Basic Information

Insect: Hyphantria cunea
Gene Symbol: -
Assembly: GCA_003709505.1
Location: PKRV01000342.1:183236-201878[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-09 3.1e-06 26.9 0.0 5 40 637 673 633 676 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-09	3.1e-06	26.9	0.0	5	40	637	673	633	676	0.79

Sequence Information

Coding Sequence: atgcCTTCAACTTGTGTTGTGCCATTCTGTTCAGAGAGATCTGGTGGTCATAAGTTTCCACGCGACAAAGAGATCAGAGAAAAGTGGATTGTAGCTATCCGTCGTGTTAATTTTCAACCTTCCGAATActcaaaagtttgtaaaaagcattttaaaaaagaagattacAGATTACCTAAGGAGTCCACAGTGAAATACCCTGcccatgttttaaaaaaagatgcTGTGCCATCAAAATTTTCATGGAATGAAAAGAGTCCTAAGGCCCAGAAAGAAAATAATGGAGagaagaaaatattATTAGGTCAAAGATGCTCAGTATTGCAATGCAAGTCTGGATCTTCAAAGAACATCATACTTCATTCATGTCCGAATCAAGAAAGTATTAGAAAGAAATGGGCTGAAGTCTTCAAAGTAAATCGGGAAGTTGTTAAAAACATGCTGATCTGCAGTCAGCATTTTCTAAAGACTGATTACTTAAACTCAAAAAATGGAGAGTCtcgaatattaaaacaaaatgctgTCCCCTCCCAGAAACTTCCACGGTCTActagaattataaatttaagaaaaaaagtattgcaTTCAAAGAAAAAACCAATCATTAGACCAAAGGCTCATAAAAGGACCGAGAAAATGAAGGAAGTGGTGGATGAGGAATCAAATGTAAATCAAAAGGAGGAGATTCATGAATGCCGTGCTTGTTTAAAGAAGATGGAGAATAATGCAagtatatgtaacatatttcaAAGTTGGGTTCCGCCTTGGGCCGGTATGGAAGCAACAATAGCAGAGGATCTAGTGAAATTAGCGAAAGTTGAGGTATTTGAAACTGACCAACACTCCAAAATAATATGCCAACCATGTTACTCTAAGCTACTTGAAGCGTCATCATTTGTTGCCAAAGTTAAGTATAGTGACCAAATACTAAAACAGCGGTATGCTACAGTACAAGAAAACACAGAAAAGGTATGGCCGAAACCGATACAAGTAGACAAAAATGTCAATAGCAACGTTTACCAAGATATGGATGTAGAAATAAAACAGGAAATTGCTTCCGATGATGAGTACTGTCCGTCTGCAACTGAGAATTTGTATGCTCCAGAAAACAATGAGTACTGTCCAGTTCCAACAGAAATTTCATATCCTCCAGTAAATAATGATGCGGAATTAGGCCATTTGGATATAAAACTTGAACCTGAAGATATTGTTGATCCGTTTGTTGAACTTCCACCATATGAGGATGGTGCGCCTTATGGTGATCCACCACCCTTAACAATAACTATTAATGGTACTATGTCTCTTAAATCACCAAATggagaaaataaaacattgttaaatgGAACAGATGATTACGAAGCAATTATTACGGATAGCACACAGAACACAGGCCTGTTTAATGGAAATGAGAGCAATTATAATGAACAGtataaTCAAGTTGCAGTGAAGGAAGAGCCAAAGAGTGAAGAAGAAGACTCGGAACAAGACTGTGAAATGTCGCTCGACTGCTTATTGTGTACGAAGTCCTTCAACAGTGTTACTGGACTTAAgGCTCATGTGATAGCTCAACATTCCTACAAGTCGGTTAAAAGAAAGATGGCCGGCGCCGAGTCACCTCAAAAGAAAGCCAATGTTGAATATCGATGTCAGATCTGTAGAagagCATTTGTGACGTCAACGGACTTAATGGTACACGAGACTTGTCACAATAAGCACTCTTGCTACGGTTGCTCAAGAAAATTCGACACATTCAAACAGTTGTCAAAACACCGTAAGCGTTGCACTTTGCCAGTGAACAAGACTGCCATCAAACCAAAGACACTTGATGATGTTAAAAGCAAAAGAACGCTGTACATGAATGGACATATAAGAAAATACGGAACACGATCCAACTACACTCAGCAGACATTAGAAGAAGTGCTAAAGAATATTAAATCCGGCGAAATGTCGATGGCTTCTGCGGTTAAAATATACGGAATCCCTAAGAGCACGTTGGCTTATAAGTTGAAACGGAAGCATGACAAAAAGATTGGCAAACCGACTATCTTCTCGGACATAGAAGAGAATATGTTCGTCCAACATATACTGGCTCAGACTGAGAACGCTATGCCAATGAGCCTGGTAGAATTCCGTTTAAGTGTAAGGGACTATTTGAATCAGAACGAGAGAATTATATCTACATTCACGGATAATATGCCAGGGGATGGGTGGGGGATCGCTTTCCTTGATAGACATCCGATTATAAGGGATAGATTAATTCGAAAAGTGAATGTTTAA
Protein Sequence: MPSTCVVPFCSERSGGHKFPRDKEIREKWIVAIRRVNFQPSEYSKVCKKHFKKEDYRLPKESTVKYPAHVLKKDAVPSKFSWNEKSPKAQKENNGEKKILLGQRCSVLQCKSGSSKNIILHSCPNQESIRKKWAEVFKVNREVVKNMLICSQHFLKTDYLNSKNGESRILKQNAVPSQKLPRSTRIINLRKKVLHSKKKPIIRPKAHKRTEKMKEVVDEESNVNQKEEIHECRACLKKMENNASICNIFQSWVPPWAGMEATIAEDLVKLAKVEVFETDQHSKIICQPCYSKLLEASSFVAKVKYSDQILKQRYATVQENTEKVWPKPIQVDKNVNSNVYQDMDVEIKQEIASDDEYCPSATENLYAPENNEYCPVPTEISYPPVNNDAELGHLDIKLEPEDIVDPFVELPPYEDGAPYGDPPPLTITINGTMSLKSPNGENKTLLNGTDDYEAIITDSTQNTGLFNGNESNYNEQYNQVAVKEEPKSEEEDSEQDCEMSLDCLLCTKSFNSVTGLKAHVIAQHSYKSVKRKMAGAESPQKKANVEYRCQICRRAFVTSTDLMVHETCHNKHSCYGCSRKFDTFKQLSKHRKRCTLPVNKTAIKPKTLDDVKSKRTLYMNGHIRKYGTRSNYTQQTLEEVLKNIKSGEMSMASAVKIYGIPKSTLAYKLKRKHDKKIGKPTIFSDIEENMFVQHILAQTENAMPMSLVEFRLSVRDYLNQNERIISTFTDNMPGDGWGIAFLDRHPIIRDRLIRKVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00823575;
90% Identity: iTF_01360678;
80% Identity: iTF_00823951; iTF_00824346;