Basic Information

Insect: Hyphantria cunea
Gene Symbol: -
Assembly: GCA_003709505.1
Location: PKRV01000277.1:703357-714843[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0039 0.24 12.0 1.1 3 23 208 229 207 229 0.96

2 23 0.24 15 6.3 0.3 1 22 614 635 614 635 0.95

3 23 4.6 2.9e+02 2.3 0.2 1 22 677 698 677 700 0.82

4 23 0.0004 0.025 15.1 1.1 3 22 711 730 709 730 0.94

5 23 0.42 26 5.6 0.0 3 23 739 760 737 760 0.89

6 23 0.012 0.77 10.4 0.2 3 23 780 801 778 801 0.96

7 23 0.0013 0.083 13.4 2.5 1 23 807 830 807 830 0.95

8 23 0.088 5.5 7.7 0.0 1 23 857 880 857 880 0.90

9 23 0.0038 0.24 12.0 3.5 1 23 885 907 885 907 0.97

10 23 0.054 3.4 8.4 0.1 1 23 913 936 913 936 0.95

11 23 0.0016 0.1 13.2 1.3 1 23 949 971 949 971 0.97

12 23 0.00012 0.0077 16.7 1.8 1 23 1024 1047 1024 1047 0.97

13 23 0.0059 0.37 11.4 1.1 1 23 1107 1130 1107 1130 0.96

14 23 0.0017 0.1 13.1 2.1 2 23 1157 1179 1156 1179 0.95

15 23 0.061 3.8 8.2 0.1 2 23 1185 1207 1184 1207 0.93

16 23 0.0069 0.43 11.2 0.2 1 21 1251 1271 1251 1272 0.95

17 23 0.00029 0.018 15.5 1.0 1 23 1282 1304 1282 1304 0.93

18 23 6.2e-05 0.0038 17.6 0.3 2 23 1394 1416 1394 1416 0.93

19 23 2.8e-07 1.7e-05 25.0 1.4 3 23 1423 1443 1422 1443 0.98

20 23 0.0083 0.52 10.9 1.1 1 23 1462 1484 1462 1485 0.94

21 23 0.084 5.3 7.8 0.0 1 23 1510 1532 1510 1532 0.97

22 23 0.019 1.2 9.8 0.6 1 23 1538 1561 1538 1561 0.95

23 23 0.00018 0.011 16.2 0.4 1 23 1569 1592 1569 1592 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0039	0.24	12.0	1.1	3	23	208	229	207	229	0.96
2	23	0.24	15	6.3	0.3	1	22	614	635	614	635	0.95
3	23	4.6	2.9e+02	2.3	0.2	1	22	677	698	677	700	0.82
4	23	0.0004	0.025	15.1	1.1	3	22	711	730	709	730	0.94
5	23	0.42	26	5.6	0.0	3	23	739	760	737	760	0.89
6	23	0.012	0.77	10.4	0.2	3	23	780	801	778	801	0.96
7	23	0.0013	0.083	13.4	2.5	1	23	807	830	807	830	0.95
8	23	0.088	5.5	7.7	0.0	1	23	857	880	857	880	0.90
9	23	0.0038	0.24	12.0	3.5	1	23	885	907	885	907	0.97
10	23	0.054	3.4	8.4	0.1	1	23	913	936	913	936	0.95
11	23	0.0016	0.1	13.2	1.3	1	23	949	971	949	971	0.97
12	23	0.00012	0.0077	16.7	1.8	1	23	1024	1047	1024	1047	0.97
13	23	0.0059	0.37	11.4	1.1	1	23	1107	1130	1107	1130	0.96
14	23	0.0017	0.1	13.1	2.1	2	23	1157	1179	1156	1179	0.95
15	23	0.061	3.8	8.2	0.1	2	23	1185	1207	1184	1207	0.93
16	23	0.0069	0.43	11.2	0.2	1	21	1251	1271	1251	1272	0.95
17	23	0.00029	0.018	15.5	1.0	1	23	1282	1304	1282	1304	0.93
18	23	6.2e-05	0.0038	17.6	0.3	2	23	1394	1416	1394	1416	0.93
19	23	2.8e-07	1.7e-05	25.0	1.4	3	23	1423	1443	1422	1443	0.98
20	23	0.0083	0.52	10.9	1.1	1	23	1462	1484	1462	1485	0.94
21	23	0.084	5.3	7.8	0.0	1	23	1510	1532	1510	1532	0.97
22	23	0.019	1.2	9.8	0.6	1	23	1538	1561	1538	1561	0.95
23	23	0.00018	0.011	16.2	0.4	1	23	1569	1592	1569	1592	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTATGCTTGTCAACTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCACGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCCGTagagGTAAACGAAAATGATGAGCTGCCCACGAATGTCTGTAGAAAATGTGTGGACAATGTCATTAATTGgcataagtttaaaaatgtttgtgaaaGGACTCAAAACAAACTACAGTCTTTgattaataaagatggcagccAACTAGAAGAGGTTCAAATCAAGAATGAACCTTTATCTGATGAAGCCTATGATGATGGAGTTGTTATTGAGGCCTCATATCCTGATAATGAGAACTTCAATGTGGCCAATAAAGTTCAACCTGAAGGCCCCCCAATCTTGGCTTCATTGGGACTCACACCTAGGAGTGATAAGGGAGTGGAAAGTGAGAAAGACGATGAAGAGGAAGAGGAAGGAGAATTGACCGAACCTGCTCAACCATTCCCCAAAATGCCTCACATGCCGGAAGTGTCCATAACAGTAATGCGACCTACAGGCGAGACCTTGCATGCGCGCCAAGGTATACATCAATTAGCGTCTAAGGACTGTCTTGTCTGCGGTCGCACTTATAGATATTCCCACAATGCTCGTCGACATGAGCTTACCGCTCACAGCTTTGACAGATATACTAACAAAATTACTCCAAAGAAAACATTAGGTCATTTGCAGCCCAAACTAAGACCAAACCCATTTAACCCTAAAGCGCGTTTGATGCCGAATCGTATTAGTCATAAGATGCAGTTCATGTCCAAAAACATCCCAACTAAAGTAGTACCTGTAAATAAGGTTATCACACCTCAGAAACCTATACCAATAAAATCAGCGAAAGCATCGCAAAACAATTTGCCTTATCCTCTTCGTATTAAAGCACTGAAAGATTTACAGATTAAGAAAAAGGAACCACAAATTTTAAAGACATTATTAACTACTAAACCAGAAGTTCTGGTTTCGGaacctgaaataataaattctggACCTGAAAGTCCAGAGACACTGATATCTGAACCTGAAATTGCTTCGTTCCAAGTAGAAGCAATACTTTCGGAACCCGACGCTGACGTCTACGACCAACAGCAGGGTGAGGAGGAAGTTGATGGAGACATGCATAATAATCAAGGTCAGAACTATGATACGGTTGACATGAATTCTGAAAATGAAATTGAGATCGCACGTCAGCAAGGTGAAGAGATAGATGGCGAAGAACAAGCTGATGGCGATGAAAACATGGATCAGAATGGTAATATGGATGGTGGTCAGAGTGAGAACGACCAAGAAGTAGACGATGCAGAAAGTCAAGAAAATGTAGAAATGGAGGATTGTTTAGAAATGAAAACTGAACATGAAATGAAGGAAGGTGAGCAATTGCAAGAAGGTAGGGACCATGaagaaatagaaatgaatcacgATGGTAACGATGATGAAGACGACGATGATTTACCAATGACAATACAGCCAGTAGTCGAAATTAATGAAGACTTGCAGGCTGATTCGTTTAATACCGACGTAGCTGACGGTGATGAACTCGAGGACAGCATTTATCCTAACGAGACCGTTGATCCTAATGAGACTGTAGACGAGGAGGAAGTGAAAGAACTCGATCCTGATAAAacatatgttacaaaaacgCAAAGAGACTTCATTTTAAAGTATCGTGACGTTATTGAGCAAATCAATACAAAACGTTGTTTGTGTTGTGACAGAGAACATCCGCGCCGAAAAGCTGTTATACAACACTTGCAGAAAAATGGGCACAAAGTACCTAAGCATACATGCTACAATTGCGTTGTAACATTTGGGCATATTGGTGCTTTGCTCAGCCACATGAGGTCAAATTCTTGCACTGATTTGTGGAAGATTATATACAACGAAAATGGTATTACCGATGACTTGGTTCTAGAAGATGAACCTAAGGAGGTCAAAGTTcagtataaagatatttttaatgctaGATCCTATGCTTGCAAACTATGTCCAGCAAAATTTCAGTTAAAACAATTCATAATGAAACATGTTTTAGATGCGCATGAAGATGGACAATCGAGAGTGCCTCTCGCATGTGTGCATTGTAGAGCGAGGTTTAAGGACAAGAGTTTGCTTAAAAAACATATTCGTAAAGGTGATTGTACAGTTTATGTAGCTTGTGACTTATGCCCAGAAACATTCGGAAATATGCAGAGTTTTAATGACCACGCATTAGCCGTTCATGCTGGTAGTTTTGAATCAGATAGCCAGAGCAAATGCGTTGACGGTCGGCCTACTGATTGTCCATTGTgtggtaaaaaaaatagcagCTATCCGAATTTagtaaaacatttgaaaattattcacaatgagGAAACGCCTCACTATTGTCAGCACTGTGACTCTAAATTTGAACAAGCTGCTGATCTCAATAAACATATCTACATGGAGCATTCTGACCGAACTCTAGGCATGCAACAAAACAATGAGCCGGATATGTCCATTGTTAAAGAAGAGGCTGAAGAGTATCACTACTCTTGTACTGAATGTAACGCCATATTTGAAACTGTTGATGCTTGGACAGACCACCAAGTTGCCGAACACAACCAAGTGGCTCATCACTGTGACCAGTGTGACAAGAAGTTTTTGCGTCCCTCTGAGCTTGCAGAACATAAGAACACGCATTTGAGGGTTAAGTTTTACCCTTGCAGCGTTTGCGCCAACTCTTATAGTACTCCTCAAAAACTTTCAGAACATGTGCAACAAGCCCATCCAGGGATTGGTGCAATAGCTGCAGCAGATTCGGAATTCTTTTGTGATATCTGTATCAGGTCATTTAAAAGTCGTCAAGCATATTCAAACCATATGCGTATACATGCAAAAGTGCCTACAACTAATCGAAAACCAGGAGACACTTCTTCTAACAAAGGCTTTTCGCCTTCAATTATAGGCAAACCTATTAAACAGGTATATCCTATGGTTCAACCGGGCTTTGTCTCATTTAAGCCTCATTACAATATTCCTAATGCTCCCTATTCTTGCGACATTTGTGGAAAGGGATTCATGCATAAAAAGAACATTTGGAAACACAAGAAAGTTTTACATGCAGATATATTAAACGAAAGAAATGACAGCGAGGAGAATACTATGCAAGCCTCCACTGAAGAGGACGAGCTTAATCCAGATGAAAACGGCGCAATCCTCTCGACGCCACAGTTTAATAGTTTTAACTTTGGCAATTTTGCTAATAATATCCAACAAACACAACAAGATACTATGCCTTATTCGTGTGAATTATGTCTAAAACGTTTTCCACTTAGAACCAGTTTATGGAAACATAAACGTGCCAAACATGGAATTATTAATCCTAATTCTAGTGGAGGCAACGATTCACAAACGCCGTCCGCTAGCGGGGAAGGAAGTAGCAGATCGAGTTGCACAATATGTAGAATTACGTTTTCGGATAAGAAATCTTATTACCGCCACCGAAAAAACGTTCACAAATCCACTGTtcaaatgtgtaaaatatgtgGAAAGCCCCTTAACTCGACATTAGAACTTTATGAACATTTGAAGGCTGCCCACGCAAGAGAACTTTTAGGTTACAACGCCAATCAAGGTTCGAGTAAATCTCTCGAAGTAGCACAAGAATTGGAACCTGATTATGAGAACGATCAAGAATCAGTCGATCCTAGCGTTGATTATCAGGCTCGGTACCCTTGTGACACGTGCGGCAAACAATTTGTGGGTTTGTTAGCTTTGCAAAACCATCAGTGTATTAATCAGGCTCCACCTCAACCACAAACGTTTGACTGTGAGATTTGTCACAAAAGCTACACGTCAATATCAGCTCTAAAGAGCCACCGTGGATGGCACTTACGATCACCAGATGGTAAAGCAGCTGCCAACAATAGTGGACTTTGGATGCCTCAGCATAAGGTCACAAGTAAAATTAGCAAACATGAAGTCATCGATCCAGTACAACTCGCTAAAGTTACACATTCCAGCCCTGCAGCTGCAGTAGCTGCTAAAAGAAGGCTCCCACCCGAGGTCGAAGTCACCGTTGTAAatcctaataaaaaaatgcgatCTGATGATTCTGTTGAATTAGAACAACAAAACTCTAGTTCAGCTGAAGATAGATATTGCAATATTTGCGACAAGGAGTTTACGAAACGCGCCGCTTATCAGCGCCATATGGATGAGGTCCATCAACCGAACTCGGTATTTTGTCCAGTGTGTGATAAAAGTTTCACACGAAAGTCTACGTTACTCATACACATGAAGAAGCACTATGAGAGTGGTGAAGGAAGCTCGAGTATGGTTGGACAAGTCGAGGAGGACTTGCATACATGTGACTTATGTGGAGCCCAATATGATGATGAAGAATCGCTAAGAGCACATCGAGTTAGGCATCACGGTGAAGAatctgaagatgatgatgacgatgatggaGACGATGGCAACGTGCCTATTCCTCCGCCAGGTGAGTTCACTTGCGGACAGTGTGGAGATGGTGTAGCCACACCACGAGATCTCATCGCTCATCGCACAATGCACTCTACTCCCACCAAATTCTTTTGTAACATATGTAAAGTATACTTTGCAAGAGCATTGGACCTCTCTTCTCATACACGAGCTAGACATGCAGACAACGACAAGGTATTCTTTCCTTGTGCCATGTGTGACAGATTCTACATGAACAAAAAGAGTTTGCAGCGGCATATTGAAATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSTRGELLPIFPTTSSDDSEPHVLASKIKDCVSVEVNENDELPTNVCRKCVDNVINWHKFKNVCERTQNKLQSLINKDGSQLEEVQIKNEPLSDEAYDDGVVIEASYPDNENFNVANKVQPEGPPILASLGLTPRSDKGVESEKDDEEEEEGELTEPAQPFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLGHLQPKLRPNPFNPKARLMPNRISHKMQFMSKNIPTKVVPVNKVITPQKPIPIKSAKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADVYDQQQGEEEVDGDMHNNQGQNYDTVDMNSENEIEIARQQGEEIDGEEQADGDENMDQNGNMDGGQSENDQEVDDAESQENVEMEDCLEMKTEHEMKEGEQLQEGRDHEEIEMNHDGNDDEDDDDLPMTIQPVVEINEDLQADSFNTDVADGDELEDSIYPNETVDPNETVDEEEVKELDPDKTYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLACVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPETFGNMQSFNDHALAVHAGSFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQAHPGIGAIAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDTSSNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDELNPDENGAILSTPQFNSFNFGNFANNIQQTQQDTMPYSCELCLKRFPLRTSLWKHKRAKHGIINPNSSGGNDSQTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSLEVAQELEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSMVGQVEEDLHTCDLCGAQYDDEESLRAHRVRHHGEESEDDDDDDGDDGNVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01492228;
90% Identity: -
80% Identity: -