Hpro013175.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypena proboscidalis
Gene Symbol
-
Assembly
GCA_905147285.1
Location
LR990133.1:19913705-19939110[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.046 4.7 9.0 4.0 1 23 156 181 156 181 0.93
2 26 0.0072 0.74 11.5 0.3 1 23 199 221 199 221 0.96
3 26 0.087 8.9 8.1 0.2 5 21 229 245 228 246 0.92
4 26 0.00085 0.087 14.4 1.3 1 23 349 372 349 372 0.96
5 26 0.0049 0.5 12.0 0.3 1 20 378 397 378 400 0.84
6 26 2.9e-05 0.0029 19.1 1.1 1 23 406 428 406 428 0.98
7 26 1.7e-06 0.00018 22.9 1.1 1 23 434 456 434 456 0.99
8 26 0.00027 0.028 16.0 2.8 1 23 462 484 462 484 0.99
9 26 0.00057 0.058 15.0 2.6 1 23 490 513 490 513 0.96
10 26 0.00013 0.013 17.0 0.7 1 21 519 539 519 540 0.94
11 26 5e-05 0.0051 18.3 1.0 1 23 573 596 573 596 0.97
12 26 0.00015 0.015 16.8 1.2 1 21 601 621 601 622 0.95
13 26 0.0085 0.87 11.3 0.4 1 23 641 663 641 663 0.94
14 26 2.7 2.8e+02 3.4 0.0 5 21 673 689 670 690 0.93
15 26 0.0006 0.061 14.9 0.7 1 23 785 808 785 808 0.97
16 26 1e-05 0.0011 20.5 0.8 1 23 814 836 814 836 0.98
17 26 0.025 2.6 9.8 2.6 1 23 842 864 842 864 0.98
18 26 2.4e-06 0.00025 22.4 1.1 1 23 870 892 870 892 0.98
19 26 9.2 9.4e+02 1.7 2.9 1 23 1226 1248 1226 1248 0.94
20 26 0.59 61 5.5 4.0 1 23 1273 1297 1273 1297 0.93
21 26 0.0046 0.47 12.1 0.3 1 23 1322 1344 1322 1344 0.96
22 26 0.12 12 7.6 0.7 6 23 1353 1371 1351 1371 0.95
23 26 0.071 7.3 8.4 0.8 1 23 1472 1495 1472 1495 0.90
24 26 0.0067 0.69 11.6 0.4 1 23 1501 1523 1501 1523 0.97
25 26 0.0006 0.061 14.9 1.1 3 23 1531 1551 1529 1551 0.98
26 26 1e-05 0.001 20.5 0.2 1 23 1557 1579 1557 1579 0.99

Sequence Information

Coding Sequence
ATGATACCGGATATAGATGGTTCGGGTCCCCAGCCTATACTAAACACACTTGAAAGTGATAAAAATCATATAGATACTTGTagatacaataaaaacacagcTAAAACCAAGAATTGTGATGAAAACACTTGCATAACTGAACAGTTTGAGATAAGTCAAACTTATAAAGAAATTGTACTGCCACAATCTCAGAATGATTGTGGTGACAGCAATGTAATTGACAGCAAAGAGGATGAAGATAAAAGTCTTAACAATCCTGAAAGAttagtagaaaataatattaatGTAAAAGTATGGCAGGTAAAGATAGAAAAAATAGCACACCATAAATGCAATTGCTGTCCTAAAGCATTCCTAAATGTTAATGACCTTACCACTCATAACAAAAATCATGAGAAAAGATTCCGTGAACatGTTTTAAGCTCTTTTGTGAAAATGGAGCAGTTTAATCTATCTGAAAACAAGTTTGTCTGCAACCATAACAACTGCTCACAATGTTTCCCGAGTAAACAGAACCTTATGTTACATCAATCTGCGAAACACGCAAGACAGATAAAAGCCAGACTTTACGAAGATTATAGCAACGAGAAGCCTTACAAGTGTGAAGAGTGCGACTTGAGATTTGTCGCTGAGACTACCCTGAGAACACATGCGTTCGTTCACAAGTCGTACCAGTATATCTGCTATTGCGGCATCGGATTCTACCGGCAAAAAGACTTGAAAGCCCATAAAAACTTAGTGCAATGCACCAAACCACGGGCTGAAAACATAAAACCTCCTCACAACATACAAAAAGTAGAACCTCCCGTAACAAATGTACCAGTTAAGGTGAAGGTTAAAACTCATAAGGAAAAACGAATAAGAGGCAAATTGCAACGGAAAGCGGATATAATGTTACGTCAAAAATCAGgagaaaataatactaaaaataagaaaaaacgaTGCGCAGTCCAACCTTCGTTGCAGGCAGAAATAGATTCAATGAGACAACGTAAAAAAATTTCGAGTATAGATGTGGAATTTCGGGAAACTATAAACAAAAGGTTCGAGTGTCCTAAGTGTAAAAAAGATTACCGGTCAAGATTTAATGCAGAAAAACACTATCGTGGTGTGCACAGAGGCGAGCGGCCGTATTCGTGTAAGGTATGCGGTAAAAGTTTCACCCAGGACGGCATACTAACTGTTCATTTGTGGAGACACTTGGGAGTTAAGAATTATCCTTGCCATTATTGCGAAAAAAGTTTCTATGACATCGGTGCGCTAAAACTTCACGAGAGGACACATTCCGGGTACAAGCCTTATAAGTGTGGAGTATGCAGGAAGAAATTCAGTGACCCTAGCGCCTTTCAGCGCCACACGCGTATACATACTGGGGATAGAAGGTACAAGTGCCCGTACTGCCCTAATGCCTACACAGATCATAGTCAGCTTTATATGCACAGAAAGCGACATGAGAATAACAGAAACTTCATATGCAATAAGTGTAAAAAgggtttttttaacaaatctGACCGACGACGCCATATTTCTAGAGTTCATAACTGTGTTTACAATTTCACGTGTAAGCACTGCGGTAAGGGCTTCGGCTCAAAAAGTGAGATGAAAATACATGTACTGAAGGTGGCTAAACGATGTGACATTTGTGATGGAGAATTTTTCTGTCAAAGATCTATGCAAATTCATCATCAAACACATGTCAAAAAAGTTGCAGCAAAATTTGTATGCGACCATTGTGGAATCGAATACtcaaagagaaataatttagtGAGACACATACTGCGCAACCACGCGCCGCAAAAATATGTATGCGATCATTGCAAAGAAAGATTCAGTTACAAGGAAACTCTAAGGGATCACATAATGAAACCTACCAGACAATTAAAAACCAGGCTTAACGAAGATGATAGCATTGAGAAACCTTTCAAGTGTGAACAGTGTGACTTTAGGTTTGTTGCTGAAAGTACTCTGAATGCACACGCATTTCTCCACAAACCAttccatcataataatatctgctATTGCGGCATCGGATTCTACGAGCTCGAAGACTTGAAAGCCCATAAAAAACTAGTGCAATGTCCTGAACCACGGATTGATAACATAGAATCTCCTCACAACATAGCAATAGTTGACCCTGCCATAAAAACGAAATCAATCAAGATGAAGAGAAAACGAATAAAAGGTATGTTGCAACTGGAAGTGGATAAAATACAACGTCAAAAAACAGGACCAAGAAGTGCAAGAAATGAGAAAAAACAATGCAAAGTCCAAACATCGGCAATAGCCTCAATGATACAACGGCCAAGATATTCGAAATTAGATGTGGAATTTCTGAAAACTATTAACAAGAGATTTGAGTGTCCTGAGTGTAAAAAAGATTTTAAGTCTTTGTATGGAGCCCAAAACCACTATCGTTATGTGCACAGAGGCGAGAGGCCGTATCCTTGTAAGATATGCGGTAAACGATTCACCCAGCACGGCGCACTAAGCCTACATCTGGCGAAACACTTAGGAGTGACTAGATTTACGTGCCAATATTGCGAAAAAGGTTTCTACGAATTAAGTAAACTAAAATTTCACGAGAGAACACACACCGGGTACAAGCCCCACAAGTGTGGTCAATGCGGGAAAGAATTCAGTGATCCTAGCGCCTTTCTTCGCCACACGCGAGTACATACTGGGGAACGGAGCAAAAGTCTCACAGATGAAAGTTGTCTTGAAAACACTCCAATACCAAAAACTAGTGATAAAATGACTGCCATAATTGAAAGTTCTCATGATAAAATTACCACAACTGAAGTTTATGATGAAAATACTGCtgcaaacaaaaattgtaatgaaaactATAGAAATGCCATAAATGACAACTGTGATCAACAGTTTGAGAATCAgagttttgacaaaattgtaaCACCACAATCTCTAAATGAACTTGGTGACATTGACGTAATGGACAGCAATGAAGGCAATGGTTATAAAACTTATGACAATGCTGAAAAATCACAGATACCACAATCTCAACATGAACTTAGTGATATTGACATAATGGACAGCAATGAGGGCAAAAGTTGTAAAACTTCTGACAATGCTAAAAAATCACAGATACCACAATCTCAACATGAACTAAGTGAACCACAATCTCAACATGAACttattgacattgacataatggaCAGCAATGAAGGCAAAAGTTGTAAAACTTGTGACAATGCTGAAAAATCACAGATACCACAATCTCAACATGAACTAAGTGTACCACAATCTCAACATGAACTTAGTGATATTGACATAATGGACAGCAATGAAGGCAAAAGTTGTAAAACTTGTGATAATGCTGAAAAATCACAGATACCACAATCTCAACATGAACTAAGTGTACCACAATCTCAACATGAACTAAGTGTACCACAATCTCAACATGAACTTagtgacattgacataatggaCAGCAATGAAGGCAAAAGTTGTAAAACTTGTGACAATGCTGAAAAATCACGGATACCACAATCTCAACATGAACTAAGTGTACCACAATCTCAACATGAACTTagtgacattgacataatggaCAGCAGTGAAGGCAAAGGTTATAAAACTtgtgacaattttgaaaaatctcggacaaataacattaatGTTAAAATATGGGTGGTAAAGTTAGAAAAAATAGTGTACCATAAATGTGATTGCTGCcctaaaatattcttaaatattgaCGACCTCACCACACATAAGATAAATCATAAGGAAAGATTTCTTAAACATGTTATGAGCTCTTATGTGAAAATGGAGCAGTTTACCCTTTTAGACAAGAAGTTTGTTTGCAGCCATAACAACTGCTCACAATGTTTCCCAACTAAACGGGAGCTTCTGTTACATAAAGTGAATCACATACAGCAATCTATGAAACACACCAGACAGATAGCAAGCAGACTTTATAAGGACAATAACCTTGAGAAACCTTTCAAGTGTGAACAGTGTGACTTTAGGTTTGTCGCTGAAAGTACTCTGAATGCACACGCGTTTGTCCACGAACCATTCCAACATGTCTGTTCTTGCGGCGTCGGATTCCACCAACAAGACGACTTGAAAGCCCATAAAAGACTGGTGCATTACATCAAACCTGAGGTTGTAAGCAAAGAACCACTTCATGACATACCAAAACTGGGATCACCCAAAATAACTGAACCAATCAAGGTGAAGTTTCAATTTCATAAGAAAAAACGAATAAGAGGCATGTTGCAACTGGAAGTGGATATATTGCAGCAACAAAAATCAGGACCGAGAAATACAAGAAATGAGAAAAAACAATGTTTGGCCCAAACACCTCTGCAGTTTGAAATAGATTTAATGAAACAACATTCTAAATTATCGATATTAGATGTGGAATTTCTGAAAACTGTTAACAAACAGTTTAAGTGTCCAGAgtgtaaaaaagattttcagtcTATAGCTAAAGCAAAAATACACTACTATAGAGTGCACACAAACGAGCGACCGTATTCTTGTAACGTATGCGGTAAACGGTTCCTCTTGGACACAGCACTAACTGCTCATTTGAAGAGACACTTTGCAGGAAAGAATTTTTGGTGCAATTATTGCAAAAAAGGTTTTGCCAGTAAACATGgacttatacttcacgagaggaTACATACCGGATATAAGCCTTATAAGTGTGAAGTATGCGCGAAGGAATTCAGTGATCCTAGCGCCTTTCTGCGCCACACGCGTATACATACTGGGGATAGAAGCAAAATCAATAAAGTTTTGGTTCGGGAGCGGAATGGCGCCGGCAACGCGCcggccgcgccgcgccgctcgATACGCACGGCGCGCGCGTACCGTGCGGCATCCGAGGCACCCTAG
Protein Sequence
MIPDIDGSGPQPILNTLESDKNHIDTCRYNKNTAKTKNCDENTCITEQFEISQTYKEIVLPQSQNDCGDSNVIDSKEDEDKSLNNPERLVENNINVKVWQVKIEKIAHHKCNCCPKAFLNVNDLTTHNKNHEKRFREHVLSSFVKMEQFNLSENKFVCNHNNCSQCFPSKQNLMLHQSAKHARQIKARLYEDYSNEKPYKCEECDLRFVAETTLRTHAFVHKSYQYICYCGIGFYRQKDLKAHKNLVQCTKPRAENIKPPHNIQKVEPPVTNVPVKVKVKTHKEKRIRGKLQRKADIMLRQKSGENNTKNKKKRCAVQPSLQAEIDSMRQRKKISSIDVEFRETINKRFECPKCKKDYRSRFNAEKHYRGVHRGERPYSCKVCGKSFTQDGILTVHLWRHLGVKNYPCHYCEKSFYDIGALKLHERTHSGYKPYKCGVCRKKFSDPSAFQRHTRIHTGDRRYKCPYCPNAYTDHSQLYMHRKRHENNRNFICNKCKKGFFNKSDRRRHISRVHNCVYNFTCKHCGKGFGSKSEMKIHVLKVAKRCDICDGEFFCQRSMQIHHQTHVKKVAAKFVCDHCGIEYSKRNNLVRHILRNHAPQKYVCDHCKERFSYKETLRDHIMKPTRQLKTRLNEDDSIEKPFKCEQCDFRFVAESTLNAHAFLHKPFHHNNICYCGIGFYELEDLKAHKKLVQCPEPRIDNIESPHNIAIVDPAIKTKSIKMKRKRIKGMLQLEVDKIQRQKTGPRSARNEKKQCKVQTSAIASMIQRPRYSKLDVEFLKTINKRFECPECKKDFKSLYGAQNHYRYVHRGERPYPCKICGKRFTQHGALSLHLAKHLGVTRFTCQYCEKGFYELSKLKFHERTHTGYKPHKCGQCGKEFSDPSAFLRHTRVHTGERSKSLTDESCLENTPIPKTSDKMTAIIESSHDKITTTEVYDENTAANKNCNENYRNAINDNCDQQFENQSFDKIVTPQSLNELGDIDVMDSNEGNGYKTYDNAEKSQIPQSQHELSDIDIMDSNEGKSCKTSDNAKKSQIPQSQHELSEPQSQHELIDIDIMDSNEGKSCKTCDNAEKSQIPQSQHELSVPQSQHELSDIDIMDSNEGKSCKTCDNAEKSQIPQSQHELSVPQSQHELSVPQSQHELSDIDIMDSNEGKSCKTCDNAEKSRIPQSQHELSVPQSQHELSDIDIMDSSEGKGYKTCDNFEKSRTNNINVKIWVVKLEKIVYHKCDCCPKIFLNIDDLTTHKINHKERFLKHVMSSYVKMEQFTLLDKKFVCSHNNCSQCFPTKRELLLHKVNHIQQSMKHTRQIASRLYKDNNLEKPFKCEQCDFRFVAESTLNAHAFVHEPFQHVCSCGVGFHQQDDLKAHKRLVHYIKPEVVSKEPLHDIPKLGSPKITEPIKVKFQFHKKKRIRGMLQLEVDILQQQKSGPRNTRNEKKQCLAQTPLQFEIDLMKQHSKLSILDVEFLKTVNKQFKCPECKKDFQSIAKAKIHYYRVHTNERPYSCNVCGKRFLLDTALTAHLKRHFAGKNFWCNYCKKGFASKHGLILHERIHTGYKPYKCEVCAKEFSDPSAFLRHTRIHTGDRSKINKVLVRERNGAGNAPAAPRRSIRTARAYRAASEAP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-