Basic Information

Insect: Hypena proboscidalis
Gene Symbol: clz9
Assembly: GCA_905147285.1
Location: LR990149.1:5649842-5652532[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-07 0.00011 23.0 0.0 3 36 12 45 10 50 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-07	0.00011	23.0	0.0	3	36	12	45	10	50	0.93

Sequence Information

Coding Sequence: ATGGATCGACTAAAACGTAAACAATATACAGCTGCTCAACTTGACGCTGCTCTAATGGCTATCACTAATGGAGCAAGTATCTATGAAACCTCGAAGAAGTTTGGGATTCCTAGAACAACTCTTCGTGATAAGAGAGATAACAAGTACACGAATGAAAGCTGTGGTGTTCAGACCGTTTTCACTAAGGACGAAGAACGTCAGTTAATAGACTGGATTCACTATCTAGGAAGATTAGGTTTTCCTGTAACAAAAGACCAGCTGCTGGAAACGGTCTCAAAACTAATAGAAACATTAAAGCGCCCGAATCCATTTAAAGATGGAGTGCCCGGTCGACACTGGTTTCAAAATTTTTTAAAACGGCATCCCTCAATTGCGAAAAGAGTTACACAGAATTTGCCAACAAATAGAAGCGAAGTGAAAGAAGAGGCTATAAGATTATGGTTTGGTCGTGTGCGacaatattttgaacaaaataatttaattgaagtgctaGATGATCCGGCAAGAATTTTTAACTGCGATGAAACTGGATTCTTTTTGTGTCCCAAGGCAAAACAAGTCATTGTGCAGCGAGGCAGCAAGAAGGTATATACTCGAGTGGCCAATGATGAAAAAGAGTGTTTAATAGTATTGGTTAATGTTGCTGCTAACGGCAAAGTAGCACCACCATTGGTTTTATACCCCTACAAGCGTATGCCTAAAAACGTTGCACCGACTGTGCCATCTGGCTGGGCTATTGGTAACACCGAATCTGGATGGATGAATATGGGTGCTTTTTACGAATATATTACCAACTGTTTCTATCCTTGGCTAGTTACTAATGCAATACCACTTCCAGTCGTATTATTTCTAGATGGCCATACATCACACATATCTCTACCTTTGTCtacattttgtaaagaaaatggTATAATACTTGTAGCTCTATTGCCAAATGCTACTCACGTACTCCAGCCTTTGGATGTTGCAGTATTTCGACCTGTAAAAGGTACTTGGAAGACTGTTGTAAGCGACTTccgaataaaaaataacttttcaaaattGAAGCGAACAGATTTTGCATCACAAGTCAAAATCTGCCTTGATTCTTGTTTAACAGAACAAACTATTGCAAACGGCTTTCGGTCATGTGGAATATATCCTTTCGAgccaaataatgttaattacagaACCCTTCTACCTGAAATTCGGGACGTGACCAGTGACACCGATACTGCAGAGGGTAGTGACAGTAATACAGTTAGCTCTGTTCAAGGTGAATGCCAACCTGCTAAGCAAATGAAAACCTTCAAGCAACTTTTTGAAGACCGTTTGTCACCTTCTGTCTTTCAAGAATTTCAAAGTTCGGGAAATGTATGGAAAGGCGACATCAGCTACAAGAAGCTGTTTGAATATTGGAAGAATATTAAAAGCAATGATGACGATGAAGAACGGAATTTTGAAATTGGAGATACGACTTTAGTAAACAATTTTGCCGATGGAACAGATTTGGATACATTAACATTTGATGAAACACCAGTATTAATTTTACCATCGGAACAAAACGTCTGCCAAGAAATATCTTATTTGACTGTAGACGGCACATTGACGTTTCCAGTAGATCATATTTTACCTGAAGACACTCAAGGCCCAGTAACTAGTCAACGCAGTCAAATTCGATGCGAAAATCTAAAGTCAAATCAAAGTCAAAAGCCAGATTTAATGCGAAAGTCGCCTTTAAGCGAATTTAGGAATTACAaggattttaatttcaatactgCAGATCAAGATCTTAGAACATCATCACCGAAACCACCAACACCATCTCCGAAATCATCAACATCAACTCCGAAACCATCTACACCAACTCTTATACCAGCAATATCGACCCCGAAACCAGCAACATCAACTTCGAAACCAGCAACATCAACTCCGAAACCATCAACATCAACTCCGAAACCATCAACATCAACTCCGAAACCATCAACATCAACTCCAAAACCATCGACATCATCAATTCAAAGTACTAGCGTGATTTTGAACTCTGAATCTCTCAATAGTACTATAATTAATAGATCAGAATATTGCAAAACTCCACTTAAATCTGCTACGACTTCAATCAGTAGAAATGTTCCACAAGAATTGAACATTTCAACACCTTTTAAGAACGCATTATATTTTCCCGAGAATAAGACCACGACGAAAAAGAGAGCATGTAAAAGAGTTACCCCAACTGTCGCAATATCTGATGAATTTATggcatatcaaaaaaaaattgaagcagAAAAATTAcagaaagaagaaaagaaaaggaAACGAATTGAAGATTTggagaagaaaaaaaaagataaattaaacaaacaaggcaATCCAAAATCAAAACAACTAAATAAGGCTAAACGTAAAATAACCAAGGTAGAAGATGCTTCAAAAGAAGCATCCTCCTCGACGACTGATTCCGAAAATGATTTTCAAGTTCAACATATTTCTCAAAGGCGACGTAATAATATGCAGCCGTTTAAGAAACTAAGTTTTGAGACTGCATTACGATCTAAGCAGGATAGCCCTTGCCGAGATACAGCTACATCACAAGATGTGAAcctctataattatgtttcttcaTCAGATGATTGTGAAATAAGCCGTCCAGTAAAAATGCGGCCGAAATATGATTTTGGATTTGATTCAGAGTCAGATGAATCTATTttctaa
Protein Sequence: MDRLKRKQYTAAQLDAALMAITNGASIYETSKKFGIPRTTLRDKRDNKYTNESCGVQTVFTKDEERQLIDWIHYLGRLGFPVTKDQLLETVSKLIETLKRPNPFKDGVPGRHWFQNFLKRHPSIAKRVTQNLPTNRSEVKEEAIRLWFGRVRQYFEQNNLIEVLDDPARIFNCDETGFFLCPKAKQVIVQRGSKKVYTRVANDEKECLIVLVNVAANGKVAPPLVLYPYKRMPKNVAPTVPSGWAIGNTESGWMNMGAFYEYITNCFYPWLVTNAIPLPVVLFLDGHTSHISLPLSTFCKENGIILVALLPNATHVLQPLDVAVFRPVKGTWKTVVSDFRIKNNFSKLKRTDFASQVKICLDSCLTEQTIANGFRSCGIYPFEPNNVNYRTLLPEIRDVTSDTDTAEGSDSNTVSSVQGECQPAKQMKTFKQLFEDRLSPSVFQEFQSSGNVWKGDISYKKLFEYWKNIKSNDDDEERNFEIGDTTLVNNFADGTDLDTLTFDETPVLILPSEQNVCQEISYLTVDGTLTFPVDHILPEDTQGPVTSQRSQIRCENLKSNQSQKPDLMRKSPLSEFRNYKDFNFNTADQDLRTSSPKPPTPSPKSSTSTPKPSTPTLIPAISTPKPATSTSKPATSTPKPSTSTPKPSTSTPKPSTSTPKPSTSSIQSTSVILNSESLNSTIINRSEYCKTPLKSATTSISRNVPQELNISTPFKNALYFPENKTTTKKRACKRVTPTVAISDEFMAYQKKIEAEKLQKEEKKRKRIEDLEKKKKDKLNKQGNPKSKQLNKAKRKITKVEDASKEASSSTTDSENDFQVQHISQRRRNNMQPFKKLSFETALRSKQDSPCRDTATSQDVNLYNYVSSSDDCEISRPVKMRPKYDFGFDSESDESIF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00821749;
90% Identity: iTF_00821757;
80% Identity: -