Hpro019260.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypena proboscidalis
Gene Symbol
-
Assembly
GCA_905147285.1
Location
LR990139.1:4689487-4707138[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0006 0.062 14.9 3.1 1 23 239 261 239 261 0.97
2 11 0.0022 0.23 13.1 10.2 1 23 267 289 267 289 0.97
3 11 0.00029 0.029 15.9 8.7 1 23 295 317 295 317 0.98
4 11 0.0005 0.051 15.1 1.5 1 23 323 345 323 345 0.97
5 11 6.7e-06 0.00069 21.0 1.0 1 23 351 373 351 373 0.97
6 11 4e-06 0.00041 21.8 0.2 1 23 379 401 379 401 0.98
7 11 8.1e-05 0.0083 17.6 0.4 1 23 406 428 406 428 0.96
8 11 1.1 1.1e+02 4.7 3.2 3 19 436 452 435 458 0.90
9 11 4.1e-05 0.0042 18.6 0.4 1 23 551 573 551 573 0.97
10 11 0.00015 0.015 16.8 1.4 1 23 640 662 640 662 0.96
11 11 4.2e-05 0.0043 18.5 4.3 1 23 672 694 672 694 0.97

Sequence Information

Coding Sequence
ATGTGTATGCCAACTCCAAATAATGTTTCGGGCTTCGGTTACTCGTGGGGCTTCACGAGTTCCGCGGACCTTACTAAGGGCGAGGTGGAGACCCCGAGTAGTTTGAGTTACACTCTCGGAAATACGGTATCCCCAGAGACAACCCTGACTGTTATGTCAACAAACAAGCCCCTAGTTCAAGAAAAGGTTGGTGCAGTAACTGTAGCAGTGTCAAACTCTGGAGCACAACTTACTAGGGTTGTCACCACCGGTACTCCATTATCTGGCCGGAGGGCTATGTTTGTGGTGAATGATGCGCCAGCTCATACACTGAATAGAGTTTCACAGCAAAATCAGACTGCTACGATTCAAACATCAAATCTGGCATCTAAGCCGTTCATGACGCCGCTGGGTCCTCTTCAGCTCACTGCAGAAGAATGCAACGAGATTCTCATGAAGCGCGCTTTGCAAGCCCAAGGGATACCCACCCCAGTGATAGATGCTTCACAACTTAACCATTCTATTCTTAATGGGGGGTTGAAGAGTTTAGTTGAAGCGACGACGCAACAAACGCAGGAGTCCATTCAGACTGTACATCAACATCATCTGTTGCATGCGAAACAGGAGCCTGGGACCACTAATAATTCGCCAAAAGCGGTGTATTCCCAGACGGAGCTGCTGAACACCAACAGCATGGTGACGTCACAGCCCTCGGCCGCAGTCAAGGAGCGCCCCTACTCTTGCGGGGAGTGCGGGAAATCGTTCCTTCTCAAACATCATCTTACTACGCACGCGAGAGTGCATACAGGTGAGCGTCCGCATTCGTGCGTGCACTGCGGCAAGGCTTTCGCGCACAAGCACTGCCTCAACACGCACCTCCGCCTGCACTCCCCCGACCGCCCCTACCGCTGCCACGAATGCAACAAAACATTCACCCTCAAACATCATCTCCTCACACATTCACGGGTGCACAGCCGCGACCGTCCTTTCGTGTGCAACGAGTGCGGCCGCGGGTTTCCACTGAAGCGACACCTGGTGACGCACAGCAAGTACCACGCGGGAGAACGGCCTTATGTTTGTTCTGATTGCGGGGAGAGCTTCGCGCAAAAGGATCACCTAGTAATGCACAGTCGCTTCCACGGCTCTCTATCTCCGTACGTGTGCAACGACTGCGGCGTGACGTTCGCGAGGAAGTTCCAGCTCGTCAACCACGGCCGCGTGCACGGCCGGGTGCCCCACGCCTGCCCGGTGTGCGGCAAGGAGTTCCTGCAGAAACGGACGCTTGTGGCGCATATGAAAATACACACGGGAGAAGGCGCAGTTGCATGTTTAGAATGCGGCGAAGCGTTCAAATGTAAATCAGAACTACAGGAACACTGCAAAATGACGAGGCATTGCTTGTCCACGCAATCGCAGCAGCAGCACCAACAGCAACAGGCACAGCAACAGGCACAGCAACAAGCTCAACAACAGGCTCAGCAACAGGCACAGCAGCAAGCTCAGCAGCAGGCACAGCAACAGGCACAGCAGCAAGCACAGCAGCAGGCACAGCAGCAGGCACAGCAGCAAGCACAACAACAAGCCACTGTTATTAAACAGGATGATTTCAAGCCTCAGATTGTGCAGGTGATAGGTGCAGATGGTCAAATAGTGTCTGAAAAGGCACCAGGATATGCGTGTCCTGAATGTGGTTCCTGTTTCAATAATAAGGAGGCGCTGTCGCTGCACGTGCGCCTGCACGCCGGCGACCGCACGTGCGTCACGGACCTGTGCGCGCTCACGGCGGCGCTGCAGCCCGGCCTCGTGGCCGCCGCGCACGCCACGCACGCCGCGCACCAGCACCAACCAATTCAAATAATATCAACGAATCCCAATAATGTTGTTCATACGCAAGTTATAGCTACGAATCATCACGTAACGCCTCCACGACCGAAGGTTCACTTTTGCGGCGAGTGTGGAAAAGGATTTGCAGCTAAACACGGTCTCCTAGCACATCAAAGAAGACATCCTGACGGCAGCTGTACTCTCCGTACGCACGTGTGTGACCAATGCGGCAAGGCTTTCTTCCAGAAGAATCACCTCATGCTGCATCAAAGACAACACATGGATCTTCCGTCTAGGCCTCAGCAAGTCCAACCTGTGGTATCTCAGCAATCGCAGCAACAAGCCGCAGCGCAACAGGCCGCGCAACAAGCGGCACAAGTGCAGCAACAGGTGCAGCAACAAGTGCAGCAACAGGTGCAACAACAGGTGCAGCAACAGCAGCAGCAACAGCAACAACAGCAACAGcagcaacaacaacaacaacagcaacaccaacaacaacaacatcaaAACAGCCTCGATATGGAACAGGACCATCAGCAGGCGACGCATATACAAGTGGTAACAAACAGATCGGGTCAAGTGATAGGCAACCAGATAGTGCTAGGCACGGTGGGCGGCGTGGGGGGCACGCAGACGGTGCGTCGCCTGGTGACGCCGCTGCACCTCGTGGGCAGGGACCACAAGCCGCACGTCACGCACATCACACACGCCAAGCACCACAACGCAAGGCACACCACCAGTGGTGACGCAAAAGAAGTGGGTGGCTTACTCCTATCCGCGGGTCGGAACGGGCTCATAAAGTACGAGATATCACTCCCCCAGCCCACCTCCGTAGTGCAAGTGCAACAGCTAGACTGA
Protein Sequence
MCMPTPNNVSGFGYSWGFTSSADLTKGEVETPSSLSYTLGNTVSPETTLTVMSTNKPLVQEKVGAVTVAVSNSGAQLTRVVTTGTPLSGRRAMFVVNDAPAHTLNRVSQQNQTATIQTSNLASKPFMTPLGPLQLTAEECNEILMKRALQAQGIPTPVIDASQLNHSILNGGLKSLVEATTQQTQESIQTVHQHHLLHAKQEPGTTNNSPKAVYSQTELLNTNSMVTSQPSAAVKERPYSCGECGKSFLLKHHLTTHARVHTGERPHSCVHCGKAFAHKHCLNTHLRLHSPDRPYRCHECNKTFTLKHHLLTHSRVHSRDRPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKDHLVMHSRFHGSLSPYVCNDCGVTFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGAVACLECGEAFKCKSELQEHCKMTRHCLSTQSQQQHQQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQAQQQATVIKQDDFKPQIVQVIGADGQIVSEKAPGYACPECGSCFNNKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAAHATHAAHQHQPIQIISTNPNNVVHTQVIATNHHVTPPRPKVHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLPSRPQQVQPVVSQQSQQQAAAQQAAQQAAQVQQQVQQQVQQQVQQQVQQQQQQQQQQQQQQQQQQQQHQQQQHQNSLDMEQDHQQATHIQVVTNRSGQVIGNQIVLGTVGGVGGTQTVRRLVTPLHLVGRDHKPHVTHITHAKHHNARHTTSGDAKEVGGLLLSAGRNGLIKYEISLPQPTSVVQVQQLD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932957;
90% Identity
-
80% Identity
-