Basic Information

Gene Symbol
-
Assembly
GCA_905147285.1
Location
LR990155.1:9659823-9674846[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-13 4.9e-10 40.8 0.1 3 89 220 293 218 293 0.89

Sequence Information

Coding Sequence
ATGCTGAGCTTTCACGAGGTCCTAGCCATAAACGACAAGGTAGTCGTGAGAGTTGACGACCTCCTGAGCTGGATATGTTCCGGAGACGATTGGCGCTGGGGACTCCGCGCGGTGTGGCGCGGGGCGTGCGCGCCGCCCGCCGAGCCGCAGGACACGCAGCCGCTGCACCACACCAAGCTTGACTTCAGTGATGTTGACGAGGAGAAAAATGCCATCGCGGAAGACACCGAAGCTCCAGGCGTGGTGGTATTCTCGTACCCTCGGTACTGCCGGTACCGCGCGCTGCTGTCCAGGCTCGAGGGCATCCAGGCAGACTGGCTCAGGGACTCGCTGGTCGCCGCGCTGGGGGGTTACGCTGCGCCCACCAAGAATACTACTATCTTGTATTGTAAGGACACCTTCGAGTACCCAGAGCTGGAAGGGCACGAGTTTGTGTGCAACCACCTAGCCCCGCGGCTGAAGGGGAGGCCCCGCGGCCGCAGGAGACGCGCCCCCCACTCCCCGTCGCCGGGCAGGAGCGATCGCTCCAACACAGAGTCACCGCAAGCTATGTCACCGCAAACTCCCCGCCGAATTTCCCTCCGCAACGGCGCTCCCGAGAGGAACAGTGAAGACGAAGAAGACGACTGCAAAAGACCAGAAGAATCGTCGGAAGACCGAGCCTTCTTGCAGCAGCTGAAGCAGTTTTATAAACTCAGTCACGAACCCTTCAAAAGTGGGCATACGTTGAAAGACTTGTCCCTCCGCGCTCTGTACACAGCAGTGGTGATGCGCGGTGGATATGAATCTGTGTGCAGACACAAGCTATGGAGGACCTTCGCCCAGGACCAGCCTGCCAGGACTAGAAGACATTATGAAAGATTCCTCCTCTCCTTCGAGAACCACGAACGCCGCAGCGGAGTGTGCTCGCTCTTCAAGCTCAACGGCAAACTGGACAACGAACCCCACACCATCGCCACCATCGACGTCACCGACTCCCCCCTCCGCGAGGACTGCGAAAAGATCCTTCGCACCCCCTCCCCTAAGTGCGAAAAAGAAGATTTCCTCACTCCAAAGAACGCAGAAGAATTCAACCGCGAGTTCTTAGAATCTTTGCCTAAAGAAGAGAAATGTGCGAAGATATTTGTGAAGCCCGTGGAGAAAATGGTTGAGCCGAATATGGTGATGTTGTTGGAGGGAAATAGTGAGAAACGAGAGAGCAAAGACGATGTCAAGGATCTGAGTAAGGGCGCTATGTTTATGGGGATTGGGAAACTAAGTATTGATCCAGTGAGCAGAGCAGCTCCCCTCGCTCCTCTCAACGGACACGCACCGCCCGCAGCTGATGCGCCCCCCCGTCCCCCCCTGTCCCGCAGTTCCCTCCGCGCCGTCCGAGTCAAACCTGCCAGACCGGCGCAACGAGCTTCTACCACacCACCGAACCCTCTCCGGCCAGACTCTGCGTCATCGTCCCCCCCTCTCTCATCATCACTGGCGGCGCCCCCCACTGGCCCGCCCCTCAACCCCCCCATCACCAACTTTGGCATTCATCACCCGCCGCAAACCGCGTCTGATGATGATATTGTTGagGTCCCCTACAAACCAAAGACACCAGAAATCATCGACCTAGACGAGTACCCAGAAAGTCCACAAGGCCTCAAAAAGAAGAAACTAGACATCCTAAAAGAACGAGGCCTCGAAGTCACCCCTCTCCCCACGCAATGGAACCCTATCCCCCCCATCATGAACCCCCCCATGATCCTAAACCCCGCCATGCAACACCAAATCATGTCGCAAGCGCAGCTATTCCAAATGTACAATATAATACCACCAAACTACTCCAACGGTATACAACCACCAAAAATATTCCAAGGTTCCTCAATCTTCGGTTCCGCTGGCCCTGAAAAGACTGTCTACGGCAACCCAAAAGACCCCTTCATGCCCCCCCCACATGTTCTACATGGTGCGCCAGTTAAACCTCTAAGAAATGTAACTACAACCAGCTCGACTCCTCAGGATTGTTTAGACTTGACTTGCAAATCGAGTAGTTCTCCGGGTAAACCAGCTGTGGAAATCCTGAGGGTTTCTTGTCCCTCCCCGAAGTCTACAGCTCAAAATTTGTCTAAGAACTACACGTTAATTGACGGCAAAGCTGTCGTCGGATCCAATTTGGAAATAACGCTAGTAAACAAAGCGCATAGTCCAACCAAATCATGTCCAAGACCGCCTCAGAAGCGTTCCTCAAATGGCAAATTCATATCGACTAAAACTCCAACCCCTCCTAAAGATTTTCCCAAATTTCCGTCAGTTACCCCCCCAAATGTGGCCAAGAAGCCGGCTATAACCATTCCTAATTACCAAATTCGTGAAGATTCGTCTCCTAATAGTTCAAAACAACAACTGAAGGCCCAGAACGTTCAAAGTCAGATAATGGATTTGCAGAAAAATGCTGGGCCGATGTCATCTTTTATAGATCCTTATACAGTAGCCTTATATAGTTCTTTAGCCGGTCAGATGGACCAGAGACAATTGGCTATGTATAGAGATCTAATGACTAACCAATTCAGGGGATACCCGGGGCTCCTTAACCTCGGGGTATCAAACACACCGACAACGAAAAATTAG
Protein Sequence
MLSFHEVLAINDKVVVRVDDLLSWICSGDDWRWGLRAVWRGACAPPAEPQDTQPLHHTKLDFSDVDEEKNAIAEDTEAPGVVVFSYPRYCRYRALLSRLEGIQADWLRDSLVAALGGYAAPTKNTTILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPHSPSPGRSDRSNTESPQAMSPQTPRRISLRNGAPERNSEDEEDDCKRPEESSEDRAFLQQLKQFYKLSHEPFKSGHTLKDLSLRALYTAVVMRGGYESVCRHKLWRTFAQDQPARTRRHYERFLLSFENHERRSGVCSLFKLNGKLDNEPHTIATIDVTDSPLREDCEKILRTPSPKCEKEDFLTPKNAEEFNREFLESLPKEEKCAKIFVKPVEKMVEPNMVMLLEGNSEKRESKDDVKDLSKGAMFMGIGKLSIDPVSRAAPLAPLNGHAPPAADAPPRPPLSRSSLRAVRVKPARPAQRASTTPPNPLRPDSASSSPPLSSSLAAPPTGPPLNPPITNFGIHHPPQTASDDDIVEVPYKPKTPEIIDLDEYPESPQGLKKKKLDILKERGLEVTPLPTQWNPIPPIMNPPMILNPAMQHQIMSQAQLFQMYNIIPPNYSNGIQPPKIFQGSSIFGSAGPEKTVYGNPKDPFMPPPHVLHGAPVKPLRNVTTTSSTPQDCLDLTCKSSSSPGKPAVEILRVSCPSPKSTAQNLSKNYTLIDGKAVVGSNLEITLVNKAHSPTKSCPRPPQKRSSNGKFISTKTPTPPKDFPKFPSVTPPNVAKKPAITIPNYQIREDSSPNSSKQQLKAQNVQSQIMDLQKNAGPMSSFIDPYTVALYSSLAGQMDQRQLAMYRDLMTNQFRGYPGLLNLGVSNTPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-