Basic Information

Insect: Hyphantria cunea
Gene Symbol: -
Assembly: GCA_003709505.1
Location: PKRV01000179.1:795193-803868[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.5e-05 0.00096 19.5 0.5 2 23 451 473 450 473 0.95

2 8 0.0012 0.075 13.6 0.7 2 23 479 500 479 500 0.97

3 8 2.3e-05 0.0014 19.0 2.6 1 23 508 530 508 530 0.97

4 8 1.6e-05 0.001 19.5 0.5 3 23 537 557 536 557 0.99

5 8 0.00011 0.007 16.8 1.4 1 23 566 588 566 588 0.99

6 8 2.5e-06 0.00015 22.0 0.7 1 23 594 617 594 617 0.95

7 8 0.019 1.2 9.8 0.5 1 12 623 634 623 646 0.87

8 8 0.48 30 5.4 3.3 1 23 654 677 654 677 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.5e-05	0.00096	19.5	0.5	2	23	451	473	450	473	0.95
2	8	0.0012	0.075	13.6	0.7	2	23	479	500	479	500	0.97
3	8	2.3e-05	0.0014	19.0	2.6	1	23	508	530	508	530	0.97
4	8	1.6e-05	0.001	19.5	0.5	3	23	537	557	536	557	0.99
5	8	0.00011	0.007	16.8	1.4	1	23	566	588	566	588	0.99
6	8	2.5e-06	0.00015	22.0	0.7	1	23	594	617	594	617	0.95
7	8	0.019	1.2	9.8	0.5	1	12	623	634	623	646	0.87
8	8	0.48	30	5.4	3.3	1	23	654	677	654	677	0.94

Sequence Information

Coding Sequence: ATGTTGCATAATACGGGGCAATATGATCCTAGCGAGACCCCTGTAAACATGGCAGCACCAGTGAATATGACCCCTGGTGCCAATATGAATATCGTAAGCAATATCAATCATTTGGCCAAACTAGGCCACGGAAGTACTCCATCGCCTAGCGTACCCTATGGCCTAGGAGACTACGCtgtttatcatcaacaacaattTAATATGCCGACTCAAACGGCTCAGTTTCCAAACCATCAATATCAACATTTGGGTTTCCCACACACTTATACTAATCATAATCCTAATTCAGCCGAAGAGAGCTTCCAGAACGGTATGTTGCCTATGAATTTGAACATATACAATGAACATAACGTAAATATGTTTTCTCACGAGAAAAAAATGAGTGAGGTTGTCAGACCCGATGTAATAAGAGAACAAAATGTTAAGAAGGTAGCATTAAATATACCTCAAATACCGAATAATGTATTGCCCAAACAGTCTTCACTTGAAAACGATTATCTACATAATGATTCATTCCACAACCCAAATCACAATTTAGATTTAAGTATGAAACCAAACCCGGAGAGAATAGAAATAAGTagttttagaagaaaaaagatCGAAAACACAGTGAAACTTATTgagaatattttgattaattcttCCAATACTAAACCTAAAACACTTGTACAAGAATCTATTAATGATATACCTATTGAAATAGATCATCGTGAAAAACCTTCAACAAACATTGTAAGAACAGAGGCTGATGAAGCTAAGAATGATGCAGTATCTTTAACATTAGCAGATTTAAAACAAGATTTATCCCAAGACGCCATTATTAAAAGTCCTACAATGAACGATGATGACATTGAAAAACCAGATGCAAATGAACTGTCGGATATAGAAGATGTGAAACCACTTAATATCACATTAGAAATTGTTCCACAGGACGATCCGGAAACATCCGAGAAAtgtgtagaaataaaaatagagaacgCAAGTTGGACTGATACAGATTATGTACAACCGTTTTTTAGAGATTGTAATTCATTCCAAAGAGAACATGCAATGGATTTTAGAATTGTTGACGGAGATTCTAGTGTTGCTGAAGCACTTGTTGCTATTCAAAATACAGAGGTAAAATCAGAAGCATGCTATGAATGCCCACACTGCTGTGTACTCTTTAAACATCCAAAGAGATTCCTCATCCACACAAAGTGGCATACCTTTGGTCTTACAAATGAGAAGAGGATAgagttaatgaaggaaagagaGGAGCAGAGAAATCAACGGAAGGAAGCGAAGATTATTGAGAGGATGAATGCAAAGGAGATAACAGATACAAAGAAAGTTGAAGGGAAGACTTGGCCTTGTAAGGATTGTGATAAAATTTTCAGTGCAAAGGGTAGTTTGAAGAATCATCGGCAGAggtCTCATCCAACTCGAGTTCGAGAATGCAGAATTTGTCACAAGTCCCTGGTCGGTTGGCTCTCTCTTCGGAACCACATGGCTACACATACCGGCGAAGCAGGTGTTGGTTTTCAGTGCAGCGAGTGTCCGAAACGATTTAAATATGCGCATTCTCTGGCAAAACATTCAGATACACATTTGgaaAAAGTACATGGATGTGAGAACTGTCCCAAAAAGTTTGGTTCTCAAGCGCTACTAAAGATGCACATGAAAACTCATGAACGGCACTCGAGAGGCGCCACCTTCAGGTGTACATATTGTGCTAAAGGGTTCTTCGAATCGTACAGTCTTCAAGTACATGAAAGAACACATCGGAACGAGAGACCTTACCTTTGTGAGATATGTAACACAAGTTTCGGGACTAATTCCAGTCTCAAAAGACATCTGAAAGTCtcTCACAGCACTTCAAAACCCTTTGAGTGTTCCATTTGTCATCGGTCGTTCTCTACGGAGCCGATCAGGGATCGTCATGAACAGAGGGTACACAGCAAACCAGAGGATTTCAAGTTCCCCTGTAAGCAGTGTGATTGCAAgtatttaaaacTAAAGGACTTGCAGAAACACGTGTACAAAGCTCACCCCAAAAACAAGAGAAGGAAACGAGCAAAAAGCGAGACAGAGCCCGAAGAGGACTCAGAATAG
Protein Sequence: MLHNTGQYDPSETPVNMAAPVNMTPGANMNIVSNINHLAKLGHGSTPSPSVPYGLGDYAVYHQQQFNMPTQTAQFPNHQYQHLGFPHTYTNHNPNSAEESFQNGMLPMNLNIYNEHNVNMFSHEKKMSEVVRPDVIREQNVKKVALNIPQIPNNVLPKQSSLENDYLHNDSFHNPNHNLDLSMKPNPERIEISSFRRKKIENTVKLIENILINSSNTKPKTLVQESINDIPIEIDHREKPSTNIVRTEADEAKNDAVSLTLADLKQDLSQDAIIKSPTMNDDDIEKPDANELSDIEDVKPLNITLEIVPQDDPETSEKCVEIKIENASWTDTDYVQPFFRDCNSFQREHAMDFRIVDGDSSVAEALVAIQNTEVKSEACYECPHCCVLFKHPKRFLIHTKWHTFGLTNEKRIELMKEREEQRNQRKEAKIIERMNAKEITDTKKVEGKTWPCKDCDKIFSAKGSLKNHRQRSHPTRVRECRICHKSLVGWLSLRNHMATHTGEAGVGFQCSECPKRFKYAHSLAKHSDTHLEKVHGCENCPKKFGSQALLKMHMKTHERHSRGATFRCTYCAKGFFESYSLQVHERTHRNERPYLCEICNTSFGTNSSLKRHLKVSHSTSKPFECSICHRSFSTEPIRDRHEQRVHSKPEDFKFPCKQCDCKYLKLKDLQKHVYKAHPKNKRRKRAKSETEPEEDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00157523;
90% Identity: iTF_01360965;
80% Identity: -