Hato016763.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- Morf4l1_1
- Assembly
- GCA_964007245.1
- Location
- OZ023290.1:20062344-20076345[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0022 0.2 13.4 6.3 1 23 112 134 112 134 0.99 2 19 0.0014 0.13 13.9 0.2 1 23 200 222 200 222 0.90 3 19 2.8 2.6e+02 3.6 0.3 5 23 230 249 227 249 0.94 4 19 0.2 18 7.2 0.1 1 23 342 365 342 365 0.90 5 19 0.0058 0.53 12.0 0.8 1 23 374 396 374 396 0.98 6 19 0.0034 0.31 12.8 0.3 1 23 402 424 402 424 0.98 7 19 0.00021 0.019 16.5 4.7 1 23 430 452 430 452 0.97 8 19 2.8e-07 2.5e-05 25.6 0.2 1 23 458 480 458 480 0.98 9 19 3.3e-06 0.0003 22.2 3.2 1 23 486 509 486 509 0.98 10 19 2.5e-05 0.0023 19.5 1.0 2 23 515 537 514 537 0.96 11 19 0.0002 0.018 16.6 2.6 1 23 547 570 547 570 0.97 12 19 4.9e-05 0.0045 18.5 0.0 2 23 578 600 577 600 0.93 13 19 0.0037 0.33 12.7 0.9 1 23 606 628 606 628 0.98 14 19 0.1 9.2 8.1 0.3 1 23 636 659 636 659 0.96 15 19 0.087 7.9 8.3 0.5 3 19 664 680 662 682 0.92 16 19 0.00014 0.012 17.1 0.2 3 23 688 709 688 709 0.96 17 19 0.00098 0.089 14.5 3.9 1 23 717 739 717 739 0.99 18 19 0.089 8.1 8.3 0.3 1 19 746 764 746 765 0.84 19 19 0.02 1.8 10.3 0.4 1 23 802 824 802 824 0.96
Sequence Information
- Coding Sequence
- ATGACTAAGTTTGCTGATGGTGAAATAGTGCTGTGTTTTTACGGCTCTGAACCTTACGAGGCAAAATGTCTCAAAAGCAAGACTACCGAAGATAATCAAACTCATTACTTTATACATTATGTTGGCTGGAAAAAAAGTTGGGACGAATGGGTTCCTGAAAGTCGTCTCTTCAAATACGACGATGCTGGTGTACGACGGCTAAAAGAATTAAGTCAGCAAAATGAACATCCAGCAAAGAGCAAACGAAAATCTGATTACAAATTGGAGGAGAGCAGCAAGAAAATTAAGTTGGATatGCAAAGTTGCTGCGTTCAATTAGAACAAGTAAAAGTATTTAGATGCTACTTTTGCAAAAGATGCTATCGAGATGATAAAGAGCTAAAAGCACATCGAAGAACGCATTTCGACTTTAGTAAAAGGAAAttgaaagataaaaataaaactaagcaaGATTGTACTGGTAACTCGAAGGAATTTTCTTCACCATCAAACCATGAGAATATGCTCAACCTGCAGTCAAATCATGTGAGTATGCAAATTAAAGGCTGGTTTTTCCAGGCAACTATCTTAAAACAAAGTAAGAAAACGGAGAAGCCTTTTAACTGCGAAACTTGTGGAACGGGATTCGTAAAGAGGAGTACTCTAGAAGCTCACTCCGTACTGCACAAGCCGTTTCCGAATATCTGCGAGTGCGGTATCGGATACTATAAAAAATGCGACCTTGACGCACACCGGAAACTGGTGCATCCAAATTACAAACCTCCCAAACCAGAACCCCTCGAAATCAAACTAGAAGATGAGCCAGATCACGAACCCGTCTATAATAAAGTAGGACCAAGACTAAAGGCCACGCTCACATTCAAATCGAAAAACAAAAGTCATAAACAAAAACATCGTACCAAAGATTATTCATACACAACCAAAAATCCCAAAAAATCCAAAACTCCCAAAGTAGATTTATCCAACAGGCGGAGGAAGCgaagtgaatttaaaatggAACTCGAACCCGACGAGAACGGCAATTATGCTTGTGCGTTATGTACTGAAGTCTTTTTCGAAAACGAAGAGTTATTATCGCACTATACGGACGCCCATTGTGAGAAGGTTGGGCATTCCCGTTTTAAGTGCCCCGTGTGTGGTAAAATATCTGCAGACGCACATAGACAGAAGAGCCATATCTTCACACATGTCGGCATTAAACCTTACCGTTGTAACATTTGCACGGGAAGGTACTCACAGGTGGGCGCACTCAAATTGCATTTACTGAGACATACAGGTGATAGACAGTTTCATTGTGAACATTGCAGTAAATCTTTTTATAATAGCGCCGATCTCAGGCTTCATTCCAGGATCCACACGGGTCAAAAACCTTTTGAATGCGGTCAGTGCGGGAAGAGCTTTAGCGACCCTTCGGCTTACAAACGTCACTTGTTAATACACACAGGTCTTAAACCGTATAAGTGTAAGCACTGCCCTAAAGCATTTTGTGACCCGGCGGCGCTGTTCAGACACAACCGCACCATTCACGAGGGCTACAACGTGCAATGCACAGAATGCAACAGGTCATTTACATCTAAAATGTCGTTGCTTTCGCACCGAAGACTCGCCCATGAAGACAAATTAAGAGATGACGAGAAATATCATTGCGAACAATGTAGTCACAAGTTTCCAACGAAGGCAAACTTAGCCATTCACATGAAAAATGTGCATATGCAAACCATCCCTGAATTAGAATGCGAAATCTGCAATAGAACGTACGCCAACGCTGGAAATCTGAAATTGCACATGGAAGGGGTGCATCTTAAAGTGAAGAGGTTTAAATGCGATATATGCGGTTTTGCGGTTCACATGAAAGGCAATTTGCTgcaacacaaaaaaattcacaaatCCAAAAAGGACAACGTTTTTATGTGTGACTATTGCCGCTTAGTGATGAAATCTAAGGCCCGATTGGAATGGCACATAACGCGCGTCCATTTCAAAATGGCGTGTGACGTGTGTACTAGAAGTTTCACTACATTTGCACGATTGCACCAACATAAAGCTGAAGGCTGCGGGTGGTGCAACATTTGTAAAAAGAATTTCTCAACACCTGAAGAATTGGAAGATCATAGAGCGGTCACTCACGCGAAAAATGATGGGAAAAAATATCGGTGCGAGTACTGTAGCAAAAGATTCGTTCTTGAGAGCAGTCTTCATTTGCACTATAATAAGCATATAGATCCTGCAGGGTCTTTCAGCTGCGACCACTGCGGCGAAGTGTTCCAATTGAAGTCGCGTATCGTGAACCATATCTGGGACAGGCACTTGGTAACTCTGTTCTGCAACATTTGCATGAGAAGGTTCTACTCGGAGCAAGACTTCCATTACCACAAACGCAAGGCTGCCTGTCACATGCGTAAATTCTCCTGTGATATATGCGACAGAAAGTTTCTTTTGGAGTCAAAACTGCGATCGCACCTAGTAGTTCACGGTGCTAAACATGGTAAAGTTGTAGTTACGATGTATGTTTGGTCTGCGGTATTGCGTTGCCGCGCCGCACCGGGCGCGCCGTTCGATACGCGCGCGCCGTGCGGCCCGCGCGGCATCGACCCCGTCTGGCCCCAGCCCCCAGTGCTCTCAGAACCCACCGACTGGCAGTAG
- Protein Sequence
- MTKFADGEIVLCFYGSEPYEAKCLKSKTTEDNQTHYFIHYVGWKKSWDEWVPESRLFKYDDAGVRRLKELSQQNEHPAKSKRKSDYKLEESSKKIKLDMQSCCVQLEQVKVFRCYFCKRCYRDDKELKAHRRTHFDFSKRKLKDKNKTKQDCTGNSKEFSSPSNHENMLNLQSNHVSMQIKGWFFQATILKQSKKTEKPFNCETCGTGFVKRSTLEAHSVLHKPFPNICECGIGYYKKCDLDAHRKLVHPNYKPPKPEPLEIKLEDEPDHEPVYNKVGPRLKATLTFKSKNKSHKQKHRTKDYSYTTKNPKKSKTPKVDLSNRRRKRSEFKMELEPDENGNYACALCTEVFFENEELLSHYTDAHCEKVGHSRFKCPVCGKISADAHRQKSHIFTHVGIKPYRCNICTGRYSQVGALKLHLLRHTGDRQFHCEHCSKSFYNSADLRLHSRIHTGQKPFECGQCGKSFSDPSAYKRHLLIHTGLKPYKCKHCPKAFCDPAALFRHNRTIHEGYNVQCTECNRSFTSKMSLLSHRRLAHEDKLRDDEKYHCEQCSHKFPTKANLAIHMKNVHMQTIPELECEICNRTYANAGNLKLHMEGVHLKVKRFKCDICGFAVHMKGNLLQHKKIHKSKKDNVFMCDYCRLVMKSKARLEWHITRVHFKMACDVCTRSFTTFARLHQHKAEGCGWCNICKKNFSTPEELEDHRAVTHAKNDGKKYRCEYCSKRFVLESSLHLHYNKHIDPAGSFSCDHCGEVFQLKSRIVNHIWDRHLVTLFCNICMRRFYSEQDFHYHKRKAACHMRKFSCDICDRKFLLESKLRSHLVVHGAKHGKVVVTMYVWSAVLRCRAAPGAPFDTRAPCGPRGIDPVWPQPPVLSEPTDWQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -