Basic Information

Insect: Hyphantria cunea
Gene Symbol: -
Assembly: GCA_003709505.1
Location: PKRV01000027.1:858198-868452[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.6 2.3e+02 2.6 0.8 1 23 84 107 84 107 0.94

2 19 0.49 31 5.4 0.3 3 23 112 132 110 132 0.96

3 19 0.12 7.7 7.2 0.4 2 23 385 407 384 407 0.95

4 19 0.67 42 4.9 0.1 1 21 415 435 415 436 0.94

5 19 1.9 1.2e+02 3.5 0.4 3 23 447 467 446 467 0.83

6 19 4.5 2.8e+02 2.3 2.1 1 23 483 506 483 510 0.84

7 19 0.0013 0.084 13.4 0.6 1 23 515 538 515 538 0.96

8 19 0.26 16 6.3 1.1 2 23 550 572 549 572 0.96

9 19 0.0022 0.14 12.7 0.0 2 23 615 637 614 637 0.93

10 19 7.7 4.8e+02 1.6 3.4 1 23 642 665 642 665 0.93

11 19 3.1e-05 0.0019 18.6 1.9 1 23 671 693 671 693 0.97

12 19 0.00017 0.011 16.3 1.6 1 23 700 722 700 722 0.98

13 19 8e-05 0.005 17.3 2.3 1 23 727 749 727 749 0.96

14 19 3.4e-05 0.0021 18.4 0.6 1 23 755 777 755 777 0.98

15 19 4.4e-07 2.8e-05 24.4 1.9 1 23 783 805 783 805 0.98

16 19 0.00035 0.022 15.3 3.5 2 23 812 833 812 833 0.98

17 19 0.00084 0.052 14.1 0.3 2 23 841 863 840 863 0.97

18 19 0.00031 0.019 15.4 0.3 1 23 868 890 868 890 0.95

19 19 0.041 2.5 8.8 4.1 1 23 896 919 896 919 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.6	2.3e+02	2.6	0.8	1	23	84	107	84	107	0.94
2	19	0.49	31	5.4	0.3	3	23	112	132	110	132	0.96
3	19	0.12	7.7	7.2	0.4	2	23	385	407	384	407	0.95
4	19	0.67	42	4.9	0.1	1	21	415	435	415	436	0.94
5	19	1.9	1.2e+02	3.5	0.4	3	23	447	467	446	467	0.83
6	19	4.5	2.8e+02	2.3	2.1	1	23	483	506	483	510	0.84
7	19	0.0013	0.084	13.4	0.6	1	23	515	538	515	538	0.96
8	19	0.26	16	6.3	1.1	2	23	550	572	549	572	0.96
9	19	0.0022	0.14	12.7	0.0	2	23	615	637	614	637	0.93
10	19	7.7	4.8e+02	1.6	3.4	1	23	642	665	642	665	0.93
11	19	3.1e-05	0.0019	18.6	1.9	1	23	671	693	671	693	0.97
12	19	0.00017	0.011	16.3	1.6	1	23	700	722	700	722	0.98
13	19	8e-05	0.005	17.3	2.3	1	23	727	749	727	749	0.96
14	19	3.4e-05	0.0021	18.4	0.6	1	23	755	777	755	777	0.98
15	19	4.4e-07	2.8e-05	24.4	1.9	1	23	783	805	783	805	0.98
16	19	0.00035	0.022	15.3	3.5	2	23	812	833	812	833	0.98
17	19	0.00084	0.052	14.1	0.3	2	23	841	863	840	863	0.97
18	19	0.00031	0.019	15.4	0.3	1	23	868	890	868	890	0.95
19	19	0.041	2.5	8.8	4.1	1	23	896	919	896	919	0.97

Sequence Information

Coding Sequence: ATGACGTCTGATGAATCCGACGATGAACCGCTATCTGTTATTGCGGCTAACAAGAAGCTACACCCTGAAGCCTACATCGTAAAAAGTGGAATATTGTCCAAAacaaaagttgttaaaaaaaagaagaaaaaagcgCCTCCAAAGCGATTACCGATTACTATAAACATTCAGAAACCTGATCTACCCCCAGTTATAGAAAGGCCTGCGGACGTTTGGCTTTATTTGAAAGATTTTAACCCTGGAGGACCTTACAGTTGCTTATTGTGTCCTGAGTGGTTTATAAATAGGTCTAAAATAATTCTACACTATTGTTTGAATCACAAGAAAGATTTTTGTGGTATCTGTAGgtACTTTGTGCCAGATAGGGAAAGTTGGTATAGCCATATGAAGTTCCATACACCTTGGCCATGTTCACAGTGCATTGAAAACTTCCCAACTGAGCCTATTTTACGTTTACATCTTAAGACAGTTCATAAACTTGTGCACTGCAGACTCTGCCATTTCAGAGTTTCTGATGGTGAGTTATACAATtcacatttatttcaaaaacataatgTGTCAAGTGTAGCAAATAAGGATGATGAAAATCTATGGAGTTTCGATGATGATGGATCAACTATCTTCTCCTGTGTACTATGTTCAAAGACTGATAATGCTTCAAGATTGTTTTTCAATCATTACATGGGTTACCACCATTTTACCTTAAAGTGCTTCACATATGTTTTGGCTGGGAAAGATGTACCATTTGTGGTGCACGGAGCTGATGTTAGAAGTGAATTCATTGAAGAGCAATTGAAACGTCATCCTCGTTATGGCTATATAGATTTAGAAATGAAAGTTGGCAATGGCCTAGGATCAAATGCAACTGATTCAAAAGATTTGCTCAAAGGTTATTTGCCAGATATCAAGCAGGAGAATGTAAGTGGAGATGAAACAAAGGGTAAGAACGAGAAAGAGACCCAACTTTTAGAGTTTGTGAAGAGTTATGAGGGTGAGGAAGACTTTGATGTAACACTAACTGAGTTGATTGTGTTAGAAAAATGTTTCTTTGATTATATATCTCGAGAGTTGTCTGATATCAAAGCAAATGTAGTTCATGCACTTTCTGATATTGATTATGAGAAAGCCACTGGCGACTTAACTATGGATGTAGTTTGCTCTCTATGCAATACGGAGTACAACAGTGTGCAGACATTTGTCACGCACATGACAAGAATGCATTCTGTAAAATGTAAGTCGATTTATTCATGTAGACTTTGTGCAGCAATTTTCGATAGCCAGAATGAGCTTGACAACCATGTTAACAGGGAGTTGCGTGATTTCAAAAATCTTTGGTTGTGTCAGTTTTGTGATAAGGAGTTTGAAGATCGGCTAGAAGGAAGACAACATTTGTCAGAGCACTGGGATTTGTTAGAATATGATAATTGTTTTAGTCCACATTTGGGATTTAAGTGTACATATTGTCCAACATTGTTTTGGCATGAAAAGGATAGAGAAATTCATCAAGTTCGAGTGCATCTTTCTAGGCACAGAGAAAGTTACTATAACTGTGAAATATGCAGAGAGGTGTTCAGCGATAAGATTTGGTTCAACTACCACTACCTATCAAGTCACGCTACTGCAGATAAAGTTCCTTTGTACCTCATGAAATGTTGTGTATGTAGTTTGGTACTCTCAAATGTGGACAATATGAGGGCTCACTTTAAATCTGAACATCCAGaagcaaaaaaattgtattgctCTTTAGATGCTTGCAAATTTAGACCATTGAGTCACAGGAAGAGCTTTAAACTTCATGTGCGATCTATCCACAATCCTCGCCATCGTGTTGAACGCAACTTAGAATGTACAGTCTGTGGCCGGGAGTTTAACACCTCGCGAGCCGCAAGCGCGCACATGGCCCAGGCTCATGGGCCTGGCAAATTCAAGTGTAAATTGTGTGAAGAAGTGCTGCACACCATGGATGAGAGaaaactCCATTACCTCATATGTCACCCTGGACAGCACCCATTCGAGTGTACTGAGTGCGGCAAGTCTTTCCAGTACAAGTCTTCTTTGTACATGCACAAACAAGAACACATGCCGAATAAACAGAACTATACTTGCACATACTGTGGGAAGTCATTCTTGAAACGCGACTCGTTCCGCGAACATGTCCAAATCCACGAAGGGCCGCGTCACGCTTGCTCGTACTGTCCGATGCGGTTCGTTCAACGCTCGAACATGTTACGTCACGAGCGACGTCACACGGGCGAGAGGCCCTACGCTTGTCCGCAATGTCCGCGTAGTTTTGCCGATAAGGGAGCCTGCAACTCACATATgagAACCCATTCAAGGGATACTTCGTATGCGTGTATGTACTGTGGGAAGACCTTCGTCCAGAAGTCTAAACTGACATATCATATAAGGAAGCACACAGGCGAGAatTTAGAAACGTGCACAGTCTGTTCGAAGTTATTTACAAGCGCCTGTTCATTACGTGAGCATATGAAGACACATGTCGTTAAGACGAACACTGTCAAGTGTCCCTTGTGTGACCGCATGTACCCAGACGACCGCTACATGCTGCGGCACCTGCGCACGTCGCACACGCGCGCTCGTCACGCGTGCCCGCTGTGCGGCAAGATGCTCAGCAGCGCCGCCGGCCTGCGCCACCACGTCGTCACGCACACCACCCTCAAGAGGTTCAGGtGCAAATTATGTCCAAAGGCGTGCTCCGTGAAAAGAACAATTGTGAAGCATTTCCGCAGACGACACGGTTTTAAAGGAGGCGAACCTAATGTGAAAGAGTTTTACACTAGACTGGAACCTAGAGAGTGCAACCTTGGCCTCGACGAAGATGTCATGACCAGCATATTTGGACCTCCAAAGAAACCAGCGAACGAACTTCTAATTGGAGACTATGTGACATTTACCAACTTTGATCAAGAGAATAAAGATCAAGAGAGACAAGCAGAGTCTAGCCAAGAcatggatgatgatgatgatgaagatgatgaacaAAACGATGGTAAATCAGATTCGGAAGATACAAGAGACAGTGAGAAAGACAACAACAGGAATTCTGGTAGTGATGCGGAGCATGATATAAAGACACATATtgttaaaattgaaactaaagaTTATAGTGATCAGGGGGAGAATGATTTAGAGCCTACTGACTTTGTCAGTGTTAAAATTGAACCTATGGATCATGACGATAtggatgaaaattaa
Protein Sequence: MTSDESDDEPLSVIAANKKLHPEAYIVKSGILSKTKVVKKKKKKAPPKRLPITINIQKPDLPPVIERPADVWLYLKDFNPGGPYSCLLCPEWFINRSKIILHYCLNHKKDFCGICRYFVPDRESWYSHMKFHTPWPCSQCIENFPTEPILRLHLKTVHKLVHCRLCHFRVSDGELYNSHLFQKHNVSSVANKDDENLWSFDDDGSTIFSCVLCSKTDNASRLFFNHYMGYHHFTLKCFTYVLAGKDVPFVVHGADVRSEFIEEQLKRHPRYGYIDLEMKVGNGLGSNATDSKDLLKGYLPDIKQENVSGDETKGKNEKETQLLEFVKSYEGEEDFDVTLTELIVLEKCFFDYISRELSDIKANVVHALSDIDYEKATGDLTMDVVCSLCNTEYNSVQTFVTHMTRMHSVKCKSIYSCRLCAAIFDSQNELDNHVNRELRDFKNLWLCQFCDKEFEDRLEGRQHLSEHWDLLEYDNCFSPHLGFKCTYCPTLFWHEKDREIHQVRVHLSRHRESYYNCEICREVFSDKIWFNYHYLSSHATADKVPLYLMKCCVCSLVLSNVDNMRAHFKSEHPEAKKLYCSLDACKFRPLSHRKSFKLHVRSIHNPRHRVERNLECTVCGREFNTSRAASAHMAQAHGPGKFKCKLCEEVLHTMDERKLHYLICHPGQHPFECTECGKSFQYKSSLYMHKQEHMPNKQNYTCTYCGKSFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPQCPRSFADKGACNSHMRTHSRDTSYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKTHVVKTNTVKCPLCDRMYPDDRYMLRHLRTSHTRARHACPLCGKMLSSAAGLRHHVVTHTTLKRFRCKLCPKACSVKRTIVKHFRRRHGFKGGEPNVKEFYTRLEPRECNLGLDEDVMTSIFGPPKKPANELLIGDYVTFTNFDQENKDQERQAESSQDMDDDDDEDDEQNDGKSDSEDTRDSEKDNNRNSGSDAEHDIKTHIVKIETKDYSDQGENDLEPTDFVSVKIEPMDHDDMDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441828;
90% Identity: iTF_00157475;
80% Identity: -