Basic Information

Insect: Hypena proboscidalis
Gene Symbol: -
Assembly: GCA_905147285.1
Location: LR990130.1:16271613-16279342[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 5.8 5.9e+02 2.4 1.5 1 23 54 77 54 77 0.94

2 19 0.058 5.9 8.7 4.2 1 23 84 107 84 107 0.97

3 19 0.12 13 7.6 0.6 2 23 228 249 227 249 0.92

4 19 8 8.2e+02 1.9 3.1 1 23 255 277 255 278 0.94

5 19 0.22 22 6.8 4.9 2 22 516 536 515 536 0.95

6 19 0.1 11 7.9 2.6 1 23 635 657 635 657 0.95

7 19 0.44 45 5.9 0.2 2 23 796 817 795 817 0.96

8 19 0.00063 0.064 14.8 0.7 2 23 893 914 892 914 0.96

9 19 0.084 8.6 8.1 0.2 1 23 922 944 922 944 0.97

10 19 9.4 9.6e+02 1.7 2.2 1 23 978 1000 978 1000 0.92

11 19 0.00029 0.029 15.9 4.0 1 23 1008 1030 1008 1030 0.99

12 19 5.9 6e+02 2.3 5.0 1 23 1115 1137 1115 1137 0.98

13 19 5 5.1e+02 2.6 0.0 2 23 1223 1244 1222 1244 0.95

14 19 0.0075 0.77 11.4 0.8 1 23 1308 1330 1308 1330 0.95

15 19 0.0045 0.46 12.2 1.2 1 23 1336 1358 1336 1358 0.96

16 19 0.0081 0.82 11.4 2.6 1 23 1448 1470 1448 1470 0.97

17 19 5.9e-05 0.0061 18.1 1.2 1 23 1476 1498 1476 1498 0.99

18 19 0.4 41 6.0 2.9 1 23 1588 1610 1588 1610 0.96

19 19 0.021 2.1 10.1 4.9 1 23 1621 1643 1621 1643 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	5.8	5.9e+02	2.4	1.5	1	23	54	77	54	77	0.94
2	19	0.058	5.9	8.7	4.2	1	23	84	107	84	107	0.97
3	19	0.12	13	7.6	0.6	2	23	228	249	227	249	0.92
4	19	8	8.2e+02	1.9	3.1	1	23	255	277	255	278	0.94
5	19	0.22	22	6.8	4.9	2	22	516	536	515	536	0.95
6	19	0.1	11	7.9	2.6	1	23	635	657	635	657	0.95
7	19	0.44	45	5.9	0.2	2	23	796	817	795	817	0.96
8	19	0.00063	0.064	14.8	0.7	2	23	893	914	892	914	0.96
9	19	0.084	8.6	8.1	0.2	1	23	922	944	922	944	0.97
10	19	9.4	9.6e+02	1.7	2.2	1	23	978	1000	978	1000	0.92
11	19	0.00029	0.029	15.9	4.0	1	23	1008	1030	1008	1030	0.99
12	19	5.9	6e+02	2.3	5.0	1	23	1115	1137	1115	1137	0.98
13	19	5	5.1e+02	2.6	0.0	2	23	1223	1244	1222	1244	0.95
14	19	0.0075	0.77	11.4	0.8	1	23	1308	1330	1308	1330	0.95
15	19	0.0045	0.46	12.2	1.2	1	23	1336	1358	1336	1358	0.96
16	19	0.0081	0.82	11.4	2.6	1	23	1448	1470	1448	1470	0.97
17	19	5.9e-05	0.0061	18.1	1.2	1	23	1476	1498	1476	1498	0.99
18	19	0.4	41	6.0	2.9	1	23	1588	1610	1588	1610	0.96
19	19	0.021	2.1	10.1	4.9	1	23	1621	1643	1621	1643	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCCGGGCGCACACATTGGCGAGCTCGCGCCTACCTTCGGTCGCTGCCTTGACGCCCGCCTCTGCGACGTCTCCTCCGAGGGCTCGTCGGACGCGGCGGATGACTTCGAGCTGCCACAGTGCAAGATAAGGAGGAACTACAACTGTACCAAGTGCACGTTCTACACTCAGAATCCGCGCGCTTATCTCGTCCATACGCGCGATACTCACTttgtaaaactaaaaatttacGACTGTCCACACTGTGTTTACGCGTCGAAGCATCATCAAAAACTTGTGCGTCACATCAAAATGGTCCACGAAGACGGGGAAACACAAACACGGAATTCAAAGACGAAGTCGTCATCAAGATTGGACAGTGACTTCGCGATGTCCACACCAGATGTTATCGAGCCAGCTATGAGAATAGAAGACATGGTCGAAGAAGTAGAAGACTACGACGATATGATGATGGAGGTTGAGGAGAGCGCAGACTATGGCCCAGACATCACCGACGACATTGACGTCGTCGGGGAAGCAGCTACGGAACAAGCAGCGCCCTCAAACTTGTCAAAAACAAAAGGAAACGTCAAATTTTTCACATGCGATAAGTGTACCTATGTCACCCACATAAGGGCTAGATTCACTAAACACGTCAAATATCACTCGATGCCTATGATCAAGTGCATTATGTGCGATTTCCGGACACCATACAAATGGAACTTGGACCGGCACATGAAGAACCACGGAGGAAGTGGGAGTTTTCATTGTTCGATGTGCAACTTCACCGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCACCACACGCCGCCGGTGGGGCACTCGCTGGCGAGCCGGCGCCGCAACCGGGTGGGCGCCAGCGACACGCTGTTCGACGAGGACGCGGTGAACGCGGCGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGAAATGGGTCTACAATACGCTGAGAGAGAATTAGTCAATTGTAAAAGTGACTCGAATGATGGCACTCCCTCCGACGCCATCGACAAAAGAGACGGCCAGCACTCACCGAGTCACAGCTCTGATGAGTCCAAGAAGCAGAACAGAAAAATACCTCGGCCGATACCACAACTCATACCGCTCAATTCCTCAACCCCCAACCAGAAACAAACTACTGTTGGCGAACCACCACAGAAAAAGTTCAAAGAATCTTCACCTGTCGATCTAATAGACCCAGAATTAGGAAGCAAACTTGAAAATCTACCTGTTGATATCACTTTGATTCCAGTCAATAACAATCCGTCTGCGAAGGAAAGTAGCGGTCGTAAGCCAAATATCTCATTTTTTGATCGCCTAAAAGAACGACTATTAACCGAAACTGGAGAAAAAGGATCCCTAATTTGCAAAAATTGCGGATTCGAGAGCAAATGTTTATCAGAACACTCGGTTCATGAGAAAAATTGCATGCCACAAATTAACAAAATCAATACGAATACAAATGCAACGCTTTCTAGTTTAAGTTCAACACGGTGTCAACATTGCAGACATAGATGTAAATCTAGTGCAGACTTGTATATCCACATGCAAACATGCGGCAAGAAAAAGAAGTCTGCAAGCGAAAATAACTCAGAAATCAAAAATGATGATAGTAATGACACATCCAATCCCAATCAAGAGAAAGAGGCCGAGAGGCATCCCATGGAAAATGTCGTTTTCGTCTGGAACAATATCAACCAAGACAATAACAAGTTTGATGTACCATTAGATATTAATATAAACGACGACTCAACCCTTCCAGAAGCTCACAGAAACTTTGACATCGAGATCGTAGATGAAAATGAAACAATGAATTTATCTCCGAGTCAAGCTGTTGGAAGGAAAGTGTTTAAATGTCCACACTGTCCATTTTTTTCAACCACAGCGTCGAGATTTCACGTTCATATTGTTGGCCACTTGAACAAGAAACCATTTGAATGTTCTCTTTGTAAATACAAATCTAATTGGAGATGGGATATCACAAAACATATTAAGCTTAAGTCTGCAAGAGATCCAGAACACAACGAAGCGAAAGTGCTAATGACGGACGAAACAGGGAGAAGAAATTACAGCAAATACAATAAGTTCTTGGCAATGCCTGTATTGAACGAATACGGAGAAAATGAATTTCACTATTTGGATTCTAATACATCGGTCGATAGCGCGATGGAATTGGATGAGTCATTCCAGGATGGGTCTGACGCAATGAACAGTCAATATGAAATGCAGCCACTAAACCTGCAGACTCAACACATTGACGATACCTACGACATGCTTGACAACAGGGCTCTGAATATGAGTGACTTAAAGAAACCCAAGAAAACGCTGTGGAAAtgtaaaaaatgcaattacAAAGATCCATCAAAGGAAGCCCTCATTGAACACGTTCGTGAACATTCGAGGGACGGTGTTCTAGAAGAGCCACCTAAGCCTACTCCCAAGAAATCTGAGAACACTCCCGACCCGGCGGATCTGGCGTACCGTTGTGGTCACTGCCACCAATTATCTAATTGGAAACATGTCATACAGcGTCACTGTCGGTTGAAGCACGACggaataataaaagtaatcacCACGGTGAAACCAAAACCTGACCCAGTGAATATAAACGACATCAACGACACCTGTAATAAGTGTCCCTACAGAACAAGCGACAAGAAACAACTCATTGCTCATCTACAACAACACCAGCCTTCATCGCAATCTATATTTAAGTGCTACTTTTGCCCTTACTTCGTAAAAGATGAACCAGAATTAGCCCAGCATCTTCTTCTACACGGCATAACTGAACCAGAAGATTATATCTCAAAGAACATGGGCGGTAAATCTCCCTTACGAGATCTCCAATCAATGACAACGATGTGCCCAACCAAACGACACAGGTGCATTGAATGTCCGTACGAAACGAACAGCAAGTCCCAATACATGTATCACGAACAATTCCACCGCACACCAGCCGATACACCTTACAAATGTCCAGAGTGCAACTATAGCGTTTCTAAGAGACATCTATTACACCAACATTTAAGAGTCCACGGAATAATCACGAAAAGACTTGATGCGGAATACGGATTGGACCAGCCATCGACATCGTCACAAAATAAATCTGACAAAGATTCGCAATCTAACTTCTTAGAAGAAATTCCTTATGTCTGGGTCTCCGCAAAGAATGAATtccataaaatgtttaaatgccGATATTGCTCATACGTCAATTcccaaaaatgtaaaattccTAACCACGAaaaaattcattttattgtttttgaaaaCAGTGACACCACCATTTACAAGTGCCTTGAATGTAAATTTACATGTGACAATGCCTGTAGATTAGCAGAACACTCTAAATCACACGGCGAAATATATGGTCGCATTTACTGCCCCGTTGAAGACGATATTCCAGATGAAGAACAAATCACTAAACTGAGGAAAGTCATAGAAATGGATAAGGCAAGCAACACAGAAAACATTTCTAAAGAAGAAGGGTCGGCGATTAATGAGAATAGAGAGATAAAGTTGCTATATTTTTGTCACAAGTGTCCAGCTAGATTTTTCGAAGATCAAGTGTTACAAAATCACGATAAGTTTCATGATTCGACATATCCAAACAAATGCAAGTTCTGTGAGTTTTCAGTCCCCGAAGAGAACGAATTGATAGACCACGCAATTGTTCATACAGATGAATATCACACTAAAACAAAGATACTTAAATTCGTTCATAACGCCCATCATTCACACAGACAGCCTCGATTAGAGTTTGTACATTGTCCGACTAGTTCGGAAATCAGATGGATATCTATGGGTCCAAATATCGTCGAGAACATTGAAACTGGTGTAAGAAAAGAGAAACATGtgccaaaacaatatttttgtaaactgtGCCCTGCGAAATTTTTCAAAAGTTCAGCCCTCAACTACCACATGGGATTACATGGAGGTGAAGGTGAACATAAATGTAAGAAATGTAACTATGCCGTGAAGAACATAGGAAACTTAGCTAAACATGAAATGTTACACGACAGTAACAACAAGCCAGCAAATTGTGATTATGAGTCTGGTGACGACATGGACTTCAAAAATATTCCATTATCAGGGACAGATTTGTTCCAGAGGAAGACTGAAGCTCAAAAAAGAGTGTTAACCGAtagtaataaattagttaaGCCAAATGATCACTTTCCGCCTGTTTTACAAGCTGATCCACAATTTGGATATTTGATGCATGGTAATCCTGAATTTATTTATCCCacttatttgaaaaacggccgTCAAAAAGAGAAGCGTTACAAATGCCACAAATGTCCCTCGGCATTTGAGAAACgagaacaatacaaaatacatttatcacTGCATGGATCTAAACAGAGGTATAAATGTGAAATATGTGACTATTCTGTAAAATATTACGCAAACTACGTACAGCATATGAGGAAACATCAAATGAATGATGAAGCACAAGCTGAGAGAAAGAAGGGTAACAGTGATTATACTATTACGGAAAACACAGATATTAAACAAGAGGATAGCACTGAAAACATTAAACTTGCCATCAAAACCATGCCGAGACCTGTTAAAAGCGACTTTCAGCAGTTTTCAATTAGCGACCAGCAAACTCTTCGACTGCTGCAGCGCAGGCGCTCAATGCACAACTGTGCTAACGAAGTTGATTCAACTGAAATAATGCCGACGAAAGAGCGTAAAATGCACATGTGTTTATTGTGTCCTTACACGAACCAACGTCAGGATTCCTTGACTAATCATTACAGAAGACATGGAAATTCTGATGTTCTCATAGCAGGTAATCATAAGTGTTCTTATTGCGATCTGTTTGTGGTGCAGTCGCACTTCCTTCGGGAGCATTTGAAAACGCACTTCAATTACCACAAGACCCTGATCCCTGAATGTTTCGTAGCGAATGAAGAAGTTAGTTTTACGGTAACTAAGTTGGAAGACGAAGGTAGTGAATCTGTTGATCTCAAGTTAGATgtgcaaaacaaaattatcgCGTATAGTgacaaaaaattgtttgttaaaattaagacaGGAGAACTGTTGGTAGAATAG
Protein Sequence: MLQQMSSSPGAHIGELAPTFGRCLDARLCDVSSEGSSDAADDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYDCPHCVYASKHHQKLVRHIKMVHEDGETQTRNSKTKSSSRLDSDFAMSTPDVIEPAMRIEDMVEEVEDYDDMMMEVEESADYGPDITDDIDVVGEAATEQAAPSNLSKTKGNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCIMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPVGHSLASRRRNRVGASDTLFDEDAVNAALPKEEEGSGDSRSSHSVSEMGLQYAERELVNCKSDSNDGTPSDAIDKRDGQHSPSHSSDESKKQNRKIPRPIPQLIPLNSSTPNQKQTTVGEPPQKKFKESSPVDLIDPELGSKLENLPVDITLIPVNNNPSAKESSGRKPNISFFDRLKERLLTETGEKGSLICKNCGFESKCLSEHSVHEKNCMPQINKINTNTNATLSSLSSTRCQHCRHRCKSSADLYIHMQTCGKKKKSASENNSEIKNDDSNDTSNPNQEKEAERHPMENVVFVWNNINQDNNKFDVPLDININDDSTLPEAHRNFDIEIVDENETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNEYGENEFHYLDSNTSVDSAMELDESFQDGSDAMNSQYEMQPLNLQTQHIDDTYDMLDNRALNMSDLKKPKKTLWKCKKCNYKDPSKEALIEHVREHSRDGVLEEPPKPTPKKSENTPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVNINDINDTCNKCPYRTSDKKQLIAHLQQHQPSSQSIFKCYFCPYFVKDEPELAQHLLLHGITEPEDYISKNMGGKSPLRDLQSMTTMCPTKRHRCIECPYETNSKSQYMYHEQFHRTPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDAEYGLDQPSTSSQNKSDKDSQSNFLEEIPYVWVSAKNEFHKMFKCRYCSYVNSQKCKIPNHEKIHFIVFENSDTTIYKCLECKFTCDNACRLAEHSKSHGEIYGRIYCPVEDDIPDEEQITKLRKVIEMDKASNTENISKEEGSAINENREIKLLYFCHKCPARFFEDQVLQNHDKFHDSTYPNKCKFCEFSVPEENELIDHAIVHTDEYHTKTKILKFVHNAHHSHRQPRLEFVHCPTSSEIRWISMGPNIVENIETGVRKEKHVPKQYFCKLCPAKFFKSSALNYHMGLHGGEGEHKCKKCNYAVKNIGNLAKHEMLHDSNNKPANCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDSNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEICDYSVKYYANYVQHMRKHQMNDEAQAERKKGNSDYTITENTDIKQEDSTENIKLAIKTMPRPVKSDFQQFSISDQQTLRLLQRRRSMHNCANEVDSTEIMPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGNSDVLIAGNHKCSYCDLFVVQSHFLREHLKTHFNYHKTLIPECFVANEEVSFTVTKLEDEGSESVDLKLDVQNKIIAYSDKKLFVKIKTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01492517;
90% Identity: -
80% Identity: -