Hmis004585.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- -
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000007.1:308948-309322[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-14 1.1e-11 45.0 0.0 1 37 13 49 13 57 0.92
Sequence Information
- Coding Sequence
- atgGGGAAGGAGAAAGCTACAGATCCACGAAAATGGAcagaagaaaatatgaaaaaagctATAGAAGATGTCAGAAGCAAGAAAATGGGAGTTAATGAAGCTAGCCGGACATATGAAATACCATCAAGAACCTTACGTAGACACATCCTGAAAGGCTGGGATAGCAAGCAGAATATAGGTAGACCTTCGGAATTAGGTCATGAAAATGAATTGAGACTTGTAGCTCACATCAAACGTCTCGAATACATCGGATTTCCTCTAGAACAATCAAGACTGCAGTCTATTGCTTACGACTTTGCTGAAAAACTAGAATTACCTCATCGATTCAATAAGGAGAAAAAACAAGCTGGATGGGATTGGTTCCAAGGGTCTTGA
- Protein Sequence
- MGKEKATDPRKWTEENMKKAIEDVRSKKMGVNEASRTYEIPSRTLRRHILKGWDSKQNIGRPSELGHENELRLVAHIKRLEYIGFPLEQSRLQSIAYDFAEKLELPHRFNKEKKQAGWDWFQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065185; iTF_00276233; iTF_00835478; iTF_01076315;
- 90% Identity
- iTF_00065185;
- 80% Identity
- -