Basic Information

Insect: Hypercompe scribonia
Gene Symbol: -
Assembly: GCA_949316085.1
Location: OX438996.1:7864032-7894952[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 1.2e+02 4.5 0.7 2 23 489 510 488 510 0.84

2 16 0.0076 0.81 11.3 0.0 1 23 520 543 520 543 0.95

3 16 0.37 39 6.0 1.7 1 21 666 686 666 687 0.93

4 16 0.041 4.4 9.0 3.8 2 23 748 769 747 769 0.95

5 16 2.2 2.3e+02 3.6 1.5 1 23 781 805 781 805 0.86

6 16 0.00015 0.016 16.7 0.3 2 23 812 835 811 835 0.97

7 16 0.08 8.6 8.1 0.2 1 23 841 863 841 863 0.93

8 16 0.0039 0.42 12.2 2.9 1 23 869 891 869 891 0.98

9 16 0.16 17 7.1 0.1 2 20 902 920 902 922 0.91

10 16 0.0016 0.17 13.4 1.8 1 23 1058 1081 1058 1081 0.95

11 16 0.0015 0.16 13.5 0.9 1 23 1088 1111 1088 1111 0.98

12 16 0.016 1.7 10.3 0.2 2 23 1133 1155 1132 1155 0.96

13 16 0.004 0.42 12.2 2.0 3 23 1181 1202 1180 1202 0.95

14 16 0.0011 0.12 13.9 0.3 1 23 1216 1238 1216 1238 0.96

15 16 0.00014 0.015 16.8 0.1 1 23 1244 1266 1244 1266 0.97

16 16 0.00044 0.047 15.2 0.7 3 23 1274 1295 1272 1295 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	1.2e+02	4.5	0.7	2	23	489	510	488	510	0.84
2	16	0.0076	0.81	11.3	0.0	1	23	520	543	520	543	0.95
3	16	0.37	39	6.0	1.7	1	21	666	686	666	687	0.93
4	16	0.041	4.4	9.0	3.8	2	23	748	769	747	769	0.95
5	16	2.2	2.3e+02	3.6	1.5	1	23	781	805	781	805	0.86
6	16	0.00015	0.016	16.7	0.3	2	23	812	835	811	835	0.97
7	16	0.08	8.6	8.1	0.2	1	23	841	863	841	863	0.93
8	16	0.0039	0.42	12.2	2.9	1	23	869	891	869	891	0.98
9	16	0.16	17	7.1	0.1	2	20	902	920	902	922	0.91
10	16	0.0016	0.17	13.4	1.8	1	23	1058	1081	1058	1081	0.95
11	16	0.0015	0.16	13.5	0.9	1	23	1088	1111	1088	1111	0.98
12	16	0.016	1.7	10.3	0.2	2	23	1133	1155	1132	1155	0.96
13	16	0.004	0.42	12.2	2.0	3	23	1181	1202	1180	1202	0.95
14	16	0.0011	0.12	13.9	0.3	1	23	1216	1238	1216	1238	0.96
15	16	0.00014	0.015	16.8	0.1	1	23	1244	1266	1244	1266	0.97
16	16	0.00044	0.047	15.2	0.7	3	23	1274	1295	1272	1295	0.95

Sequence Information

Coding Sequence: ATGACAGAAGCCCAGCCGCCAGTTATTCTATGCCTGGAGAGTGCTACTGGCGAGGATGTAACCCTTAAGATTGAGCCTGATGACAGTTTTCAGACATTCCTTGAAAAGGCCAAATCTGTACTGGGTTTTGAAATAGACGTAAACTCCATAACTAGGAACCAACCAGTAACCCTCACAGATAACGTATACCAGTTCTTGATAAATAACGAACAGACCATGCAACCGGAAGGCTTATCACAAACATTGGATCCAATGTTAAGCACCAACGATGGCGCTGAGGCCAATGATCTTGTATACATACTCGATGACGGTACTCAAATAAGAGCATCTCAAATACATTTCGACAATGATGATCCACTGATAGACTTAACAGCAGAAAAGATACCATTTGTGAAATACGCTGACGTCACCGATGATATAGAGATTGACAATCTCACAGTTGAAGAAACTAAGAAAATTAACATTGTTGAAAGCCCAGTATCAAGGTGGTCCAGTAAAAATTCCAGCCCAAAATGCAGTTTCGTCAATTCTTTACCGTTCAAACTCGTATGTAACAACACTTCAGGTTTCGAAGCCcagtttactaaatatttagaaGCTAATACAGCTAAAACTTATGCGACTTTGAACCCTGTGACTATCAGAAATAAATCTCCAAAGAGCttaattaaagataattttaaaaattacgatacTTATCAAAGAAGTGACAGCCTCTCATACACTAGAGAAGATATTCTCAATATGTTCAAAGATTCTCCTATGACGTCACTTCCTTATGATCAGGGTTACAGTGAAAGACGGCATGTGAGGAAAACGGATCCATCAAGACTCGTCCATAAAAGTTGGAATAAACCGATGACTTACGTAGATATTGATGGAGTTTTGATTGGAGAGAGTGAAAGCCAGATTTGTTTTATCTGTGGTAAACATGTTGACAACAGTGTAGACaagctttatttatttgataacgaAGACCAGAGGGTACATAGATGCTCACCTCAGAAGAAAATGTCTACGCAACTGAAAATTATATGCGAATGTTGTTTGAACGAAAATTTTAGACCATGCCGAATGAAAAGTGCTAATCAATTTTTGAATCCCGACGAATTCTTGGTTATCAGAAACAATcaacaatatatatttcagaAGATAAAAAACTTTAGTTTCACACATTACGGTAGAAAAGATATAAAAGAAACTAGACAAAATAAAGAAGAGTTCGTCAAAGTTGAAATTGGTTCTGATGGAGAGATCATCACTAAACCCATAGACAATGATCTCAGGTCTGATGACATTATCATAGTCAAAGATGAGAAGAAAGATAGTAGTTCCagtgatgtagaaataattgAGCCAGAACCAGAGATTGATAGCATCATAGACAATTTGGAGGAAGCTGATGAAGAGGTGAAAGAGTTTTTGGGGAAATACTCTTGTGATACGAATGAAGTTGCCGAACTTAAATGCAGGTTCTGTGACAAAATATTCGCTGATGTCGTTGAAGTGATGGAACATTGTGAAACACATAAACATGACTTGGAAGAAGGCGAAGTCTTTCCATGCCCGCTTTGTAATTatgGTTATGCCAATTTAAAATGGCTGAAGGGTCATTTAAAAGCAGCTCATGAAAGGAATAAAACTACTGAAGAAGACAAAATGAAGGATGATAAAAATGaaaccGAACCTTCAACTTCTTCCAAAGTAAATTCACCTATAGCAAAACGAACTCGGAGTTCTAACAGGAAAAGTGATGAAGAGAGAAAAGAAATCGAGACGTCAGACGATGTAAAGACTGACACAAATGTCGCCCCGagCAAACACAAGCCACCCATCATAAAAACAGAAGTAAAACAAGAAGCGCTGGACAGCAGCGAGGATGAAATTTGGATAGTGCAGACTGCCGACATGGAGACCAACCAGGATCTGGAGAAGCTGTTGGTAGCCAACAATAAGGGCTCTAAGGATCAGCAGGCCCCTAAATCTGAGAAGACATTCAAATGCATTAATTGCAGTCAAATCTTCACAACTGCCGAGAGTTTGTCTTCCCATCGATGTAAACGAAGAGGCAGAAAGCGTAAAGCGAAAGATGAAAATGTTATATGCATACCTACTGAAGAGGATTTTTTAAAGAGGGCCCAAGGACGTCCTAGACCCCCAACAACAGGAGATAATGATTTATTGGTGATTCGTTCACGAAAACGTCGCAACAAACAGCCAACATGGAACCCTCAGATCGTCACCTGTCACAATTGTAACGAATCTTTTACTTCTAAAGTACGACTCAAATTTCATATGCAGTTCCACGAAAGCTCAAACACCATGTTGTCAGATGGAAGATATTTATGTACAGAATGTACTGGGACCACCTTCTCCACGGAGACAGAGCTGTTCGACCACGTACACTTCCAGCACGACAAACAGAAGAGGTGGCAGTGTCCCGTCGAGGGCTGTGGAAAGACTTTCTTCTTAAGGGCAACCCTGACAAAACATAGTCGCACTCACACAGACACACGTCGGTATGTTTGTGTGACATGCGGTAAACGATTCCTGGATAAACAGACTTTGGATGAACACGGAGTCACTCATCTCCAGATCAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGTCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGCGCGTGTGCGCCGTGTGCAAGCGCGCCTTCCGCGACGCGCGCCACGCCCAGGAACACACCGCAAAATCGACTGAATGCATAGAGGCGTACGCGAACGAGCTGAAGGAAGAGACGGAAGAGATGACGGTCCAGCTATCCCCCACCAGTGGGCTTGTTAGACACACCGTGCAAATAGTTGAGTCTCCGAAGCTTTCAAAACCAATCAAACGCCAAGTGTCGAATGATGTGGGGGAGCCACTGCTGTCACAGTTAGCTGATGAAGCACGAGCGTTGATAAGAGTGGTGGAGATTGAGAAGGCTTTCAGATGCGAGTACTGCGAAGAgtGTACAACCCACAAAACGACTCATGGCTTTTACAAGCGTTCGTTGGCTGATGCTAAGAAGCAAGCTGACGGTTCTACACAAAAAGATACGGAGCCACCTTCTGCTACTGGCATCCTGGGATACGGAGACTTTCCAGTCGTTAAACACTTCTTATGCGAGGACTGCGGCCGTTCCTACCTCCACTGGACGTATCTTCAAGTGCATCGTCGTATGAAACACGCCAACGAGAATTTCTTATACAAGTGCAATCAATGTGAAATGACCTTTCCTAATAGTTGGAGTATGGCATATCACCGGAAAAAAGTTCATGGCAAAACTGGACCTGATGACCCTGGGACTAGCAATAAAACTGCCAGAGAAGATTATAGgataccATGTCGAGATTGTGAAGAAGTCTTACCAAATAAGACAGCGTTATACAAACATAGGAAGAAAGAACACAGTGATGGTAACGTATCTGCAGCGAGGGCCAATAATATGCAAGGCACATTTAGCGGAGAGAGAATATCAAATGCGTGTATGCATTGTCCGGCCACTTTCACACACGCACCGGACTTGCACAAGCATATTAAGGAGGTGCACAAGCAGGAGGGCGGTGGTGGTGCGGGCTGGGCGCGGCCGCACGCGTGCCCGGTGTGCGCGCGCGCCTTCCGCACCGCGTCCATGCGCAACGAGCACCTGCGCGTGCACACGGGCGAGCGGCCCTTCCCCTGCGACGTGTGCGGCGTCGCCTTCCGCCGGTCCACAGCGATGCGAAACCACCGCCTCATCCACAGTGGTGTAAGGGCGTGGGCTTGCGGCAGATGTCCCAAACGTTTCAGGATCCGATCTGACCTGAGGACACACCTACGTCTTAAACACCCGGCTACACTACTTGTATTCGAAATGGAAGGCCTGAACCCGTCCCCAGATGACGTTATGAAACACCTCGCGATGCACAATATTTCACACGACAAGGTTATCGAAATAACTAAGATTTCCTTCGCTAAGGGCACGTCGGGCGTGGTGCCCGACAGTGCGCGTGCGCTGGGCGCGCTGCGCGACGTGCCGCGCGCGCACGTCGCGTGCGCCCGGCCCGCACCCGCACCCGCACCCGCACCCGCACCACTACACAACACGCTGGATGAATTCCAACCAGCTCGCCGTGGGAGGGGCATAGCGAAGAACCCTCGACGGCCCAAGATACTGCAGCGGGGCATGTGCTCACAGCAAGAGTCCTCTGCCTACCCACTCGCTGTTAACGTTGGAGGGGAGGAGATACCGGAACTCAATCTTCAGCTGCTACTGAGGGACGGGGTCCTTGTCAATGGTAACCAAATGGTGCAACTACAGCTGGACGACCCTATGTTGTTGGAGTAA
Protein Sequence: MTEAQPPVILCLESATGEDVTLKIEPDDSFQTFLEKAKSVLGFEIDVNSITRNQPVTLTDNVYQFLINNEQTMQPEGLSQTLDPMLSTNDGAEANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADVTDDIEIDNLTVEETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTAKTYATLNPVTIRNKSPKSLIKDNFKNYDTYQRSDSLSYTREDILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPMTYVDIDGVLIGESESQICFICGKHVDNSVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICECCLNENFRPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFSFTHYGRKDIKETRQNKEEFVKVEIGSDGEIITKPIDNDLRSDDIIIVKDEKKDSSSSDVEIIEPEPEIDSIIDNLEEADEEVKEFLGKYSCDTNEVAELKCRFCDKIFADVVEVMEHCETHKHDLEEGEVFPCPLCNYGYANLKWLKGHLKAAHERNKTTEEDKMKDDKNETEPSTSSKVNSPIAKRTRSSNRKSDEERKEIETSDDVKTDTNVAPSKHKPPIIKTEVKQEALDSSEDEIWIVQTADMETNQDLEKLLVANNKGSKDQQAPKSEKTFKCINCSQIFTTAESLSSHRCKRRGRKRKAKDENVICIPTEEDFLKRAQGRPRPPTTGDNDLLVIRSRKRRNKQPTWNPQIVTCHNCNESFTSKVRLKFHMQFHESSNTMLSDGRYLCTECTGTTFSTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCKRAFRDARHAQEHTAKSTECIEAYANELKEETEEMTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNDVGEPLLSQLADEARALIRVVEIEKAFRCEYCEECTTHKTTHGFYKRSLADAKKQADGSTQKDTEPPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCEMTFPNSWSMAYHRKKVHGKTGPDDPGTSNKTAREDYRIPCRDCEEVLPNKTALYKHRKKEHSDGNVSAARANNMQGTFSGERISNACMHCPATFTHAPDLHKHIKEVHKQEGGGGAGWARPHACPVCARAFRTASMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWACGRCPKRFRIRSDLRTHLRLKHPATLLVFEMEGLNPSPDDVMKHLAMHNISHDKVIEITKISFAKGTSGVVPDSARALGALRDVPRAHVACARPAPAPAPAPAPLHNTLDEFQPARRGRGIAKNPRRPKILQRGMCSQQESSAYPLAVNVGGEEIPELNLQLLLRDGVLVNGNQMVQLQLDDPMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502366;
90% Identity: -
80% Identity: -