Basic Information

Gene Symbol
-
Assembly
GCA_905147285.1
Location
LR990148.1:7430885-7433272[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 9.7 1.8e+04 -3.0 0.0 22 33 242 254 241 258 0.79
2 5 1e-06 0.0019 19.4 0.1 1 45 274 320 274 321 0.88
3 5 1.5e-07 0.00028 22.1 0.0 3 44 329 374 327 376 0.95
4 5 1.7e-10 3.3e-07 31.4 0.0 1 43 380 422 380 424 0.97
5 5 0.0044 8.3 7.7 0.0 3 45 432 476 430 477 0.87

Sequence Information

Coding Sequence
ATGATGGACActgacgatgatgatgatgatgacgatgacGATGAGGATGAAATAAGGAAGCTTGACGCTGCCTTAGAGGAGGCTGAGGTCGACGTGCGTGAGAACTGTTCGGTTGTAACGTCAGGTTGGGCCCTCGATCATTTTTCTCAGTCTTCATCACTGACTAGTCATCAGTTAACCAGCGTCTCCCCCTACAGTCCAGAACAACTAGATGAATTGGCACAACTCGATGCTGCCATAGCACTCAATAAAGAATATGACGAAAAAATCAGACGATTAGAACGAATTCTTGGATTGCGCATTCGAGAATGTAGAGATAAACTTCTAGAAATTCAATCTAGTGGTTCACTGTTCGAGAAAACCGAAGTTTTTCGCTACATCAACTGTGGTAGACCTTATTTCAGAGATTCTAGAAATCGTCCTGCACCAGACAATGCAGACACAATCATAACGAAAGCTGAAATGTATGATTTCTCATTAGTTGCTTCTGTACCAGGATGGACAGTCAATGACAAAAATCAATTTGCAAATGTAATGGTCAAAGTATCGCTAGAGCTTAAGAAAGAAACTtataatcaaaaaattataGATCTAAAACATTTACTAAGTGAAAAGCCcgataaaaaaattgagaagGAAATAATTAAACTGAGGCGGGAAAGGGACagtttaaacaataaattgccATTTACAGAACTAGCTCTACCTCTGGATCAAGAGTATGATTGGGAGGAAATAGTTGCTGAAAGATTAAACAGGCGACATACACCTCGTGAGTACCAGTGCCTCTGGAAACTATACTTTCATCCTTCTATTAACAAATCCAACTGGGGTCACAATGAACATAAAGCACTACAAGCGATTGCAGCAGTCAACCGATACCAGGATTGGGATGAAATTGCTAGACTACTCGATACTAACAGAACTGGCTACCAATGCTTTGTATATTTCCGGACAAATATGACTAACAGCAGCATTGGAAGGAAATGGTCTCCAGAAGAAATAACATATCTCAAGCGTCTGGTGGATTACTTCAGGGAAGACTTTTATATTCCATGGGGTAAAATAGCGGCCGCTATGGAGAATAGGACTAAAAtccaaatttacaataaatatttgcgAGTCATTGAGCAAAGGAAGGGTAGATTTCTACCAGAAGAAGATGCTGTTATTCTCAATTGTGTGGAAAGATTTGGCCCTGACTTTAAGAAAGTTACTCAATTCCTTGCCCACAGGTCCATGGTACAAATCCGGTCAAGATATCAGGTACTGAGTAAAATGAGAGTTTCAACTGTTTGGTCAGTGGAAGATGACAGGAAACTTTTACAACTTATGACTAATGAGGACTCCAAGACTAGTTTTTCAATGGCAACCAAATATTTTCCTGGACGGAACAGGATAAATTTAAGATCTAGATATATCACTTTGATAAAATGGATGAAAGCACATCCTAACTTGGATATAGAACATGCACCGCGCCGTGGAGCTCGTCGATTAAATCACGGTCTTGCCTCTGATGATTTGCCTAAAGcaattgaaaacttaaaaaatactttgaatACGGAAGTTGCAATAAAGAAAGAGCGCAAGAAAATCACCAGAGATTCTAGAGAGCAAGATATTGAAGACGCCATTATTGCGATGCTTGTCACTGAAGGAGTAAAAaatgaagaaaaagaaaaatctattTCTGAGGGCACTCTAGTGCTGCCAAATGACACGGTTGTCACAGCCAAAGAAATGAATTTAACTAACCTACGTAAATGCCTTCTATTTCTATCAGCAAGTTTAAATAGAGAACATTTTACTAATTCACACTTCTATGATGAGTATCCAGACTTGGTTGACTCTAGTCAGGATATCAGTCTCATTAGGATAAAGTCTTATTCAAAGAATCCAGTAAAAACAATTCATTATGATAATACTTCTGATGTATGGGGCAAACCTGTTCAGGGTCCAAGAACTTATGTTTTACCACCTCATTATTCAACAATAACTGGATGTAAAGCATTGATGACCCATGTTTCTTCATATGCTTTGTATTGTAATGCATTAAACTTGCATATTTTAGTACGAAGGAATATTCTATTGAAGAATCAAATGGATCTACTGTTAGAACggttttattcattatttctatGGCCTTTGCTGCTTTCCAATGAAGGGCCTCAGGATTTTCACAACTCAAAGATATGTAAAAGAGATTCATTTTATGTACGACCACCACCATTGCCGCATTCACCTGCGgtgacaattaaaataaaaaattacaagaaaTTCAAAACCCAGTCTGTGTCAGAGATTATAGATGTTACTGAACAAGAAGACTCAAGAGAGAATTTAATTGAAGAAGAATTTGAGCAGAGGATGATGTTACAGAATTTGTGa
Protein Sequence
MMDTDDDDDDDDDDEDEIRKLDAALEEAEVDVRENCSVVTSGWALDHFSQSSSLTSHQLTSVSPYSPEQLDELAQLDAAIALNKEYDEKIRRLERILGLRIRECRDKLLEIQSSGSLFEKTEVFRYINCGRPYFRDSRNRPAPDNADTIITKAEMYDFSLVASVPGWTVNDKNQFANVMVKVSLELKKETYNQKIIDLKHLLSEKPDKKIEKEIIKLRRERDSLNNKLPFTELALPLDQEYDWEEIVAERLNRRHTPREYQCLWKLYFHPSINKSNWGHNEHKALQAIAAVNRYQDWDEIARLLDTNRTGYQCFVYFRTNMTNSSIGRKWSPEEITYLKRLVDYFREDFYIPWGKIAAAMENRTKIQIYNKYLRVIEQRKGRFLPEEDAVILNCVERFGPDFKKVTQFLAHRSMVQIRSRYQVLSKMRVSTVWSVEDDRKLLQLMTNEDSKTSFSMATKYFPGRNRINLRSRYITLIKWMKAHPNLDIEHAPRRGARRLNHGLASDDLPKAIENLKNTLNTEVAIKKERKKITRDSREQDIEDAIIAMLVTEGVKNEEKEKSISEGTLVLPNDTVVTAKEMNLTNLRKCLLFLSASLNREHFTNSHFYDEYPDLVDSSQDISLIRIKSYSKNPVKTIHYDNTSDVWGKPVQGPRTYVLPPHYSTITGCKALMTHVSSYALYCNALNLHILVRRNILLKNQMDLLLERFYSLFLWPLLLSNEGPQDFHNSKICKRDSFYVRPPPLPHSPAVTIKIKNYKKFKTQSVSEIIDVTEQEDSRENLIEEEFEQRMMLQNL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-