCCACGAGGCCTCCCATGTGGGGCCTAAACCCTATCTGTGCACGCTGTGCGGCCACCGGTACACGAAACGAGGGCCTATGCGCCACCTAGCGTCGCACTCGGTATCTCAGTATACCCTCCGTTACGAGTGTCCAGTTTGTGCGCACATGTTCCATACGAGATATCACGTCAGCATGCATCTTCGGTCGCACATCAAAGAGGGCCTgATTCTAGAAGAAAACAGAAGTTCAGTGCTAGCGATGGTTTTGCAGAACGCCCGAAAGATACCGAAAAGTACAGATATCGCCAATATCGCCGCGTCTACCGCTCTGGCTTCTACTGCTCTGCCCACCCCTGTCTTGGATCCCGGCGCGGATGAGAGGTCTCGGATATGTAATATTTGCGGtcaaatattccaacatttctACTATTTGGAGGAGCATCTGAAAACACACGGGACCAAGATGGCGCTCGAAGATTTGGACGAAGAGGAAGAGAAGAAACACACTTGCCAGGTCTGCTCAAAATCGTTCAAGCTGCCCTACTATCTGAAACTCCACAGCTACACACATACAAAAGAAAAACCTTTCATCTGCCAAACTTGTGGTAAAGGTTTCATCACAAAAGGAAAACTAAAAAGGCATCTAGAAACCCACCAAGGCTTGAAAAAGTACCAATGTCACATCTGCTATAAGTTTTTCACTAGGCCAAGTTATTTAAGAATACATGTGAGGACTATACATGGAACTCAGGATTATAATTTTAGGGACTATGGCATTGGAGTGCCTATAGGCGCGTTGACTCATGAATGA
- Protein Sequence
- MNNGMMMDVDPLSPYEAQYEYPHTNASYFHHPPLPAPYTQPHDYPQNPYQLPPLDQENYEPNVENTTIEEPNPTSEVVEEEDIKPDIVQLETGTKPKKKTKGKTSNYWNKKIVDKDFAFYGCSVCNIAYTDLQKLDQHVLVHSDRLTSYDLRLINLRKRKLLKKAKKKLKKQAKIKQEFEIEIKPEDGYIGTETALEFNETVKSDYIGTEKALEFNETVKSDDIGTKKTLEFNETVKSDYIGTEKALEFNETVKSDDIGTKKTLEFNETVKSDYIGTEKALEFNETVKSDDIGTKKTLEFNETVKSDYIGTEKTLEFNETVKSDYIGTEKALELNETVKSDYIGTEKALEFNETVKSDYIGTEKALELNETVKSDYIGTEKALEFNETVKSDIKPVKNNENNPLNKNESKQNHVNVYKCFGCNKQFALSYYLRIHVRSHTDEKPYTCAQCGQCFITASKLGRHTKRVHLAVRHQCRICYKTFSRFELLVKHFDSKHPDDKLEGEPYDYNAILPYLKELEEQLKQETEKKPKTEDPWGLPPVTGAAGLTMEVDALLTDDQKTADMREEIFLTKQEDKVDLPSNYEFYDENREISVNYEMKEVKVDFDIKAVKQEIDDQGDDHHIDNDHDDDHIFSDHNLDDHDPGFQASGDAVKNENVGTDDEYVPSRTWVRPHSPLIKKRKRNGPTTCPICNKEISKKSNLQVHMRSHTGEKPFPCTVCKRGYSSALALKRHSVVHDKLKEEKDVKPKKEPKTETDETTTEKLEVSSDNENAKDDPGSDEEYFPSKTWARSPSPLPEPSDTPARRSKTTCEICNKQLCSKTYLAVHMRTHTGEKPFSCYICNRGFITASKMHRHVLTHDESWEGKDGIKPEDDAKVKVESETEGKEDGEEKPNEESMEKAKTRLLLKKSKKTFFEKKGKESKKWTHVCEFCNQKFLHLETLQVHRKCHNESENMKCYYCLEAHTEQEALKAHEASHVGPKPYLCTLCGHRYTKRGPMRHLASHSVSQYTLRYECPVCAHMFHTRYHVSMHLRSHIKEGLILEENRSSVLAMVLQNARKIPKSTDIANIAASTALASTALPTPVLDPGADERSRICNICGQIFQHFYYLEEHLKTHGTKMALEDLDEEEEKKHTCQVCSKSFKLPYYLKLHSYTHTKEKPFICQTCGKGFITKGKLKRHLETHQGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRDYGIGVPIGALTHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -