Hpro002187.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- lolal
- Assembly
- GCA_905147285.1
- Location
- LR990126.1:2737538-2746032[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-17 4.2e-14 53.1 0.0 1 42 323 365 323 368 0.95
Sequence Information
- Coding Sequence
- ATGTCACAGCAATACAGCTTGCGGTGGAACAACCACCAACCAAATTTTATTTCCATGTTCACAAGCCTGCTCAATACACAGACGTTGGTGGACGTGACTCTGGCGGCCGATGGCAAGCAGCTGCTGGCACACAAAGTTGTGCTGTCGGCATGCAGCACATATTTCCAATCATTATTCGTGGACAACCCGTCACCACACCCGATAGTGATTCTTAAAGACGTGACGTACGCCGAGCTCCGCACAATGGTTGACTTTATGTACTGCGGGGAGGTCAATGTCACAGAGGAGCAGCTTCCGAAGGTGCTGGACACCGCAAAGCTGCTGAAAATTAAGGGGCTAACAGAAATGCCTGACTCCACATCACTGACGCGGTCGCAGGGCACGTCTGCCGACCTCCAGGGCGACTCGGACTCGCAGCGGCTGTCGCCGGCTTCATCGCCCTCAGCAAAAAGGAAGAGGCGTAGGAAAAGCTCGAGTGGCTCGAATACGGCCCCGTTAATGGTAGACGAGAGCAGACTGGAGATGGGCGCGCAGTCAGTGGACGCGGTGACCTTGAGCTCCGTGCCGCAGCAGCAGCAACAGCGGCGGGTACGCGAATACAATGAGATAAGGACGATCGACCACGCACAGCAGACTACCGATCATGATAACATGCCGCTGGACCACATGGGATTGGACGTGGCGTCATCGGGGGGGCTATCACAAGGAGGGCATTGGAGTATGATGGACTCATACCCACGTTATACGTCCGCGTGCATTGGTGGCGCGCTGCCGGCGTGCGCCGACGGGGGCATGCCCGGCATGTACAATGTGATGAACACGCATATGGAGGAGATGGGCTACGGGCCGGCGATGGGTGTGCCGCAGCCTTCGCCGGGGCCGTCGTGCGCCGACGCGCCGGCGCCTCCCGAGCCTGTGGCGCACTCTGCGCGTGTCGTTAAGCGCCGCCGCTCCAAGAACCCCCAATCCGAAGAAAACTTTCAGCTTGCACTCGAGGCCGTGCGCGTCGGCGGCATCGGGTTTTGCAAGGCGGCGCGCATGTTCGGGGTTAATAACCGGACGCTGTGGTTGGAGTACAAAAAGAGGGGCTACCCGAACCATCGGCCGAGTATCAAGAGCCGCATCAAGCGTGAGCACACCTCGCCGCCGCCACTCAAAGAAGAGCAGCATTTGCAGGAGCAGCAGATGGGGCTGGTGTGCCCGCAGCATCAGCTGCCGCCGCCCGGCTTCGTGGACACGCCCGGCGCGCACGGCTTTCCCGTTCAAGGCCAGCTCGATCACAACTCAGCGCTCAACCTCAACTTAAACTTCAACTCACTACAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTSLLNTQTLVDVTLAADGKQLLAHKVVLSACSTYFQSLFVDNPSPHPIVILKDVTYAELRTMVDFMYCGEVNVTEEQLPKVLDTAKLLKIKGLTEMPDSTSLTRSQGTSADLQGDSDSQRLSPASSPSAKRKRRRKSSSGSNTAPLMVDESRLEMGAQSVDAVTLSSVPQQQQQRRVREYNEIRTIDHAQQTTDHDNMPLDHMGLDVASSGGLSQGGHWSMMDSYPRYTSACIGGALPACADGGMPGMYNVMNTHMEEMGYGPAMGVPQPSPGPSCADAPAPPEPVAHSARVVKRRRSKNPQSEENFQLALEAVRVGGIGFCKAARMFGVNNRTLWLEYKKRGYPNHRPSIKSRIKREHTSPPPLKEEQHLQEQQMGLVCPQHQLPPPGFVDTPGAHGFPVQGQLDHNSALNLNLNFNSLQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822096;
- 90% Identity
- iTF_00822096;
- 80% Identity
- iTF_00822096;