Basic Information

Insect: Hypena proboscidalis
Gene Symbol: -
Assembly: GCA_905147285.1
Location: LR990128.1:4201041-4210268[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 8.7e-05 0.009 17.5 0.7 1 23 203 225 203 225 0.99

2 30 0.0047 0.49 12.1 1.0 2 20 257 275 256 277 0.93

3 30 3.1e-05 0.0032 18.9 0.5 2 23 311 333 310 333 0.96

4 30 3.3 3.4e+02 3.1 0.6 2 15 348 361 347 366 0.80

5 30 0.09 9.2 8.1 0.1 2 23 379 401 378 401 0.95

6 30 0.0035 0.36 12.5 0.4 1 23 417 439 417 439 0.95

7 30 1.6e-05 0.0016 19.9 2.0 1 23 477 500 477 500 0.97

8 30 0.00064 0.065 14.8 3.9 2 23 540 562 540 562 0.97

9 30 0.0029 0.29 12.8 0.2 1 23 612 635 612 635 0.97

10 30 0.0012 0.12 14.0 0.2 1 23 689 711 689 711 0.97

11 30 0.0062 0.64 11.7 7.0 1 23 722 744 722 744 0.98

12 30 0.022 2.2 10.0 1.2 2 23 756 777 755 777 0.96

13 30 0.0011 0.11 14.1 0.2 1 23 787 809 787 809 0.98

14 30 2.3 2.4e+02 3.6 6.9 1 23 839 861 839 861 0.93

15 30 0.0037 0.38 12.4 3.3 1 23 872 894 872 894 0.97

16 30 5.9e-06 0.00061 21.2 1.2 1 23 902 924 902 924 0.97

17 30 0.00078 0.08 14.5 0.2 2 23 944 966 943 966 0.97

18 30 3.7 3.8e+02 3.0 0.1 1 22 984 1005 984 1006 0.80

19 30 0.1 11 7.9 3.4 1 23 1013 1035 1013 1035 0.97

20 30 0.046 4.7 9.0 2.4 2 23 1046 1068 1045 1068 0.94

21 30 0.054 5.5 8.8 0.3 2 23 1091 1112 1090 1112 0.95

22 30 0.012 1.2 10.8 0.3 2 23 1193 1214 1192 1214 0.94

23 30 6.4 6.5e+02 2.2 5.9 5 23 1224 1242 1222 1242 0.94

24 30 0.011 1.1 10.9 1.9 2 23 1253 1275 1252 1275 0.95

25 30 0.48 49 5.8 4.9 2 23 1292 1310 1292 1310 0.94

26 30 7.8 8e+02 2.0 2.8 2 20 1355 1373 1355 1376 0.87

27 30 1.3 1.3e+02 4.4 1.1 2 23 1383 1404 1382 1404 0.92

28 30 0.0086 0.88 11.3 0.7 2 23 1415 1437 1414 1437 0.94

29 30 2.7 2.7e+02 3.4 0.6 2 23 1453 1471 1453 1471 0.79

30 30 9 9.2e+02 1.8 3.1 2 20 1475 1493 1475 1495 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	8.7e-05	0.009	17.5	0.7	1	23	203	225	203	225	0.99
2	30	0.0047	0.49	12.1	1.0	2	20	257	275	256	277	0.93
3	30	3.1e-05	0.0032	18.9	0.5	2	23	311	333	310	333	0.96
4	30	3.3	3.4e+02	3.1	0.6	2	15	348	361	347	366	0.80
5	30	0.09	9.2	8.1	0.1	2	23	379	401	378	401	0.95
6	30	0.0035	0.36	12.5	0.4	1	23	417	439	417	439	0.95
7	30	1.6e-05	0.0016	19.9	2.0	1	23	477	500	477	500	0.97
8	30	0.00064	0.065	14.8	3.9	2	23	540	562	540	562	0.97
9	30	0.0029	0.29	12.8	0.2	1	23	612	635	612	635	0.97
10	30	0.0012	0.12	14.0	0.2	1	23	689	711	689	711	0.97
11	30	0.0062	0.64	11.7	7.0	1	23	722	744	722	744	0.98
12	30	0.022	2.2	10.0	1.2	2	23	756	777	755	777	0.96
13	30	0.0011	0.11	14.1	0.2	1	23	787	809	787	809	0.98
14	30	2.3	2.4e+02	3.6	6.9	1	23	839	861	839	861	0.93
15	30	0.0037	0.38	12.4	3.3	1	23	872	894	872	894	0.97
16	30	5.9e-06	0.00061	21.2	1.2	1	23	902	924	902	924	0.97
17	30	0.00078	0.08	14.5	0.2	2	23	944	966	943	966	0.97
18	30	3.7	3.8e+02	3.0	0.1	1	22	984	1005	984	1006	0.80
19	30	0.1	11	7.9	3.4	1	23	1013	1035	1013	1035	0.97
20	30	0.046	4.7	9.0	2.4	2	23	1046	1068	1045	1068	0.94
21	30	0.054	5.5	8.8	0.3	2	23	1091	1112	1090	1112	0.95
22	30	0.012	1.2	10.8	0.3	2	23	1193	1214	1192	1214	0.94
23	30	6.4	6.5e+02	2.2	5.9	5	23	1224	1242	1222	1242	0.94
24	30	0.011	1.1	10.9	1.9	2	23	1253	1275	1252	1275	0.95
25	30	0.48	49	5.8	4.9	2	23	1292	1310	1292	1310	0.94
26	30	7.8	8e+02	2.0	2.8	2	20	1355	1373	1355	1376	0.87
27	30	1.3	1.3e+02	4.4	1.1	2	23	1383	1404	1382	1404	0.92
28	30	0.0086	0.88	11.3	0.7	2	23	1415	1437	1414	1437	0.94
29	30	2.7	2.7e+02	3.4	0.6	2	23	1453	1471	1453	1471	0.79
30	30	9	9.2e+02	1.8	3.1	2	20	1475	1493	1475	1495	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCTATCTTCACGGTGGACAATTCCTTGCAGCTTGCGGAGATGGTAATGGAATGCGCCCAGGTGAAGATTTACGATGGCGATGGGCTGCCAGATAAAGTGTGCTCAGAATGCATACAAAAGCTGAGTAGCGCTTACATTTTCAAACAACAGTGTGAGCGCGCCGACCAGGAGCTACGAAGAAACTATGTTCCACCACCAGGATTCAGCATCAGTCCGCCCCCCAATAGACAGAGTAGCGACTCGGCATTCTCCAATCACACTGACAGCTCTAATCTCACAAAACCGACATCTACCATTGAAGAGAAAATATCTCCTGCATCTAGAGCTAGAAAACGAAGCATCGATAGTGATGGGAACACATCCGTCGGCGGTCAATCTAGTGATACCAAACCTACCAGCACTAAACGTGTGCAAGAGCTGAGGAAATCGCAGAAGAAAAGAGCGCGGCTGCAATCTAGCAATGCCTCTCAAAACGATTCCGATTACGAGGACAACAACGATTTATACTTACCAGAAACTGATGATTCAGATGAACCACTGCTAAAGAACGACTTCAAATGTAAATCGTGTCCCAAAGAGTTCGCTTCTCTGAGAAGTCTCGCCAATCACACACGAATTCACGAAAAGAAATCAGATAAAGCGCTTGTAGAGAATGCGGTCGTTGATATACCGAACAACAACACAGAAGATGCTGCCGATGTGGAGGATAAATTAAGCTGTGATAAGTGCGAAAAAACGTTCAAGTTGAAGATCATGCTGAAGCGTCACCATGACGTATGCACCGGCAAACCAGTCATCAAATCGCCACAAAAAGAGCTTCTCATATCCTTAGAACCGATCGACACAAAGCATCTAACTCAGACAGTAATCACTGTCTCCTGTGAATACTGCACGGCTAAATTCAAAACTCTAGATAACTTATCGAAGCACATGAAAGTTGTTCATGCGGCGGTATTgaagagaaaagaaaataaaaaggtgCCTGTCCCTTGCCTGTATTGTAACAAGATATTCGATGACTACTATCAGCACACTTCACACTTTGGTTTGTGTTCCAAACGAGATGATTCGAAACCGCTGGAGTGTCCGGTGTGTCTCAAAGTGATGTCTCGTAAGGCGGCGTATTACCAGCACATAAAGAACATTCACTTCGAGCCGCGCTTCATGGGTGTGGAAGGGAGCTCGCAGGAGGTGCACGAGTGTCGGATGTGCAATAAGAAGCTAGCGTCGCAGGAGCTACTCATCAGACACTTGGCAGCGCATGTATCCAATATTGAGGATGGCACTGGTGACGACTCAcgAGGAAGCATATTTGACGATGGCGGGTCTGTTCATTCGGTAAATAGTAACACCTACCCAGCTGCTGGAGGCAAATACAAATGCGACGTATGCAACAAGGAATTCAAATACAAGAAAGCGCTTCAAACGCATCAAATTAAGTCTCATACCGAACTTCCTGTTGAAGTAAAAACTGAGCCGCCCGACAAAGCGTCGACCAGTCTTCTTATTGAAAAGAAATATCGCTCAGAATCTGAAGAATCTAGTCAAGAAGAGGAGGATAATACGTGCGATATTTGTGAGAAGCAGTTTTCATACAAGCGTCTTTTAATTCATCACAAGAGAACGAAACATAACATGAGCTCAGGGCACAAAAGAGCCAAGATCTACCTCAAGGACTGCTCAGTCCGCTGCCTCATCTGCGATCTACAGATGAAAGTAGGCGATATAAACGAACACAATCAAACGCACATCGCAAAGAACATGAAGCCTAGGAACCTATACACGTGCGCAGAATGCGAGGCGACGTTCAAAGCGTGCAGTGCGCTCGCAAACCATATAAAATTAGTTCACAGGCTAAAGCAGCAAGTGGAAGAGACTATGGTAAATCCGTCGGATTTTTGTGAAGTCGTTGTGGCCAAGTCGGAACCCCTGGACTACATCCAGAGTCACAACGACTATGGAGAGGTTCCGATCGAGCAGGGCAGCAAAGCCATGGTCGACCTGAGCGGTTTCACGTGTCCCATCTGCGACAAGAAGATGCCCACGCTCATATCCCTGAAGCGACACGTCAACTGGCACACGAACGTCGGCAAGAGTTTGGAGAAGAAATATGAGTGCTTTGTTTGTAAAGAGaccTTCAGATTCAACTGCCACTACAAGATTCACATGCGCGAGCACTACACGGACACGAACCTGGACCCGGTGCACCTGACGTGTAACATCTGCGGACGCAAGAGCAAGCACCTCCGCGCGGCGCAGGCGCACATGACCTACCACAAGCAAACCCGATTCAAGAACAAGGACTACCAGTGCTCCATCTGCGAGAGAGTGTTCAGTGTGAGAAAGGTATACCTCTCGCACATGGCCATCCACTTCAAGAGAGGTGAGAGCATATCGAACACCATCATCGGCGTCGAAACCGTACCCAACAATCTCGACCAAAAAGGCTTGGAGGGCGCTCACATCTGCCAGCACTGCGGCAAAGTGTGCGACTCGGAGAACTCGCTCAAATGTCATCTCAGTTGGCATAACTCCAAAACTCTCCTGTACGGTGCCCGGCACGAGTGCCAGATCTGCAAACTCAAATTCACCAACAAGAAACGCCTGGAACTACACACCAGGGCTCATTACGAAGATGTAAACGGACCCTTCAAGTGCAACATTTGCGGCAAAGGCTTTACCGACGAAAACTATTTCAAACGACATGTCAAAGGTCACAACTTTGATCACCACTCCCACAAGAAGAGGATCGAGAAGCTCAGGAAGGATAAAGTGAAATGTCCCATATGCTCGCGGTATTACCCAGACCTGGTGAAATTGATCCGTCATCTGAGACGGACCCATCCCGAGAGTAAGATGATCAAACAAGACCCCGATGCGCCTCCTCAGACCTACTACTCGTGTAAATTGTGCGCCAAAGTGTTCCTCGAAGAGCGTCGACTTCAGGCGCACGAGGAAGCTCATTTGAGGAAACCAGAGTTCTTTAAATGCAAATTCTGTGGCAAAAAAACCCCATCCCTGAAAAATCACAGGATTCACATAAAGGGTCACTTGACTCAGAAGTACTTCGACAACCCTCTGAAGTGTCAGCACTGCGACGCCACGTTCCAGCGCGGCTACGACCTGCACTACCATGTGCGTGACGTCCACGGCATCGAGGAGACGTGGATCGCCGACCGCACGGAGCAGCGCCTCGTCGGACCCCTCAAGGACCTGCAGTGCTCTATCTGCATGAAGGAGCTCGCCAGTAAAGGGAACTTCGAGCGACATCTCGATTACCACAACTCACTGAGATGCAACTATTGCTTCGATTATTTCAGCTCTCTCAAGTTTCTCGAGGGTCACTTGGCGTTTGCCTGTGAAAAGAAAAAATTGATAGGCGATACAGAGATTTACCCCAGGAGAATTAAATGTCACATATGTTACAAACCATTCCATTTGCAAGTGAAGCTAGACTGCCATCTGCGCACGCAGCACGATATAAAAGTATGCCGGGAGGCGTCCACCGAAAAGAAAGATTTGATCTGCGATTATTGCTTTAAAGTGTTTGAAAATGATTATGCTCTTTCTAATCACAAAATTTATCATCGCACTATAGGTTACTTTGGATGTATTTATTGCAAGAGAAAGTTTAATACAATGACTTCATAcagaaaacataaaaatcatCATTTGTATCAAATTAATGTGGAGGACCCGACAAAGTGTGAACACTGTGACCAAACATTTGAAATGTTTAAAGAAATGATAAACCACATGAAAGATGAGCACGGTGATGATAAAGACTGGGTCATACAGCCAAAAGAGTCCATCGAGGAGACGTGCACTATATGTAACAAGACATTCTTCAACCTGCACAGGCACATGACGTACCACGAAGAGAACAGGTGCAGGAAGTGCGGCGAGTACTTCTTCTCCACGCTGGACTGCGACAACCACCTGTGTGCCATCGAAAGTGACGACGAGGGCATTGACAGTGTGACCACCATCGAACAAACCAAATATGAGGAATGTAGCTTCTGCTTCAAAACTATCACCAGGAAGAGTTCGAAATCAAAGCATGACAAGATACACAAGGGATCCGGTTCTATATCTTGCAGATTCTGCTCGCTCAAATTTAAGACAATAGACGCGTTCAATATTCATTCCTTTTCGCATCGAAGCAGAAAATATACCAAGAAGCCTATAAAGTGTAGAAAATGCGGCGAAAAATTCATTAAATACGGACCTTTTATTAAGCACATGAAATTCATTCACAAATCCGTGAAGAAATTACATTACCGAGCGGTGGTAAAGCCGGAGCAGTGCGTGGTGTGCGGCGAAGAGTTCCCGAACCTGCACAACCACTACCGAGCGCATTTGCTTAACCAGTGCCAGGCCTGCCGCAAGTACTTCTCTTCCTCTAAACTGTTCTCATTACACAAATGCGACACGGAAGACTCTGATCCCTCTAAAGTGTTCACGAGCGACGTCAACTTGACCCAACTGATCAACTCTTACGTTCCTAAAGATTTGAAAGACGACGAGAAATACTATGGTTACACCGACGTCGAGGACGAAGAGGAAGATGACGCGCTGTCTCAGGTGTGCGACGAGGGCGATGAGAGCCAAGACATGGATTTCAAAGATATAGACATTTCTAACGAAGTTCTCCAGCCAATATCTATTCAGTCTCCGATCATCTCTGATGTGTTGTCTCTTTACCAGAAAGAAATGACGCCTGCTGTGGTGGATGATAACGTGGTGACTCTAACGGACGATGATGACGACGTGGACCACGTGCCACAGAACCACATCGATGCGATCGTGATCATTGATGATGACGACGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMVMECAQVKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPNRQSSDSAFSNHTDSSNLTKPTSTIEEKISPASRARKRSIDSDGNTSVGGQSSDTKPTSTKRVQELRKSQKKRARLQSSNASQNDSDYEDNNDLYLPETDDSDEPLLKNDFKCKSCPKEFASLRSLANHTRIHEKKSDKALVENAVVDIPNNNTEDAADVEDKLSCDKCEKTFKLKIMLKRHHDVCTGKPVIKSPQKELLISLEPIDTKHLTQTVITVSCEYCTAKFKTLDNLSKHMKVVHAAVLKRKENKKVPVPCLYCNKIFDDYYQHTSHFGLCSKRDDSKPLECPVCLKVMSRKAAYYQHIKNIHFEPRFMGVEGSSQEVHECRMCNKKLASQELLIRHLAAHVSNIEDGTGDDSRGSIFDDGGSVHSVNSNTYPAAGGKYKCDVCNKEFKYKKALQTHQIKSHTELPVEVKTEPPDKASTSLLIEKKYRSESEESSQEEEDNTCDICEKQFSYKRLLIHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKNMKPRNLYTCAECEATFKACSALANHIKLVHRLKQQVEETMVNPSDFCEVVVAKSEPLDYIQSHNDYGEVPIEQGSKAMVDLSGFTCPICDKKMPTLISLKRHVNWHTNVGKSLEKKYECFVCKETFRFNCHYKIHMREHYTDTNLDPVHLTCNICGRKSKHLRAAQAHMTYHKQTRFKNKDYQCSICERVFSVRKVYLSHMAIHFKRGESISNTIIGVETVPNNLDQKGLEGAHICQHCGKVCDSENSLKCHLSWHNSKTLLYGARHECQICKLKFTNKKRLELHTRAHYEDVNGPFKCNICGKGFTDENYFKRHVKGHNFDHHSHKKRIEKLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKQDPDAPPQTYYSCKLCAKVFLEERRLQAHEEAHLRKPEFFKCKFCGKKTPSLKNHRIHIKGHLTQKYFDNPLKCQHCDATFQRGYDLHYHVRDVHGIEETWIADRTEQRLVGPLKDLQCSICMKELASKGNFERHLDYHNSLRCNYCFDYFSSLKFLEGHLAFACEKKKLIGDTEIYPRRIKCHICYKPFHLQVKLDCHLRTQHDIKVCREASTEKKDLICDYCFKVFENDYALSNHKIYHRTIGYFGCIYCKRKFNTMTSYRKHKNHHLYQINVEDPTKCEHCDQTFEMFKEMINHMKDEHGDDKDWVIQPKESIEETCTICNKTFFNLHRHMTYHEENRCRKCGEYFFSTLDCDNHLCAIESDDEGIDSVTTIEQTKYEECSFCFKTITRKSSKSKHDKIHKGSGSISCRFCSLKFKTIDAFNIHSFSHRSRKYTKKPIKCRKCGEKFIKYGPFIKHMKFIHKSVKKLHYRAVVKPEQCVVCGEEFPNLHNHYRAHLLNQCQACRKYFSSSKLFSLHKCDTEDSDPSKVFTSDVNLTQLINSYVPKDLKDDEKYYGYTDVEDEEEDDALSQVCDEGDESQDMDFKDIDISNEVLQPISIQSPIISDVLSLYQKEMTPAVVDDNVVTLTDDDDDVDHVPQNHIDAIVIIDDDDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -