Basic Information

Gene Symbol
dnajc2
Assembly
GCA_003709505.1
Location
PKRV01002955.1:97344-102471[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9 4.3e+03 -2.0 0.6 6 16 298 308 297 309 0.83
2 3 0.0006 0.66 10.2 0.0 2 31 433 466 432 470 0.86
3 3 1.3e-12 1.4e-09 38.0 0.1 3 44 558 603 556 605 0.91

Sequence Information

Coding Sequence
atgacTAACAGCGAATCCAGCGCGAATTCTAAGGTCGTGGCGATACCGTTGCCCTTCGTGAAAAGAAAAGTAGAGTGCGCTGGTGCAGCATTTCTTAAATATCACAATATTAAATGCCATGGTGGCGATGTGCTGTTTGAAACTCTCCAGTCGAACGAGAAGGCCGAAGAGGTCATTTTCGACGATGACGTTGAGTATCTGCGAAGCTTGGACCCTAAGGATTGGAAGATGCAGGACCATTACGCTGTTCTAGGTATGAAAAATTTGCGATATAAGGCCACCGATGATGATATAAAGCGTGCTTATAGGCAGAAAGTGTTAAAACACCATCCCGACAAGCGTAAGGCTCAAGGCGAGGAGGTTCGCAGTGACGATGACTACTTCACATGCATCACTAAAGCTTACGAGATACTAGGTACTCCAATTAAGCGCAGATCTTATGATTCTATAGACCATACCGTGGATGATACCGTGCCATCTCAAGCTGATATTAAAAGAGATGGCTTTTACAAATCTTTCGTTAAACATTTTGAATCGAACGCCCGGTGGTCAGAGAAGAAAAATGTGCCCTTGTTGGGTGATGAGAATAGTTCCCGAGAACAGGTCGAGAGGTTTTACGCGTTTTGGTATGACTTTGAATCGTGGCGCGAGTTCTCTTACCTAGATGAGGAGGAGAAAGAGAGAGGGCAGGATCGGGAGGAGAGGCGATGGATAGAAAAGCAAAACAAGGTTGCTCGAGCTAAACTGAAGAAGGAGGAAATGGCCCGCCTGCGTAGTTTAGTGGATCTAGCATATGCTTCTGACCCTCGAATTCAGCGGTTTAAGCAAGAAGATAAGGATAAAAAATTAGCTGCAAAACGAGCCAAACAGAATGCGGTCCAAGCCAAGAAAGCAGAAGAAGAACGGCTGTTGAAGGAAGCTCTGCTTGCCAAACAGAAAGCCGAAGAAGCAGAAAGAGCTCGGATAGAGGCAGCCCGAGCTGAACGAGAACAACAGAAAAAGAATCTTAGAAAGGAACGTAAAGCATTTAGAGATCTTTGCAAATCTAACAATTACTATTCTAAGAATGACGAGGAGAACGTTGCACATATGGCTGCAGTAGAAAAAATCTGTGAAATGATGAAATTAGTAGAATTACAGGAATGTATTAAGACACTTGAGAGTAGAGGGAGGGAAGCTTTCTTAAGTACAATAAAAGAGACGGAGGACAAACTAGAAGCTGAACGAAAagctttatttgaaaataagaaAGTAGAACAACAAAAAGCTAAGAAAGAATCTGCTCTCAAGCGGCCGATGGAGTGGTCCGTTGAGATGACACAACTTTTAATAAAAGCCGTTAACTTATTCCCGGCCGGGACGAACCAGAGATGGGAAGTGGTAGCCAACTTTTTAAATCAACACGGCACATTCACCGACGAAAGGAGGTTCGTGGCAAAAGATGTATTGAACAAAGCAAAAGATTTGCAAAGTTCAGATTTCTCCAAAAGCAGCCTCAAAAAGGCTGCCAATGAGGAGGCTTTCGATCAGTTTgagaaagaaaagaagaagatgCATAACCATATTGATGATACTGGTATTTCAAAAAGTGATAATCCGTCTAAAGCTAAATTAGTGAATGGTACGGCTGCTCCTAAAGCAGAGGAAGTCGTCGCCAAGTCGGACGACCGGCCTTGGACGAAAATCGAACAAGAACTATTAGAGCAGGCGATGAAGACCTACCCTGTGAGCACACCCGAGAGATGGGACAAGATTGCCGAATGCCTACCTAACCGTTCTAAGAAAGACTGTATGAAGCGTTACAAGGAATTAGTGGAATTAGTTAAAGCAAAGAAACAGGCAGCGAACctatcaaaataa
Protein Sequence
MTNSESSANSKVVAIPLPFVKRKVECAGAAFLKYHNIKCHGGDVLFETLQSNEKAEEVIFDDDVEYLRSLDPKDWKMQDHYAVLGMKNLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEEVRSDDDYFTCITKAYEILGTPIKRRSYDSIDHTVDDTVPSQADIKRDGFYKSFVKHFESNARWSEKKNVPLLGDENSSREQVERFYAFWYDFESWREFSYLDEEEKERGQDREERRWIEKQNKVARAKLKKEEMARLRSLVDLAYASDPRIQRFKQEDKDKKLAAKRAKQNAVQAKKAEEERLLKEALLAKQKAEEAERARIEAARAEREQQKKNLRKERKAFRDLCKSNNYYSKNDEENVAHMAAVEKICEMMKLVELQECIKTLESRGREAFLSTIKETEDKLEAERKALFENKKVEQQKAKKESALKRPMEWSVEMTQLLIKAVNLFPAGTNQRWEVVANFLNQHGTFTDERRFVAKDVLNKAKDLQSSDFSKSSLKKAANEEAFDQFEKEKKKMHNHIDDTGISKSDNPSKAKLVNGTAAPKAEEVVAKSDDRPWTKIEQELLEQAMKTYPVSTPERWDKIAECLPNRSKKDCMKRYKELVELVKAKKQAANLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00006232;
90% Identity
iTF_01360570;
80% Identity
-