Hcun003682.1
Basic Information
- Insect
- Hyphantria cunea
- Gene Symbol
- retn
- Assembly
- GCA_003709505.1
- Location
- PKRV01002753.1:1983765-2046488[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 8.7e+03 -2.8 0.0 5 20 9 24 7 51 0.55 2 2 4.4e-26 9.1e-23 80.5 0.0 2 89 201 286 200 286 0.96
Sequence Information
- Coding Sequence
- ATGGATCCACATTTTCCAACGGAATACTGGAAGTGCATGCAGGCGTACATGGAAGAAAAGACTGAGAGCCATCAGTCCTCGCAAGGACCAAGCACCGAGCAAGGGGTAACTCCGGTCGATCACCTACCGATGGCCTCAAATAGTGAAGTTCCTCGTCAGGACCTGGGCAATGAGCCCTCTACCATTAGAGCACCTGATCAGATCCCGGGGAGTGATCAGATGCCTCAGGCCTCAACCTACGAAATATCTGATCAGAGCCCGAGCTATGTTCGAAATCATGATTCTTCCCAACCATCTATTAGCAGAGCACCTGATCAAGTCCCAATTTATTCTACATTTAATCGGTCCTCGACCTATGAAGACCCGGTCTACTTGACGTCACCACAGCCCTCGACCAGCAGGGAATCTCGTCGCGCCTCGCGCTGTAGAACTCCTCCTAAACGCGCAAGAAGTTCAGGAGAAAGCTTGGCAAGTAACGACAAAAGACCTCCTAGGAGCTTATCAGAGAGCTCCATTGGAAAGTCTCCTGGCAGGAAAAAAATGCAGAGTTTCTTTGATGTCGATAAGAAAAAGCTATATGAGATCAGTGACGATCCTCATAGAAAGGAATTTCTCGATGACCTCTTCTCCTTCATGCAAAGACGAGGTTCACCAATCAATCGCTTGCCAATAATGGCTAAGTCTGTGCTGGACTTGTACGAGTTGTACAATTTGGTGACTGCTCGCGGAGGCTTAGTGGAAGTCATCAACAAAAAACTGTGGCAAGAGATCATCAAAGGTCTTAAATTACCGTCTAGTATAACCTCGGCGGCTTTTACACTACGTACTCAatacatgaaatatttgtatgactacgagtgtgaaaaaaataaattttctgcgCGATCCGAACTGGATGCTGCAATCGAAGGGAACAAGCGTGAAGGGAGGCGTACTTCCGCCCAATATGAGTCGCAAACAGCAGCCTTGCGTATGCTATTGCAGCACCCATCCCGTGGTTTATCCGCCACGCTAGCACAACTCTCGCATCATATGCAGCCTCTTCAGATGCCCATCGGTACACGTATGCCAATGCCACTACCACAGGCGACACCAGAAATGGAATTCCGATTTCGCGAGTACTTGAAAATAGTGCAACTACAGAGAGAGCAGCTAATGCAGAATGGTACTGAATCACAACCGGGTTTGAACTTGAGTGGACAAGCGCCAATGCTATCACAACGCGAAGCTGCGCTCAACGCCATGGATATTTCCACACACTTCACGCTATGGAATCTTTATGGCAATCGTAATGGGGTACATATACCACCGCTGGCTGATTTCGAGCCACAACGTGAGGCATTGAACTTGAGCGATAGTCCCCGCTCTAGTTCTTCAGGAGGAAAGCGCGAGGCCTCTCAAAGTTCTCCACCTCCACCGGCGAAGAGAACTCGCGTAAAATCGAGGTCACCGCCGTGCACCACCACGCCTTCGCCAGCATTACCTGAGGTGTCACCTATGGCGCACTCAACTGCACTCCATACTCTCTCTCCACCATTTAACGGCCCGTCAACGTCACATGCGTTTAATGGTCCTTCGATATCGAACGACTTTAATGGAGCTTCGACATCCCACACCTTAAATGGTCCATCTACAGCACACGCTTACAATGGAGCATCAACTTCTAATTCGTTTAACGGTCCTGCTTCCAATGGAACTAACGGAGCCAACTTTAGGATTACCACAAGAGGTGATGCCACCACCGGGAACCAACAATTGGAGGTGAAAATGGAAATTAACGGTGTCACATACGAAGGTGTTCTCTTTCCTTCTAAGGACGCGAATAATTGCAATGGGCATATATCGCCATAA
- Protein Sequence
- MDPHFPTEYWKCMQAYMEEKTESHQSSQGPSTEQGVTPVDHLPMASNSEVPRQDLGNEPSTIRAPDQIPGSDQMPQASTYEISDQSPSYVRNHDSSQPSISRAPDQVPIYSTFNRSSTYEDPVYLTSPQPSTSRESRRASRCRTPPKRARSSGESLASNDKRPPRSLSESSIGKSPGRKKMQSFFDVDKKKLYEISDDPHRKEFLDDLFSFMQRRGSPINRLPIMAKSVLDLYELYNLVTARGGLVEVINKKLWQEIIKGLKLPSSITSAAFTLRTQYMKYLYDYECEKNKFSARSELDAAIEGNKREGRRTSAQYESQTAALRMLLQHPSRGLSATLAQLSHHMQPLQMPIGTRMPMPLPQATPEMEFRFREYLKIVQLQREQLMQNGTESQPGLNLSGQAPMLSQREAALNAMDISTHFTLWNLYGNRNGVHIPPLADFEPQREALNLSDSPRSSSSGGKREASQSSPPPPAKRTRVKSRSPPCTTTPSPALPEVSPMAHSTALHTLSPPFNGPSTSHAFNGPSISNDFNGASTSHTLNGPSTAHAYNGASTSNSFNGPASNGTNGANFRITTRGDATTGNQQLEVKMEINGVTYEGVLFPSKDANNCNGHISP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -