Hscr029587.1
Basic Information
- Insect
- Hypercompe scribonia
- Gene Symbol
- clz9
- Assembly
- GCA_949316085.1
- Location
- OX438991.1:6934451-6936562[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 3.9e-05 24.3 0.0 1 37 16 53 16 60 0.91
Sequence Information
- Coding Sequence
- atGCCGCGAATATACGTAAAGAAGGGGACAAGAACGGGAGAGGTAGACGAGGACGCGATGAGAACAGCAATAAAGGATGTATTAGACAAAAAACTATCAATAAGAAAATCTGCAATAACATATGGCGTTAAACCGACAACACTTTCAAcacgtttaattaatttacgtaaAAAAACTGAATCCATTCAAAACGAAACAATTCCAGCGCGTATTTTCACTTCAAAGTTCACATCAAATCAAGTGTTCACGGTCGACGAAGAGTCTCTTTTAAACAAGTCCATAACAGACTGTTGTAAAATGCACTACGGTTTAACGTTGGTCCAACTAAGAAAACTAGCATACGAATTTGCGAaagctaatataataaaatatccgTCTTCTTGGGATCACAACAAGATGGCTGGGAAAGATTGGGTCGACAGTTTCCGCAGGAAGAATGTAAACTTGAGCTTAAGAAAGCCCGAAAATACGAGTGCTGCGAGATCTTTTGGATTTAACAAGACGGCGGTGACTCAATTTTTTGAAAACCTAGAAAAAGTTCTGAGGAAGCATGGACTTACTGCAGATCGTATTTATAATTTCGACGAGACGGGGATATCCACAGTTTTGAGTACGCCTAGGGTATTGGCTGagaaaaaccaaaaacaaataGGCCAGCTTGTGTCAGCAGAAAGAGGTGAACTTGTCACCTTTGGTGGGATTATTTCAGCCAGTGGTAACACGATCGCCCCACTGTTTGTTTTCCCTAGAGTGCATTTGAAAAATCACTTTATGCAGGGTGCTCCTGAAGGAAGTTTAGGAGTTGCAACAAAGAGTGGTTGGATCaattctgtaatatttttagagGTATTgaaacatatacaaaaaaagacaTCATGCACCAAAGAAAACCCCATTTTGCTTTTAGTTGACAACCACGAGAGTCACGTTTCTATTGAAGCAGTAGACTACGCTCGTGAAAACGGTATTGTTTATCTTTCATTCCCACCACATACAACACACCGTCTTCAACCTTTAGATGTGGGAATATTTGGACCTTTTAAGGCCAAGTTAAAGACTGCTTTTAACGATTGGCATGTAAATAATGTAggaaaaactataaatatttacaatataccgCAGATCGCTAAAATTGCCTATTTTGAgtcatttaataataagaacATTACAAAAGCGTTTGAAACTACCGGAATATGGCCCTTCAATAAACTGATTTTCAGTGACGATGATTTTGCTCCCTTGCAAGTTTACCAGTCAGATGCTGTACCAAGCTCGGATGTCAACACAAGTTTTGTGCAACAATATGTTTCTGAACATCCAGAATACCAAGATCTGCTGGATTCTACTCAGCAGGATATTCAAAGATCAGCGACTACATCACCTTCAATCCTCTCTCAGCCGCTGCAAATCGGTGCACCATCAACATCAGCTACAGTATCTTTAGTATCACCAGAAATGGTCCGACCCTACCCTAAATTGGATAGGAAAACCACACAAAAACCAAAGAAAGGAAAGCTACTCGGCAAGTCACGAATATACACAGATACCCTAGAGAAAATTAGGCTAGAAGAACTGGAAAAAACAAAGGAATTAAAAAagcaagaaaaagaaagaaagcagAGGGCTAAGGAGATGAAGCGTGCATTAAATTTACTAGGGGaaacaaataaaaccaaaataaagCCAAAGAGACTTAAGAAATCTGTGGAGAAATTTGTGGAGACAGATAGTGATGATGAGACTAATATAAGTTTAAGAGAGAGTTCAGCTTCTCCCATCACAGAAGCATCTGATATTGAAAACGAAGCGCCAATTTTGACAgaagatataaaagaaaaatgttttgtactTGTCAAATTTGAGAAGAAAAAGACTGTTTTACACTATAAATTCGTTTTCCCCAATACTAAAGACGAGGGAACAGTAGAAGTATCAGATGTAGTCTGTATACTGATACCATCCAAAACTGCTGCTACTGTACGAACGGCTGATATTTTTAGCTTTTCGAAAGATCTGTCTATGTACAATGTGCAATGA
- Protein Sequence
- MPRIYVKKGTRTGEVDEDAMRTAIKDVLDKKLSIRKSAITYGVKPTTLSTRLINLRKKTESIQNETIPARIFTSKFTSNQVFTVDEESLLNKSITDCCKMHYGLTLVQLRKLAYEFAKANIIKYPSSWDHNKMAGKDWVDSFRRKNVNLSLRKPENTSAARSFGFNKTAVTQFFENLEKVLRKHGLTADRIYNFDETGISTVLSTPRVLAEKNQKQIGQLVSAERGELVTFGGIISASGNTIAPLFVFPRVHLKNHFMQGAPEGSLGVATKSGWINSVIFLEVLKHIQKKTSCTKENPILLLVDNHESHVSIEAVDYARENGIVYLSFPPHTTHRLQPLDVGIFGPFKAKLKTAFNDWHVNNVGKTINIYNIPQIAKIAYFESFNNKNITKAFETTGIWPFNKLIFSDDDFAPLQVYQSDAVPSSDVNTSFVQQYVSEHPEYQDLLDSTQQDIQRSATTSPSILSQPLQIGAPSTSATVSLVSPEMVRPYPKLDRKTTQKPKKGKLLGKSRIYTDTLEKIRLEELEKTKELKKQEKERKQRAKEMKRALNLLGETNKTKIKPKRLKKSVEKFVETDSDDETNISLRESSASPITEASDIENEAPILTEDIKEKCFVLVKFEKKKTVLHYKFVFPNTKDEGTVEVSDVVCILIPSKTAATVRTADIFSFSKDLSMYNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822935;
- 90% Identity
- iTF_00822926;
- 80% Identity
- -