Hpro010139.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990131.1:5323584-5325383[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 1.4e-07 32.2 0.0 4 38 15 49 15 53 0.91
Sequence Information
- Coding Sequence
- ATGGGCCCACCAGTAAAAAAACGCAAAGTTTGGGACAAAATCAATATGCAAAAAGCTATTGAAGCCGTTAAAACCCGAAAAATGGGTTATAAGAAAGCTGCACAGATTTTTAATGTACCTCGGACTACCCTCTTTCGGTTTTGTCAAAGTAACGAACCGAATATAGATTGCCACCTAGGCCGTAAAACTGTTTTGGGACCTGACATTGAACATATGTTAGTAggttatgtaaaacaaatggaaAAAAGATATTTTGGGTTAACACGAAATGATGTGAAGAGAATGGCATATCAGCTGGCGGTAAGGAATAACCTAAAGCAtccttttaataataaaacagctGGACGTAAATGGTTAAAAGGATTTTTGGCTAGACATAAAGAACTTTCTCTGCGCAAGCCTACTGGTACATCTTTTGCTCGAATTAAAGGCTTTAcgaaagaaaatgttaaatctTTCTTTGATTTACTCGAAATGGAATTCGAACAATGTAAGTTTCCACCAAATAGGATCTACAACGTCGACGAGACTGGGCTTAGCATTGTTCAATCAAAGATACCCAAGGTTTTAGCTACGAAGGGTAAAAAACAAATTGGAACCCTGACTTCCGCCGAAAGAGGGTCTCTCATGACTGTTTGCCTTGCTATGAGTGCAGCCGGAGACTTTGTACCGCCGTTGATTATTTTTCCACGTAAGAAAATGAATATTTTGCTTATGAAAGGAGCACCTATTGGTGCTTTTGCGCGATGCCATTCTTCCGGTTGGATCCAGGCCGACACTTTTCTTGATtggtttaaacattttattcaacATACAAAACCCTCAAAAGAAAACCcagttttattgattttagaTGGCCATTACAGCCACACACGCAACATAAATCTAATTGACCTGGCACGTGAAAATTTTGTGACTATCCTTTGTTTACCGCCGCATTCAACACATAAAATGCAACCTTTAGACAAGACAGTCATGGGCCCTTTGAAATGTTACTATAGCGAAGAAATACGTCAATGGCTTTTAATTAACCAAAGACCTCTTAGCCCTTTCGATGTTGTGGAAATATTTGGGAAGGCTTATCTGAAGATCCAGAACGCAGAGCTAGCTACAAACGGATTTAAGGCAACAGGCATTTATCCACTCAGTAGAAACATTTTCACAGATGCCGATTTTATAACTGAAGAGGATGAATGTCCAGTACACGAGATGTCCACAGCACAAGAGCCAACTCTTGAGATAGAGAATGTTTTAACTAATATCCAGCGTCCAACTACTCCCAccaagaaagaaaatatttctagAGAAATGATTATTAGCCCTGAAGTCATTTCACCGTATCCTCAATTAAAAAGGAAACAATCTAATCGTGGCAGAAAAGCTGGGAGAGCTTGCAAAATTACAGCATCTCCTTATAAAGCTCAATTAGAAGTTAGCGTATCTACTAGCAAGTCGTCGACACAATACAAACAGCAAAAACAGACCTTGCCTGAGCCACAGCCATCAACGAGCGGTTGTAAAAAGagcaagaaaaagaagaaaccAGTGCTGGAGTCTGAATCATCTTCTGATAAAGATACCATATCTTTATCTAGTGATTCTAGTGATGGTAAACCTTCTGTTCTACAACCTAACGATCCAGGCACTGATGCTGAATGCATGTACTGCTCTAGTCTTTTTAGCGAGGATAAAAAGGGAGAAGAGTGGATTCAGTGCATTGCCTGTAGACAATGGAGTCACGTTGAGTGTTCCGGAGCAGAATGTGCTGATTTTATATGTGATTTTTGCTTGCAGGgctaa
- Protein Sequence
- MGPPVKKRKVWDKINMQKAIEAVKTRKMGYKKAAQIFNVPRTTLFRFCQSNEPNIDCHLGRKTVLGPDIEHMLVGYVKQMEKRYFGLTRNDVKRMAYQLAVRNNLKHPFNNKTAGRKWLKGFLARHKELSLRKPTGTSFARIKGFTKENVKSFFDLLEMEFEQCKFPPNRIYNVDETGLSIVQSKIPKVLATKGKKQIGTLTSAERGSLMTVCLAMSAAGDFVPPLIIFPRKKMNILLMKGAPIGAFARCHSSGWIQADTFLDWFKHFIQHTKPSKENPVLLILDGHYSHTRNINLIDLARENFVTILCLPPHSTHKMQPLDKTVMGPLKCYYSEEIRQWLLINQRPLSPFDVVEIFGKAYLKIQNAELATNGFKATGIYPLSRNIFTDADFITEEDECPVHEMSTAQEPTLEIENVLTNIQRPTTPTKKENISREMIISPEVISPYPQLKRKQSNRGRKAGRACKITASPYKAQLEVSVSTSKSSTQYKQQKQTLPEPQPSTSGCKKSKKKKKPVLESESSSDKDTISLSSDSSDGKPSVLQPNDPGTDAECMYCSSLFSEDKKGEEWIQCIACRQWSHVECSGAECADFICDFCLQG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342155; iTF_00287991;
- 90% Identity
- -
- 80% Identity
- -