Hcun011090.1
Basic Information
- Insect
- Hyphantria cunea
- Gene Symbol
- Zfy1
- Assembly
- GCA_003709505.1
- Location
- PKRV01002628.1:562933-568447[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.4 2.1e+02 2.7 4.7 1 23 255 277 255 277 0.95 2 13 0.00014 0.0087 16.5 2.0 2 23 284 306 283 306 0.92 3 13 3.5e-07 2.2e-05 24.7 0.8 1 23 312 334 312 334 0.99 4 13 7.8e-07 4.8e-05 23.6 4.3 1 23 340 362 340 362 0.98 5 13 0.00021 0.013 16.0 1.1 1 23 368 390 368 390 0.98 6 13 4.1e-05 0.0026 18.2 2.6 1 23 396 418 396 418 0.97 7 13 0.00063 0.039 14.5 1.6 1 23 424 447 424 447 0.97 8 13 2.8 1.7e+02 3.0 0.8 3 23 496 515 496 515 0.86 9 13 5.1e-07 3.2e-05 24.2 0.2 1 23 521 544 521 544 0.96 10 13 1e-05 0.00064 20.1 3.5 1 23 550 572 550 572 0.98 11 13 0.0057 0.36 11.4 0.0 1 23 578 600 578 600 0.98 12 13 0.00051 0.031 14.8 0.0 2 23 606 627 605 627 0.96 13 13 0.00038 0.023 15.2 0.4 6 23 637 654 636 654 0.99
Sequence Information
- Coding Sequence
- ATGAATAACGGTACTgaacaagtatatttattaaattctgtaCAAAGTCATCCAGGTTTACCACAAAAGCAAGTATCGACACACGGAACCACACCAGTCAATCTTGAAAATGTGGATAATTTCTCGAATGTGTGTCGGACATGTGCCACCATCACACAACTTGTCATCCCCATATTTACCGCAGAGGGACTGGAGCATCACTTGGCTGAAAAAATACAGAAACATTTGCCCATATCGGTTGCCGATACTGATCTCTTGCCTTTAGTAATGTGCTATCAATGTGTCAGCACACTGCTAGCTTGGCATGAGTTAGTTGAGTGCTGTTTGCAGGCTGAACGAGCCCTCAAAGCAAAGATCGGCGTAGATACCACTATTGAAACTCAAAAGATAATCCAGGCACCTAGCATCACTACAGATGAGGACTCACAAAGCAAgGACGACTCTCAGTTCCTGGATGCGTCAGAAAAATCAGACCGATCAGATGATAAACCTCTTTCTACGTTATCTACTAAAAACCCCGAGGATCTTTATAGCAAGTTTTATAGAGCGCTCGTTAACTTTAGAAATCATTATATCGGAGACCATGACAATCGAGAGTCTTATCCTGATTTCACCGACTCCTCCAGTGCATCAGAAGTTGAAGAAAATAGTATAGACGGTTACGACGACCTAACCAAGTGTAACATGAGAAAAGATATAATGGATAAGGAGACCAGACTGGAACTTAATCAGGCACAAACTAAGATTAATGGAAAAGTATTCTATACGTGTAGAATCTGCAGCAAGAACTTGAGCTCGACACACACTTACATGTTCCATAAAAGAATACATACCGGCGAGAGGCCCTGCGTGTGTCACATATGTGGAAAACAATTCCGAGCTCCAAACGGATTACAACGGCATCTGACGGAAACGCACGAACGTCTACGAAGATACACCTGCAGTCTATGTCCTAAAAACTTCGCCAATTCGCAGAATTTGAAGCAACATTTGAGGATCCACACCGGTGAGAGACCGTTCGTGTGCTCGCACTGCGGCAAAAGATTTACTCAGAGCGCTTCGCTACACGTGCATTTAAAAACTCACAGTGAACAGTTTCCGTATCACTGCGCCGAGTGCGGGGCGAAATTTCGGCTCCGATCCGGTTTAGCGAGGCACAGGCTCAAGCACACGGGCGAACGTCCGCATGTGTGCGCTCTCTGCGGGAAAGGATTTCGACAACGACACGAGTTAAACTCTCATACTCTGTCCCACTCAGACGCGAAGCCCTTCTCCTGCACTGCGTGCGGGTCGGCGTTCCGTCAACGGCGAGCTCTCCGCCATCACGTGAAGAGAATCCACGAGAACGAGACGGCGCCGAGGGAGACCGCTCATCCTATTATCTACAATCACGTCGAGGAACGCGACGACGACGGCGTCGGAGCGACGAAAAAAAATAGACCGACGGCGGCGACCGTCGCCTCCGACTCGCGGGGGACCGTGTGGTGCGAGAAGTGCAATAAAAGCGTGTCGGTGGTGTCCCGGCGGAGACACGAGCGGCTGCACGACGGCGAGAAGCGGTACAGCTGCCACACGTGCGGGCGCGCCTTCGCCGACAGCGGCAACCTCGCGCGACACGTCCGCGCGCTGCACGCGCGGCAGAGGCCGTTCTCGTGCACGACATGCGAGAAGACGTTCTCTCGGCGCGCGCACCTGGAGGACCACTCCAGGTCGCACTCGAAGCTGCGCGAGTTCGTGTGCGAGTGGTGCGGCGCGGCGTCCAAGTCGGGCGCGGCGCTGCGCATGCACGCGCGCACGCACCGGCCGCGCGCGCTGCGCTGCGTGGGCTGCGGCGCCGCCTTCGGGCGCGCGGCCGAGCTGCGCGCGCACCGCTCCGTGCACTCGGGCGAGCGCGCGCACGCCTGCGCCTGCGGCCGCGCCTTCCGCCTGCGCACGCAGCTCGCGCGCCACCAGCGCACGCACCCGCCCCCGCCCCACTGA
- Protein Sequence
- MNNGTEQVYLLNSVQSHPGLPQKQVSTHGTTPVNLENVDNFSNVCRTCATITQLVIPIFTAEGLEHHLAEKIQKHLPISVADTDLLPLVMCYQCVSTLLAWHELVECCLQAERALKAKIGVDTTIETQKIIQAPSITTDEDSQSKDDSQFLDASEKSDRSDDKPLSTLSTKNPEDLYSKFYRALVNFRNHYIGDHDNRESYPDFTDSSSASEVEENSIDGYDDLTKCNMRKDIMDKETRLELNQAQTKINGKVFYTCRICSKNLSSTHTYMFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHERLRRYTCSLCPKNFANSQNLKQHLRIHTGERPFVCSHCGKRFTQSASLHVHLKTHSEQFPYHCAECGAKFRLRSGLARHRLKHTGERPHVCALCGKGFRQRHELNSHTLSHSDAKPFSCTACGSAFRQRRALRHHVKRIHENETAPRETAHPIIYNHVEERDDDGVGATKKNRPTAATVASDSRGTVWCEKCNKSVSVVSRRRHERLHDGEKRYSCHTCGRAFADSGNLARHVRALHARQRPFSCTTCEKTFSRRAHLEDHSRSHSKLREFVCEWCGAASKSGAALRMHARTHRPRALRCVGCGAAFGRAAELRAHRSVHSGERAHACACGRAFRLRTQLARHQRTHPPPPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -