Hato035019.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- -
- Assembly
- GCA_964007245.1
- Location
- OZ023307.1:10626211-10628553[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.015 13 7.1 0.7 18 43 7 29 2 30 0.92 2 19 3.3 3e+03 -0.5 0.0 18 43 35 57 31 58 0.78 3 19 0.00036 0.32 12.2 0.1 18 43 66 88 62 89 0.93 4 19 0.00022 0.2 12.9 0.8 17 43 96 119 94 120 0.88 5 19 0.011 10 7.4 1.4 18 44 127 150 124 151 0.92 6 19 0.02 18 6.6 4.7 13 43 152 179 148 180 0.84 7 19 0.017 16 6.8 4.1 18 44 186 209 181 209 0.91 8 19 0.037 33 5.8 0.0 14 44 235 262 229 262 0.89 9 19 0.13 1.2e+02 4.1 0.2 9 43 283 314 279 315 0.82 10 19 0.37 3.4e+02 2.6 0.0 18 44 351 374 344 374 0.88 11 19 0.14 1.2e+02 4.0 3.3 13 43 393 420 387 421 0.85 12 19 0.72 6.6e+02 1.6 9.2 11 29 420 438 413 450 0.71 13 19 0.05 45 5.3 0.8 18 43 456 478 453 479 0.88 14 19 0.12 1.1e+02 4.1 0.8 17 44 484 508 480 508 0.85 15 19 4.2 3.8e+03 -0.8 0.9 18 28 515 525 513 537 0.83 16 19 6.4 5.9e+03 -1.4 0.1 35 43 559 567 550 568 0.86 17 19 2.4 2.2e+03 -0.0 0.5 14 29 571 586 564 597 0.80 18 19 0.00023 0.21 12.8 1.3 6 43 599 633 594 634 0.86 19 19 1.4 1.3e+03 0.7 0.3 13 29 649 665 644 678 0.83
Sequence Information
- Coding Sequence
- ATGTCTCAAGGCGATTTCGTTTGCGACTACTGCAGTCGCTCTTTTACAAGAAAATACAACCTACAGACTCATATAGAAAACTGTCATATAACATCATCAAGCTATTGCGACATATGCGATCAAAAATTTGGGAGCCCCAGTGGCTTACAATTACATCTCCTTCGGGGCCACAACAGATATGGCCAATCATTCCCGGAATGCGACATTTGTGGCAGAATCTTCACAAGGAAACAAAATATCATGTCTCATATGATCACCGTTCATCTACAAGGTATAGGGCCGGAGATCCGATGCCGAATTTGCGGCAAAACCTTTACAACAGAACGAAATTTGAAAAGACACGTGAAATTGCTACACAATCCAGATTTAGAGTATCCGACCTGTGATATTTGTAACAAGATTTTTAGAAGCAAACATTCACTCGTCTCCCATATACAAGCAGCTCATAATCACACTGATAGGGCAATCAAATGCCATATGTGTGATAAGGTGTTTACTAATAATAGAAATCTGAGAAGGCACATAGAGATGTTGCATGGGGAGAAAGAAGACCACAAATGCCATATTTGTCCTAAAAAGTACACTTCTAATCAAAGTCTGAAACGACATATCAAGACCACGCATTCTGATGAAGACAGTATTCAATTCGAGGTTAAAATAAGTTCTGATATGCAAAGCGAGGACTCCAGTGATTCCGACGAAAGCGACATGATCACTTGTGACACGTGCAACGAATCATTCGCGGAAGAGTCAATCTTACGTCAGCATGTAAAAAACGACCATCCATTCCAAGTCTTCTACGATTACTGCAAACGCTCTCTCGAAAAACTGGCCAATATATATCAGCCGACGTCGAGTAAACAGAACAACTTCAAATGCGAATTCTGCTCGTCAAGTTTTCGCAACGTTTACGAACTAAAAGAGCACATGAAAGTCAACCATGATACGGATTATAACTTGTGTAATTGCAACGTGTGTTTTTCCAAGTTTTTCTGCAAAGAGATTCTGGCTAAGCATAGGAAGGTCTGTATACCGCCCCGTGATGCCCACTCTTGTGACCACTGTGACAAACTGTTCACGGATATTTCGAGTTTGGAGTTCCATTTGAGGATATTCCATCCGCAAGCACAGTTAGCTGATCCTAACATAACTTCTACAAAACCTGACGAGGCTACGGACCTTAGTTCTTTCAAATGTGGTCATTGCGACAGGATGTACTACAGCGACCGCTCATTAAAGCACCACATAAAGTTAAAACATACGACAGATGAAGCAGTAGAATGTGGTTACtgcaataaaatatgtaacaacaaatattacCTTGCGTCTCATATCAAAATTGTCCACAGTGCTGTGGATTTATCGAAATGTGATTATTGCGATAAACTTTTCAAATCCAAACGGAATATACGACGCCACATCGAGTATACACACATGGGGATGCAACGATACAAGTGCATAGAATGCGAGACTCTTTTCAAAGAAAAGCGCAGTCTTCGCAAGCACGTTCGCTCAAAGCATCCGGACTCTACAATATTCCCCCAATGTCATATTTGTCGTAAAAGATTCGAATCGGCAAAATCCTGCAAGATACATTTGAAGCTCTTACATTCGTTCAACATGAACACTTATCCTTGCGACTTGTGTTCAGTGTCTTTCGGCTCACAAGAGGCTCTGAAGATTCACTTAGAAACTAAACATCTAGCTGAAGACGAGATTTACAAATGCGAAGAATGCAACGCAGTCTTCAAAGGATCTCTAAAATTTGAGGAGCACAACGAAATCGCTCACGCGTATGTAACTAATGCTGCGAAGCAGAAATTCTTGCCATATTGCGTGATTTGTATGAAAGATTTCAGCACGCGGAAAACTCTGAGACGGCACATAAAGAAATTTCACGAGGAATTCCATGCTGAAGATTTGGCAAACTTTGGCTGTCGCAACCGCGAGTTCAACGTTGAATGCGAAGACTGCTTGAAAAACATAAACAACGAATACTATGTAAACTTGTATAACAAAGTCAAGCATGTCAAGGATTCGATAGTATTCAAATGCGAGACTTGTAAGTCGTCCTTTAACTCTATCGAATTTGCAATTCAAAGGCATAAAATTTCAGCGGAGGATGATAAGTCGCATTTGATTTTGAGTGATCTGTGTACGACACAGATGAGCGACGACGAGGCCAGCTACACTGGATTTGGCTCTTTACACGAATACATGGAAGCGGAGAGTACCACTGCGGATATCAAAGAAGAACTAATAGAAACGAAGTATGAGGATATCAAAATGGAATTTGAGGAAATGGATTTGGTACAGGTCAAAATGGAACCTGTTTCTCCCTGA
- Protein Sequence
- MSQGDFVCDYCSRSFTRKYNLQTHIENCHITSSSYCDICDQKFGSPSGLQLHLLRGHNRYGQSFPECDICGRIFTRKQNIMSHMITVHLQGIGPEIRCRICGKTFTTERNLKRHVKLLHNPDLEYPTCDICNKIFRSKHSLVSHIQAAHNHTDRAIKCHMCDKVFTNNRNLRRHIEMLHGEKEDHKCHICPKKYTSNQSLKRHIKTTHSDEDSIQFEVKISSDMQSEDSSDSDESDMITCDTCNESFAEESILRQHVKNDHPFQVFYDYCKRSLEKLANIYQPTSSKQNNFKCEFCSSSFRNVYELKEHMKVNHDTDYNLCNCNVCFSKFFCKEILAKHRKVCIPPRDAHSCDHCDKLFTDISSLEFHLRIFHPQAQLADPNITSTKPDEATDLSSFKCGHCDRMYYSDRSLKHHIKLKHTTDEAVECGYCNKICNNKYYLASHIKIVHSAVDLSKCDYCDKLFKSKRNIRRHIEYTHMGMQRYKCIECETLFKEKRSLRKHVRSKHPDSTIFPQCHICRKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFGSQEALKIHLETKHLAEDEIYKCEECNAVFKGSLKFEEHNEIAHAYVTNAAKQKFLPYCVICMKDFSTRKTLRRHIKKFHEEFHAEDLANFGCRNREFNVECEDCLKNINNEYYVNLYNKVKHVKDSIVFKCETCKSSFNSIEFAIQRHKISAEDDKSHLILSDLCTTQMSDDEASYTGFGSLHEYMEAESTTADIKEELIETKYEDIKMEFEEMDLVQVKMEPVSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00827237;
- 90% Identity
- iTF_00827237;
- 80% Identity
- iTF_00826044;