Basic Information

Insect: Hyphantria cunea
Gene Symbol: ZEB2
Assembly: GCA_003709505.1
Location: PKRV01000955.1:112798-121650[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.6 1.6e+02 3.1 0.8 2 23 203 225 202 225 0.91

2 10 0.0034 0.21 12.2 0.1 1 23 232 254 232 254 0.91

3 10 0.76 48 4.8 1.1 3 23 260 281 259 281 0.95

4 10 0.013 0.78 10.4 0.7 2 23 285 307 284 307 0.95

5 10 2.4e-06 0.00015 22.1 5.4 1 23 310 332 310 332 0.98

6 10 0.021 1.3 9.7 0.1 3 21 360 378 359 379 0.92

7 10 0.3 18 6.1 2.3 2 23 395 417 394 417 0.95

8 10 0.81 50 4.7 5.8 1 23 423 446 423 446 0.93

9 10 0.00022 0.014 15.9 0.2 3 23 457 477 456 477 0.99

10 10 0.0037 0.23 12.0 4.6 1 23 483 506 483 506 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.6	1.6e+02	3.1	0.8	2	23	203	225	202	225	0.91
2	10	0.0034	0.21	12.2	0.1	1	23	232	254	232	254	0.91
3	10	0.76	48	4.8	1.1	3	23	260	281	259	281	0.95
4	10	0.013	0.78	10.4	0.7	2	23	285	307	284	307	0.95
5	10	2.4e-06	0.00015	22.1	5.4	1	23	310	332	310	332	0.98
6	10	0.021	1.3	9.7	0.1	3	21	360	378	359	379	0.92
7	10	0.3	18	6.1	2.3	2	23	395	417	394	417	0.95
8	10	0.81	50	4.7	5.8	1	23	423	446	423	446	0.93
9	10	0.00022	0.014	15.9	0.2	3	23	457	477	456	477	0.99
10	10	0.0037	0.23	12.0	4.6	1	23	483	506	483	506	0.96

Sequence Information

Coding Sequence: atgtatgaaaCTGAGCAAAGAAATTATGATACGTTTTGCTTCGCGTGCCTAAGTAGTGACAGGAATCTCATAAGCATTGGAgaatatgctaatattatatcTAACATCGTCAGTAAATCAATCAaaGTATCAAAAAATGTCAAGTTATGTTGGGAATGTGTGGCTGTCCTGAAGAAGATCAAACTATTTAAGTCCAGAGTAGAAGAGGCACAGAGACTTTTATCCGCCCaatttagtaacaaaaaaaaaaGCATACTGAAAAGTTTAACCAGATTATCGCCCGTTacaccaaataatataatatttatcaccCACGACGATAAAGAAAcgtttaattcaattaaacatGAAATAGATAATTCTGAAGAAGAATTTAATTACAATGATGTAGACACAACAAGTGACaacgaaattaaaaaaggaCGAAATACCTCCATTAAAAGTAAGATAATAAAACGTCAGAAGAGGTCACATTACAGATTAATCTATGGTccgaatgtttataaaaaaagtttattgagAAAGAAGTTTTCAATCAAGCCTGGTGATGTATCGTTGTGGTATGATAAAGATAAATACagtcaattttataaaacgtgCAAGTTAAAATGTAGTTTATGTATTGAAGGATTTAACTCTAAGGAGAAATTGGACGGACATTATATGGCGTGTCATGATGAGAGTATCGGCCCACACGTGTGTCCCACCTGCAGCTGGCGCTTCCCCACAGAGGGCTCACTGGACGCGCACGTGGTCGATCACAAGTTCGCGCGAGCGTGCACCCGCTGCGGGTTCGAGTGCTACACGCTGCGGCGGCTGGACGCGCACATCACGCGCGCGCACAAGCTGGTGCAGTGCGTGTATTGTGGCCTGTGTCTACCGAATGTGCGTGAGTTCCGTGCGCATTACCGCGAGAAGCACAGCGTGTTCGTGTGCGAGCACTGCGGCAAGCGCTGCAGCACCAAGTACATGCTCGAGAAGCACATGAGTAGTCACTCAGCGCGGCTGGAGTGCGGGCGCTGCGGGCGCTCGTGCGCAGGCCACGGGGCGGGCGCGGCCGAGCGCGAGCACGCGTACTGCGCGCTGTGCGACAAGCAGTTCCGCGGCGCGCCCGCCTACCGCCGCCACCTGCTCAACACCACCGTGCACGCGCACGAGACCAACAAACTGGCCAAGAAGGTGCCGTGCCCGGAGTGCTGCAACACTTACTCGCGGCGCGCGTACATGATGAACCACTACCGACACGTGCACATGAACCAGTCCAAGTACTACTGTGAGCACTGCGATCGGCACTTCCTAAACCGCACTCGCTACGTGGAGCACGTGCGCTACAAGCACGAGGGCGCCAAGAGGGAGAGGAACAAGCTGTGTAATGTTTGCGGCCGAGGGTTCGCGACCAATCGCATCCTGGCGAACCACATCCGCACCCACTCCGGCGAGCGGCCTTACGAGTGTTCGCACTGCTCGGCCAAGTTCACGCAGAAGCACTCCATGTTGTCGCACGTCAAGTACATACACCTGAAGAGCAAGCGACACCCCACTTGGCAAACAAGCGACCAACTAACATCGTAG
Protein Sequence: MYETEQRNYDTFCFACLSSDRNLISIGEYANIISNIVSKSIKVSKNVKLCWECVAVLKKIKLFKSRVEEAQRLLSAQFSNKKKSILKSLTRLSPVTPNNIIFITHDDKETFNSIKHEIDNSEEEFNYNDVDTTSDNEIKKGRNTSIKSKIIKRQKRSHYRLIYGPNVYKKSLLRKKFSIKPGDVSLWYDKDKYSQFYKTCKLKCSLCIEGFNSKEKLDGHYMACHDESIGPHVCPTCSWRFPTEGSLDAHVVDHKFARACTRCGFECYTLRRLDAHITRAHKLVQCVYCGLCLPNVREFRAHYREKHSVFVCEHCGKRCSTKYMLEKHMSSHSARLECGRCGRSCAGHGAGAAEREHAYCALCDKQFRGAPAYRRHLLNTTVHAHETNKLAKKVPCPECCNTYSRRAYMMNHYRHVHMNQSKYYCEHCDRHFLNRTRYVEHVRYKHEGAKRERNKLCNVCGRGFATNRILANHIRTHSGERPYECSHCSAKFTQKHSMLSHVKYIHLKSKRHPTWQTSDQLTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -