Hpro027939.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- ZNF711
- Assembly
- GCA_905147285.1
- Location
- LR990146.1:13954040-13965125[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.015 1.6 10.5 1.8 2 23 66 87 65 87 0.96 2 12 0.005 0.51 12.0 1.1 3 23 95 116 93 116 0.95 3 12 4.9 5e+02 2.6 1.5 2 23 124 146 123 146 0.89 4 12 1.1e-06 0.00012 23.5 0.8 1 23 152 174 152 174 0.97 5 12 8.7e-05 0.0089 17.5 7.2 1 23 180 202 180 202 0.97 6 12 0.0028 0.29 12.8 2.1 1 21 208 228 208 229 0.94 7 12 0.32 33 6.3 4.8 1 19 247 265 247 270 0.92 8 12 5.1e-05 0.0053 18.3 2.3 1 23 638 660 638 660 0.98 9 12 0.0042 0.43 12.3 6.1 1 23 667 690 667 690 0.97 10 12 0.00011 0.011 17.3 0.3 1 23 698 721 698 721 0.96 11 12 0.0096 0.98 11.1 6.1 1 23 727 751 727 751 0.97 12 12 0.015 1.5 10.5 5.0 1 21 757 777 757 778 0.93
Sequence Information
- Coding Sequence
- ATGGATTCAAACCTACCATATTTCAATTTACCATTCGTAGATTCTGAGCTAAAGCCTCAGGACTCAGTGTACGATGTCCTGAATACTCCTCTACCATCACACAGCGCATTGCTGGCGTCAGATGACGTCCTAGCTCAGTTCCTCTCTGGTGATGAACCGTTAGAAGAACCAGACTTGAATGGTCCTACGACTTTGCACTGTGAGATCTGTAGGAAACAGTTTGATAATGCTAAAAAGTATTACGGACATTTGAGAGTACATTCCAAGGATAATCTCTGGATTTGTGACAAATGTCCAAACCAGAAGTTCTCCACCAAGCAGCAGTTGATGAAGCACACCTTGACGCACAAGCCTCTGGAGTTGATATGGAAATGCCCGCATTGCATCATGGCATTTGAGGCGCTGTGGAAACTGCAGCAGCATCTGTTTCATAAACATTTAGATTATAGACCTTACAAATGTGATGAGTGTGACAAAGCTTTTTACAAGCCTTCTGATTTAAAAAAGCACAAAGATGTACATAATGATATAAAGAAGCACCAATGCAGCTTCTGTGAGCAGTGTTTCAAAGACAAGTCCAACCTGAAGCGCCACGAGCTACGGCACACCAATGAGAAAGCATTCTGCTGTCCTGGATGCAGGAATAGGTTTACTCAGCTGGCATCACTGAGGCGCCACACCCAGAAGTGTCCTTTGATCAAGTTCCCGACGGAGCCGGCGGACAAAACCGTCAGGAAACATTACTGCCGCGTTTGTGGACACAGCTTTCAGTATAAGAGCGCACTGCTAGAACATTGTGTCAGacAACACACGAACAACGCAGCAGAGACATTAAAAGAGGAAAACAACCAAAGCACCGACGCTAACCGCATCGTAGACAACATTGTCGATGACATCCTATCCGCCGAAGACGACTACATGACCATGCCGACACAAAACGAAATACTCAACGTATACAACCCAACCGAAATGGACACCGCCGACAACCTAATGCAAATCGAACTACTAAAGGACATAAACCAGTTCCAGTTACCGTACCAAATACTAGATGAAGAACTGCTCTACAATGATATAGATTTCGACAGCATACAACCAAGCCACATATTCAACACGAATACAAACGATATGGATTACGCACAAGACAAAAACGGAGAAATCCTATTCGACTTTACTGATGGCAATACAGATCAAGATATAATGAGCGCTCTGGCTCATGTAAAAACTGATATAACCGATGAATTGTTGAATCCAGAATTATTACCTAAGGAAAGTGAACTAGCGCCGGTTTCAGTGAACGAATGTGCGACAATATTCGAAAGTGATGTCGATTTAGAAGCTAGTACTAACTTAGCGGCCAATTTGAACCAGCTGATAGGAGAAAATCGTGTTCAGTATATTTATACTGAACATGATGATACATTTATTATACGTCTAAATAGTGAGATTGATGCTGAAAAGCTTACTGATATGTTGAATATTGGAGTTGACATTGTTAATGATAGAGAAAACAATATTAGTGAAACtaaattgaataaagaaatACCTGATCCTACAGTTATTAAAGTAGAGAAGAATAATCAATTAGTTATAGTTAATGATAGAGAAAAGAATATTACTGAAACTGAATTGAATAAAGAAATACCTGATCCTACAGTTATTAAAGTAGAGAAGACTAATCAATTCGATATAGTTAATTATAGAGAAAACAATGTTTCTGAAACTGAATTGAATGAAGAAATGCCTGatcctttatttattaaagtggaAAAGACTAATCAATTCGTTATAGAACCtatgttaaattatattaagccAATAGTGATGAAGATTGAAGAGATTCATAAGCCCGAGGTTAAGAAAGACAATGTGGCACAAGAGAAAAAATCAaaaactaagaaactgttgaagtTATTCGTCTGTAGGACATGCAGTAAAGTTTTCAGCAAGAAGGATAATTATAATTCGCATAGagCTACCCACGAGCCGTCACTCCGCTCTCACAAATGCAGGATCTGCGCTGAACGGTTCAGTTACCGCTCCACCCTCAACAAGCACGTCCAGAAGTGCCACACGCCCGTCGTGTTCCCCGCCCATTCCTGTCCCATGTGCCCGAAGAACTACAAACAAGCGTGGCTCTTGAGAGACCACATAGCCCGGGACCACGACCGCCTGACTCCGTTCACGTGTGACCACGAAGGCTGTGACAAGAAGTTCTACAAGAAATGCGATCTCACCATACATAAAAGGCAGCATACAGGCGAGCGGCCGTTCCAGTGCTGTCAGTGCCCGCGAGCGTTCCAGCACATATCACATCTCCGGAGACACAACAAATCTAAAGGCTGTCTAAAAATAGACACACCTTGTCGTACCTCTTCATCTCTTTTACTTCGCACTCCTCTTCACTACTCCAGTCGTTACGACAACTCTTTTACTATCCAAGCCGTACGGCTGTGGAATTCTCTCCCTCACCACATACGCAACAGCCCCTCTATTGACGTTTTTAGGAGGAGAACAAAGGAGCATTTTCTCTCCATCAACTAG
- Protein Sequence
- MDSNLPYFNLPFVDSELKPQDSVYDVLNTPLPSHSALLASDDVLAQFLSGDEPLEEPDLNGPTTLHCEICRKQFDNAKKYYGHLRVHSKDNLWICDKCPNQKFSTKQQLMKHTLTHKPLELIWKCPHCIMAFEALWKLQQHLFHKHLDYRPYKCDECDKAFYKPSDLKKHKDVHNDIKKHQCSFCEQCFKDKSNLKRHELRHTNEKAFCCPGCRNRFTQLASLRRHTQKCPLIKFPTEPADKTVRKHYCRVCGHSFQYKSALLEHCVRQHTNNAAETLKEENNQSTDANRIVDNIVDDILSAEDDYMTMPTQNEILNVYNPTEMDTADNLMQIELLKDINQFQLPYQILDEELLYNDIDFDSIQPSHIFNTNTNDMDYAQDKNGEILFDFTDGNTDQDIMSALAHVKTDITDELLNPELLPKESELAPVSVNECATIFESDVDLEASTNLAANLNQLIGENRVQYIYTEHDDTFIIRLNSEIDAEKLTDMLNIGVDIVNDRENNISETKLNKEIPDPTVIKVEKNNQLVIVNDREKNITETELNKEIPDPTVIKVEKTNQFDIVNYRENNVSETELNEEMPDPLFIKVEKTNQFVIEPMLNYIKPIVMKIEEIHKPEVKKDNVAQEKKSKTKKLLKLFVCRTCSKVFSKKDNYNSHRATHEPSLRSHKCRICAERFSYRSTLNKHVQKCHTPVVFPAHSCPMCPKNYKQAWLLRDHIARDHDRLTPFTCDHEGCDKKFYKKCDLTIHKRQHTGERPFQCCQCPRAFQHISHLRRHNKSKGCLKIDTPCRTSSSLLLRTPLHYSSRYDNSFTIQAVRLWNSLPHHIRNSPSIDVFRRRTKEHFLSIN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -