Hato009981.1
Basic Information
- Insect
- Hypomecis atomaria
- Gene Symbol
- -
- Assembly
- GCA_964007245.1
- Location
- OZ023285.1:4366050-4377945[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-12 2.2e-09 38.0 0.1 1 43 11 53 11 55 0.92
Sequence Information
- Coding Sequence
- ATGAAAAAGAAGTTGGGAAGAAGAGAATGGACGGAAGATACTTTACTGGCAGCTTTAGCAGCAATCAAGCAGAAGCAATTGGGATTGAATGCTGCCGCTGCATTTTATGGAGTTCCAAAGTCCACCCTCAGTGATTATAAGAGAAAAAACAGAACTAGCAAAAAATCATTAGGACCTAAACCTATTATGGACCGAGAACAAGAAAACGAACTAGTTGGAACAATACTCGAATCTGGACAACGTCCTACACCAAAGTTTATAAGGAGACAAGCTTACTTATTATATCAGTCGCAGAAGTCCCGACGCAGTTGGATCTGGTCGTACTTCGAGTACGTCTCCACGACGcaggccaagtgcaagttgtgCCAACGACACATCAACCACGGCGGCAACGCGACCGGCAACATGAACCGACACCTCAAGACTATACACCACAAGACCGATACTGAACGagACAACCAGCCAGACATGTCTTGGGTGTGGAAGGTGTACGTCCGTGAAGCTGGCTCCGTCACGTGCAAGATCTGCCAGCACCGGCTCACGTGGACCTCCTCGGAGGACATGGCCTCGCTCACGCTGCATCTCAAGAGGGAGCACGGGGTGGTGTCCGGAGACCAGATCATCACGGGCACCGAGTGTGACCAGGAGGAGAATTGA
- Protein Sequence
- MKKKLGRREWTEDTLLAALAAIKQKQLGLNAAAAFYGVPKSTLSDYKRKNRTSKKSLGPKPIMDREQENELVGTILESGQRPTPKFIRRQAYLLYQSQKSRRSWIWSYFEYVSTTQAKCKLCQRHINHGGNATGNMNRHLKTIHHKTDTERDNQPDMSWVWKVYVREAGSVTCKICQHRLTWTSSEDMASLTLHLKREHGVVSGDQIITGTECDQEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826031;
- 90% Identity
- iTF_00826031;
- 80% Identity
- iTF_00826031;